mRNA_P-fluviatile_contig8.14637.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: D8LKW1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW1_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.870e-34 Identity = 133/359 (37.05%), Postives = 164/359 (45.68%), Query Frame = 1
Query: 1 QVNGFVA-TGGVVAGRSAVSMSSLTQGSSSPMKTSPRWAKTSFELG-STYAEYMATRMLQHNSKCAQAQENEPPDTF--YRFRLEKQAKMPPPEKEKSLYEEYS--RSASHEFGVSAPGASHAAPAPAXXX-----VKELSPYEEYMASRNKLNAAAAKTTPEEKXXXXXXXXXXXXXXATEGVAPADCAEEECDADEVVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KPEEIKKVSEFESYAAKRLVGEAAEAAMPSTEKAAAAHDNRVQSRSVGAAQDAAPGAKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKRN 1041
+ +GFV TG VV+GRSAVSMSSLTQGSSSP S RWA +S +L S Y EYMA R + + K + ++ F Y EK A +P R+ + GV P A XXX KELSPYEEYM S+NK+ A A TT EEK T G AP DC EEECDADE+ EQ P E++ VS+ +K A+ D+ + ++S G++ APG H GTGGMADTRDPAP+ H DPRKSI+AAP+FAEYLKSK+N
Sbjct: 22 RADGFVCPTGRVVSGRSAVSMSSLTQGSSSPPPQSSRWATSSSKLNISPYEEYMALRQKKDSGKTVTPEADQQISLFDSYTSSREKTAALPXXXXXXXXXXXXXXXRATVTDPGVGRPAAPXXXXXXXXXXXXXXPAKELSPYEEYMQSKNKVKAVEAATTFEEKAKSSVYADYMASRTETTGAAPVDCVEEECDADELQEQGGLFASYMASRGMQVEAIDSVVPEIECEDEEECTAEEELSFYESYMRSRNKVTEAAATVTPAEVETVSQXXXXXXXXXXXXXXXXXXXXXQKQASMFDDYMSTQSSGSSSKTAPG--HKGTGGMADTRDPAPVNHADPRKSISAAPSFAEYLKSKKN 378
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A6H5JPP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP9_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 4.060e-16 Identity = 134/361 (37.12%), Postives = 161/361 (44.60%), Query Frame = 1
Query: 1 QVNGFVATGGVVAGRSAVSMSSLTQGSSSPMKTSPRWAKTSFELGST-YAEYMATRMLQHNSKCAQAQENEPPDTFYRFRLEKQAKMPPPEKEKSLYEEYSRSASHEFGVSAPGASHAAPAPAXXXVK----------ELSPYEEYMASRNKLNAAAAKTTPEEKXXXXXXXXXXXXXXATEG---VAPADCAEEECDADEVVEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPEEIKKVSEFESYAAKRLVGEAAEAAMPSTEKAAAAHDNRVQSRSVGAAQDAAPGAKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKRN 1041
Q +GFV G V R+A S SSLT+ S + TS RWA +S +L S+ Y EYM TR + + + E F ++ + E+ APAPA ELSPYEEYM SRNK+ AA A TT EEKXXXXXXXXXXXX A E V ADC EEEC A+EV ++ XXXXXXXXXXXX + + +K ++ S++ PG H GTGGMADTRDPAP+KHEDPRKSI AAP+FAEYLKSKRN
Sbjct: 23 QADGFV-VGPVAPVRTAGSSSSLTKAS---LGTSSRWATSSSKLQSSPYEEYMRTRQQKESGMAVSPEAEEKASMFDSYQASRN------EQXXXXXXXXXXXXXXXXXXXXXXXXXPAPAPAAPSAXXXXXXXXXSTELSPYEEYMQSRNKIKAAEAATTFEEKXXXXXXXXXXXXRRAKESGSDVPVADCVEEECSAEEVEQEAGLFASYMAGIKVEATTEEQVSYYDSHMASRKHVKDANADVTPQEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAL-------FDDFQKESSPTPTTTSSKTP-------PG--HKGTGGMADTRDPAPVKHEDPRKSIPAAPSFAEYLKSKRN 357
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: D7G2R1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R1_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 3.690e-12 Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 1
Query: 913 GAKHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKRN 1041
G KH+GTGGMADTRDP L HEDPRKSI+AAP+FAEYLKSK+N
Sbjct: 167 GEKHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 209
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: D7G2R0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 9.800e-11 Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 1
Query: 919 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKRN 1041
KH+GTGGMADTRDP L HEDPRKSI+AAP+FAEYLKSK+N
Sbjct: 374 KHIGTGGMADTRDPDALDHEDPRKSISAAPSFAEYLKSKQN 414
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A835YLE0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.970e-10 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 919 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKR 1038
KH G GGMADTRDP P+ HEDPRKSI+ APTF EY+K K+
Sbjct: 34 KHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 73
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A835YTB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.970e-10 Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 919 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSKR 1038
KH G GGMADTRDP P+ HEDPRKSI+ APTF EY+K K+
Sbjct: 36 KHRGVGGMADTRDPEPVDHEDPRKSISKAPTFEEYMKQKQ 75
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A7S2MQH4_9STRA (Hypothetical protein (Fragment) n=3 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MQH4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.760e-9 Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 1
Query: 922 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSK 1035
H+G+GGMADTRDP ++HEDPRKSI+AAP+F EYLKS+
Sbjct: 33 HIGSGGMADTRDPDAMEHEDPRKSISAAPSFEEYLKSR 70
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A7S1Z902_9STRA (Hypothetical protein (Fragment) n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z902_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.150e-9 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 922 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSK 1035
H+G+GGMADTR+P L HEDPRKSI+AAP+F EYLKS+
Sbjct: 34 HIGSGGMADTRNPDALNHEDPRKSISAAPSFEEYLKSR 71
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A835YPW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPW3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.060e-8 Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 1
Query: 922 HVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSK 1035
H+GTGGMADTR+P P HEDPRKSI+ APTF EYLK +
Sbjct: 147 HIGTGGMADTRNPDPKDHEDPRKSISRAPTFEEYLKQR 184
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Match: A0A7S2BTZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTZ6_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.730e-8 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 919 KHVGTGGMADTRDPAPLKHEDPRKSIAAAPTFAEYLKSK 1035
+HVG GGM DTRDP + HEDPRKSI+AAP+F EY+K +
Sbjct: 75 EHVGKGGMVDTRDPEVMTHEDPRKSISAAPSFEEYMKQR 113 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14637.1 >prot_P-fluviatile_contig8.14637.1 ID=prot_P-fluviatile_contig8.14637.1|Name=mRNA_P-fluviatile_contig8.14637.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=329bp MSSLTQGSSSPMKTSPRWAKTSFELGSTYAEYMATRMLQHNSKCAQAQENback to top mRNA from alignment at P-fluviatile_contig8:3413405..3424365- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14637.1 ID=mRNA_P-fluviatile_contig8.14637.1|Name=mRNA_P-fluviatile_contig8.14637.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10961bp|location=Sequence derived from alignment at P-fluviatile_contig8:3413405..3424365- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3413405..3424365- >mRNA_P-fluviatile_contig8.14637.1 ID=mRNA_P-fluviatile_contig8.14637.1|Name=mRNA_P-fluviatile_contig8.14637.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1974bp|location=Sequence derived from alignment at P-fluviatile_contig8:3413405..3424365- (Porterinema fluviatile SAG_2381)back to top |