prot_P-fluviatile_contig79.14268.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig79.14268.1
Unique Nameprot_P-fluviatile_contig79.14268.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length157
Homology
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 4.700e-56
Identity = 97/156 (62.18%), Postives = 116/156 (74.36%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVPVSTFTTSNGLPSLEC 156
            M D+GIA+LES  A I+DN ID  +FGIR SLGS  N VYDN FN+ S +GLYTY GSD P   VSNGRP   T+NNN+VT++  GVKFK+SD    TNN FTGT E EF+DAQ T WSGN++P G C+D ITSDDG  VP STF++S+G+PS EC
Sbjct:  312 MPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD--VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSSSSGVPSEEC 465          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.990e-50
Identity = 88/157 (56.05%), Postives = 115/157 (73.25%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVPVSTFTTSN-GLPSLEC 156
            M+D+G+AMLESM A IY+N   + +FGIR SLGS+ N V++N F +VST GLYTYQGSD PT GVS+GRP +  + NNR+ +   GVK K+ D    T+N+FTGT+E EFFDAQ+T W GNT+P+G C+  I SDDG+ + +STF     GLP+LEC
Sbjct:  367 MQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 3.370e-36
Identity = 78/156 (50.00%), Postives = 101/156 (64.74%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVPVSTFTTSNGLPSLEC 156
            M D+GIAMLE+ G  I+DN +D   FGIR  LGS+NN V+DN F N+   G++TY GSD P   V  GRP +  + NN +  T  GVK K+SD  + TNN F+GTTE EF +A D  WSGN++P  TC++ I ++       STFT S+GLP LEC
Sbjct:  302 MGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPW--VGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNN-------STFTGSSGLP-LEC 447          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 2.130e-30
Identity = 69/146 (47.26%), Postives = 89/146 (60.96%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCV------DIITSDDGMPV 140
            M+D+GIAMLES  A+IY N+I+  ++GIR SLGS NN VY NSF ++S YGLYTY+GSD P   VS+GRP       N V D PIGVK K+ D      N F     FEF ++ +T WSGN +  G C+      D  +  D +P+
Sbjct:  742 MQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD--VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIPI 884          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 1.030e-27
Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   65 VSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVPVSTFTTSNGLPSLEC 156
            VSNGRP   T+NNN++T+T  GVK K+SD    +NN FTGT E EFFDAQ T WS N++P G C+D +TSDDG  VP STF++S+G+PS EC
Sbjct:  277 VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSSSSGVPSEEC 368          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.930e-27
Identity = 58/135 (42.96%), Postives = 89/135 (65.93%), Query Frame = 0
Query:    7 AMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVP 141
            A++ES  A IYDN I+  ++GIR SLGSA+N ++DN+F++ STYGLYTY+GSD P    ++GR K+ +++ N +++T + +K K+ D  + TNN+F     FEF D+ DT W+ N +  G C+D  T      +P
Sbjct:  710 ALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGG-CLDESTDFASGSIP 843          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 2.930e-26
Identity = 62/124 (50.00%), Postives = 82/124 (66.13%), Query Frame = 0
Query:    7 AMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNTVPRGTCVD 130
            A LES  A IYDN I   ++GIR SLGS +N + +N+F+N+S YGLYTY+GSD P   VSNGRPK   +  N V++T IGV  K+ D     NN+FT    FEF  ++DT W+GN++  G C+D
Sbjct:  544 AFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPD--VSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGG-CLD 664          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: D8LDB5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB5_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 4.200e-19
Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVS-NGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLF---TGTTEFEFFDAQDTFWSGNTVPRGTCV------DIITSDDGMP 139
            M+D+G+A++ESMGA IYDN     ++GIR S+G++ N+V +N F+    YG+YTYQG+D P      +G   + T++ N V     GVK + ++    T+N F   +   E+ F D +D  W+ N VP G C+      D   S D +P
Sbjct:  758 MEDAGMAIMESMGAHIYDNTFTNVKYGIRLSVGASRNVVENNKFSECDQYGIYTYQGNDEPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIAFTDNKFYEHSSGEEYRFEDCEDVVWTNNLVPDGICLKGDDNTDYFKSYDSLP 903          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.870e-16
Identity = 49/146 (33.56%), Postives = 78/146 (53.42%), Query Frame = 0
Query:    3 DSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNNLFTGTTEFEFFDAQDTFWSGNT--------VPRGTCVDIITSDDGMPV 140
            D+G+A++ES  A + +N  +  ++G+R S+G A+N+   N  ++ S Y +YTY+GSD P   V +GR ++  +++N +T     +K   +D     +N F       F DAQDT  SGNT        V +G C D  +  D  PV
Sbjct:  180 DAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWV-VDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPV 324          
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Match: A0A6H5J9X8_9PHAE (MEP24 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X8_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.890e-15
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 0
Query:    1 MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTYGLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSD 93
            M+D+G+A+LES+ A IY+N   + +FGIR SLGS++N V++N F           +GSD PT GVS+G P +  + N R+ +   GVK K+ D
Sbjct:    1 MQDTGMALLESINADIYNNEFSSVKFGIRLSLGSSDNHVHENLFE----------EGSDEPTDGVSDGHPSDNLFGNKRILNAAKGVKIKEGD 83          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig79.14268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGU8_9PHAE4.700e-5662.18MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LRM4_ECTSI2.990e-5056.05Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D7FRR8_ECTSI3.370e-3650.00Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI2.130e-3047.26Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FIU4_ECTSI1.030e-2759.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWE8_ECTSI1.930e-2742.96Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRN0_ECTSI2.930e-2650.00Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LDB5_ECTSI4.200e-1936.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ9_9PHAE6.870e-1633.56Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5J9X8_9PHAE1.890e-1543.01MEP24 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 3..105
e-value: 1.5E-7
score: 31.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..148
e-value: 2.1E-8
score: 35.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig79contigP-fluviatile_contig79:310625..312189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig79.14268.1mRNA_P-fluviatile_contig79.14268.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig79 309390..313274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig79.14268.1 ID=prot_P-fluviatile_contig79.14268.1|Name=mRNA_P-fluviatile_contig79.14268.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=157bp
MKDSGIAMLESMGARIYDNVIDTTRFGIRQSLGSANNMVYDNSFNNVSTY
GLYTYQGSDPPTRGVSNGRPKNITYNNNRVTDTPIGVKFKDSDTQTATNN
LFTGTTEFEFFDAQDTFWSGNTVPRGTCVDIITSDDGMPVPVSTFTTSNG
LPSLEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence