mRNA_P-fluviatile_contig12.1358.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: D7FWX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX5_ECTSI) HSP 1 Score: 291 bits (745), Expect = 6.510e-91 Identity = 153/172 (88.95%), Postives = 164/172 (95.35%), Query Frame = 1
Query: 1 MRAAALMLVGLGG-AAAAAADSVSAYHMSCHGVYNKIARQAMGDIKELQSRVDAGEMCPALGQKADSICNQALEQFSTDAADTENDPAKEAIFDEKVEELETALDLPLQLVYMKQLTLLREKALQRYKTLAKGTETSDYQAMVAADQWFVKEAEASTRAGASWEFAAVRNSL 513
M+A LM +GL G AA AA+DSVSAYHMSCHGVYNKIARQAMGDIKELQ+RVD+GE CPALG+KADSICNQALEQFSTDAADTENDP KE+IFDEKVEELET+LDLPLQLVYMKQLTLLREKALQRYKTLAKG+ETSDYQAMVAADQWFVKEAEASTRAG+SWEF+AVRNSL
Sbjct: 1 MKATCLMFLGLAGRAAGAASDSVSAYHMSCHGVYNKIARQAMGDIKELQTRVDSGEACPALGEKADSICNQALEQFSTDAADTENDPTKESIFDEKVEELETSLDLPLQLVYMKQLTLLREKALQRYKTLAKGSETSDYQAMVAADQWFVKEAEASTRAGSSWEFSAVRNSL 172
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A835YIM6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM6_9STRA) HSP 1 Score: 201 bits (512), Expect = 1.720e-56 Identity = 102/166 (61.45%), Postives = 130/166 (78.31%), Query Frame = 1
Query: 16 LMLVGLGGAAAAAADSVSAYHMSCHGVYNKIARQAMGDIKELQSRVDAGEMCPALGQKADSICNQALEQFSTDAADTENDPAKEAIFDEKVEELETALDLPLQLVYMKQLTLLREKALQRYKTLAKGTETSDYQAMVAADQWFVKEAEASTRAGASWEFAAVRNSL 513
L L G AAAA+ + Y ++CH V+ K+ AM DI L+S+V+ GE+CP LG KAD+ICNQALEQFS++A D END A E+IFDEKVEELE LD+PLQ+VY++QL L+REKALQRYK AKG+ETSDYQAM+AADQ++ KEAE+STR G+ W++A R+SL
Sbjct: 10 LAAAALAGTAAAASANPDMYSLTCHKVFCKVTASAMKDIDALKSKVEGGELCPGLGAKADAICNQALEQFSSEAPDAENDDALESIFDEKVEELEKTLDMPLQMVYLRQLALIREKALQRYKAAAKGSETSDYQAMIAADQFYAKEAESSTRQGSGWDYARERSSL 175
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A7S1H297_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H297_9STRA) HSP 1 Score: 154 bits (389), Expect = 6.450e-40 Identity = 77/115 (66.96%), Postives = 93/115 (80.87%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ MN +A+ GKKATD +++AQQ TAMQ+LQ QQQ + LQ QLYG Q +PWN G AYRIPDTN NL G+YQQGK N+Q++CVPDEY+ MLG GFT+GVGPGNLGLS+NLSI
Sbjct: 90 QSVMNSIAESGKKATDVQMKSAQQQQTAMQFLQSQQQMIQQLQMQLYG-QNTPWNVGFAYRIPDTNFNLQGSYQQGKTNVQLSCVPDEYAPMLGPSGFTNGVGPGNLGLSLNLSI 203
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A7S2KKJ0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KKJ0_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.860e-39 Identity = 77/115 (66.96%), Postives = 92/115 (80.00%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ M+E A KK T+ V+++QQ STAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQG+ANLQ++CVPDEY+ MLG GFT+GVGPGNLGLS+NLSI
Sbjct: 42 QSIMSEFATTHKKLTETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANLQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSI 155
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: B8CCD1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCD1_THAPS) HSP 1 Score: 154 bits (388), Expect = 5.020e-39 Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
QT M+E AQ KK T+ V+++QQ STAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQG+AN+Q++CVPDEY+ MLG GFT+GVGPGNLGLS+NLSI
Sbjct: 151 QTVMSEFAQTTKKLTETQVKSSQQQSTAMQFLQHQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPMLGPNGFTNGVGPGNLGLSLNLSI 264
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A6V2EIW0_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EIW0_9STRA) HSP 1 Score: 152 bits (383), Expect = 6.970e-38 Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ MN+MAQ KK D +++A Q STAMQYLQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQG+ N Q++CVPDEY+ +LG GFT+GVGPGNLGLS+NLSI
Sbjct: 190 QSVMNDMAQTSKKLIDVQMKSANQQSTAMQYLQQQQQMIQQLQMQLYG-QSSPWNVGLAYRIPDTNFNLQGSYQQGRGNFQLSCVPDEYAPLLGPNGFTNGVGPGNLGLSLNLSI 303
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A7S0ACT7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ACT7_9STRA) HSP 1 Score: 143 bits (360), Expect = 6.360e-37 Identity = 70/115 (60.87%), Postives = 91/115 (79.13%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ MN++A KK D +++A++ TA+Q+LQ QQQ + LQ QLYG Q +PWN G AYRIPDTN NL G+YQQG+ NLQ++CVPDEY+ MLG+ GFT+GVGPGNLGLS+NLS+
Sbjct: 6 QSVMNDVASTRKKLIDVQMKSAEKHQTALQFLQQQQQIIQQLQMQLYG-QTAPWNVGVAYRIPDTNFNLQGSYQQGRTNLQLSCVPDEYAPMLGANGFTNGVGPGNLGLSLNLSL 119
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: B7G8P6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8P6_PHATC) HSP 1 Score: 148 bits (373), Expect = 1.970e-36 Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ MN +A+ +KA D + +AQQ TAMQ+LQ QQQ + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQG+AN+Q++CVPDEY+ LG GFT+GVGPGNLGLS+NLS+
Sbjct: 195 QSVMNNIAESSRKAMDVQMNSAQQQQTAMQFLQSQQQMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPFLGPNGFTNGVGPGNLGLSLNLSV 308
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A448Z9H7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9H7_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.650e-36 Identity = 79/134 (58.96%), Postives = 98/134 (73.13%), Query Frame = 3
Query: 459 SEHSGG-GFVGIRRSAKQPQTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
SE GG F G R + QT MN +A+ G+KAT+ +++AQQ TAMQ+LQ + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQG+AN+Q++CVPDEY+ LG GFT+GVGPGNLGLS+NLS+
Sbjct: 178 SEADGGWDFTGERAAL---QTVMNRLAESGQKATEVQMKSAQQQQTAMQFLQXXXXMIQQLQMQLYG-QSSPWNVGVAYRIPDTNFNLQGSYQQGRANVQLSCVPDEYAPFLGPNGFTNGVGPGNLGLSLNLSV 307
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Match: A0A1E7FQ76_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQ76_9STRA) HSP 1 Score: 144 bits (362), Expect = 6.200e-35 Identity = 71/115 (61.74%), Postives = 86/115 (74.78%), Query Frame = 3
Query: 513 QTAMNEMAQRGKKATDAAVRAAQQTSTAMQYLQMQQQQLSALQNQLYGGQPSPWNFGAAYRIPDTNINLSGTYQQGKANLQMTCVPDEYSSMLGSQGFTHGVGPGNLGLSVNLSI 857
Q+ MN +A+ KA D + +A Q TAMQ+LQ Q Q + LQ QLYG Q SPWN G AYRIPDTN NL G+YQQGK N+Q++CVPDEY+ LG GFT+GVGPGNLGLS+NLS+
Sbjct: 192 QSVMNRLAESSNKAQDIQISSASQQQTAMQFLQSQAQMIQQLQQQLYG-QASPWNVGVAYRIPDTNFNLQGSYQQGKTNVQLSCVPDEYAPFLGPSGFTNGVGPGNLGLSLNLSV 305 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig12.1358.1 >prot_P-fluviatile_contig12.1358.1 ID=prot_P-fluviatile_contig12.1358.1|Name=mRNA_P-fluviatile_contig12.1358.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=175bp MRAAALMLVGLGGAAAAAADSVSAYHMSCHGVYNKIARQAMGDIKELQSRback to top mRNA from alignment at P-fluviatile_contig12:535152..544372- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig12.1358.1 ID=mRNA_P-fluviatile_contig12.1358.1|Name=mRNA_P-fluviatile_contig12.1358.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9221bp|location=Sequence derived from alignment at P-fluviatile_contig12:535152..544372- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig12:535152..544372- >mRNA_P-fluviatile_contig12.1358.1 ID=mRNA_P-fluviatile_contig12.1358.1|Name=mRNA_P-fluviatile_contig12.1358.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1050bp|location=Sequence derived from alignment at P-fluviatile_contig12:535152..544372- (Porterinema fluviatile SAG_2381)back to top |