mRNA_P-fluviatile_contig78.14193.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig78.14193.1
Unique NamemRNA_P-fluviatile_contig78.14193.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML3_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 9.550e-142
Identity = 211/245 (86.12%), Postives = 217/245 (88.57%), Query Frame = 2
Query:  731 LRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGRRSQAVQRLKIRRTSGRSRLPEHAVKGRMVYNAKYLDCYSKGVLG 1465
            +RASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTA EVRGVGE+ERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQN SGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGV LNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWG RSQAVQRLK +   G    P    +G      + L    +G LG
Sbjct:  105 IRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAAEVRGVGEEERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNRSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVHLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLG 349          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KI50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI50_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.400e-110
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 1
Query: 1354 IENQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSQCDDETGGDVGNPQFDIDKHRRTWGRTMDGFS*LEALADDPLQQEERSKELGLVAPDASGLKLPLYHAMRIVPGDHVPVERLHFDAL 1890
            ++NQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVS  DDETGGDVGNPQFDIDKHRRT GRTMDGFS LE LADDPLQQEERSKELGLVAP+ASGLKLPLYHAMRIVPGDHVPVERLHFDAL
Sbjct:   31 LKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEVLADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDAL 209          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 5.040e-109
Identity = 176/202 (87.13%), Postives = 181/202 (89.60%), Query Frame = 1
Query: 1285 VGKQAFHWRLLLWLGSAKPSGATIENQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSQCDDETGGDVGNPQFDIDKHRRTWGRTMDGFS*LEALADDPLQQEERSKELGLVAPDASGLKLPLYHAMRIVPGDHVPVERLHFDAL 1890
            +G   F W      G    +   ++NQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVS  DDETGGDVGNPQFDIDKHRRT GRTMDGFS LEALADDPLQQEERSKELGLVAP+ASGLKLPLYHAMRIVPGDHVPVERLHFDAL
Sbjct:   62 IGGSYFDW------GWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDAL 257          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KJ80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ80_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 2.340e-91
Identity = 149/179 (83.24%), Postives = 153/179 (85.47%), Query Frame = 1
Query: 1354 IENQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSQCDDETGGDVGNPQFDIDKHRRTWGRTMDGFS*LEALADDPLQQEERSKELGLVAPDASGLKLPLYHAMRIVPGDHVPVERLHFDAL 1890
            ++NQTHVGTLATP ARS+GENGL CEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDG GRSKCLGTKAPNN SKFPCSYCM                     HRRTWGRTMDGFS LEALADDPLQQEERSKELGLVAP+ASGLKLPLYHAMRIVPGDHVPVERLHFDAL
Sbjct:   79 LKNQTHVGTLATPEARSQGENGLHCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGRGRSKCLGTKAPNNCSKFPCSYCM---------------------HRRTWGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDAL 236          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 5.750e-86
Identity = 144/228 (63.16%), Postives = 175/228 (76.75%), Query Frame = 1
Query: 1267 CVQRLGVGKQAFHWRLLLWLGSAKPSGATIENQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSQCDDETGGDVGNPQFDIDKHRRTWGRTMDGFS*LEALADDPLQQEERSKELGLVAPDASGLKLPLYHAMRIVPGDHVPVERLHFDALTS*RIS*RTTHLSLGATSGR 1950
            C   +G     + WR         P+   +++QTHVGTLA+PGA S+GE GLQCEILGLLQ+GCLGR  L DE+GA  E+EVFVRGGLLLMCGDG GRSK LGTKAPN++SK PC+YCMVSQ DD+TGGD+GNP+FDIDKHRRTWG+  DG S L+ALAD P +Q+ RS++LGLV PDASGL LPLY AMRIVP ++VPVERLHFDAL   ++  +   L + +T+GR
Sbjct:  106 CKHSIGGSYFGWAWRT--------PAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLQKGCLGRCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLC-QVFFLEMLSTTGR 324          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5K2F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F5_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 1.720e-85
Identity = 135/142 (95.07%), Postives = 136/142 (95.77%), Query Frame = 2
Query:  872 FRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNK 1297
            F TA EVRGVGE+ERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQ SSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGV LNDMNLAFYSAPVVFSC AFN WGLGNK
Sbjct:  413 FGTAAEVRGVGEEERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQKSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVHLNDMNLAFYSAPVVFSCGAFNTWGLGNK 554          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 5.300e-85
Identity = 148/254 (58.27%), Postives = 175/254 (68.90%), Query Frame = 2
Query:  731 LRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGRRSQAVQRLKIRRTSGRSRLPEHAVKGRMVYNAKYLDCYSKGVLGGVSSETSKG 1492
            +RA VCGRKVYV+D C CEV GV TL R++EIFYD  RRLVLVTVRLFR   EVRGVG +ERRGGLLRVWE C+    +EL+A +VLGLVEMETP   +   GHP+PWDRF+ EGFV   GTKR  Q +A PKPF V+E+ W AEG  ++PL+G+R +GV LNDMNL +YSAP VF CDAFNA+G+G KHSIGGSYFGW  R+ AVQRL  R   G    P    +G      + L     G LG       +G
Sbjct:   66 IRARVCGRKVYVNDTCVCEVEGVATLCRILEIFYDGERRLVLVTVRLFRGVSEVRGVGNEERRGGLLRVWEGCT--CKLELKANEVLGLVEMETPHEMAA-AGHPYPWDRFFGEGFVRQTGTKRALQSNARPKPFAVTESSWCAEGPANRPLWGLRREGVHLNDMNLPYYSAPTVFHCDAFNAFGMGCKHSIGGSYFGWAWRTPAVQRLNHRTHVGTLASPGACSQGETGLQCEILGLLQNGCLGRCKLTDEEG 316          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5KJM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM6_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 5.710e-83
Identity = 148/238 (62.18%), Postives = 180/238 (75.63%), Query Frame = 1
Query: 1237 LLRSCGVQLRCVQRLGVGKQAFHWRLLLWLGSAKPSGATIENQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSQCDDETGGDVGNPQFDIDKHRRTWGRTMDGFS*LEALADDPLQQEERSKELGLVAPDASGLKLPLYHAMRIVPGDHVPVERLHFDALTS*RIS*RTTHLSLGATSGR 1950
            +LR C     C  +  +G   F W    W     P+   +++QTHVGTLA+PGA S+GE GLQCEILGLLQ GCLGR  L DE+GA  E+EVFVRGGLLLMCGDG GRSK LGTKAPN++SK PC+YCMVSQ DD+TGGD+GNP+FDIDKHRRTWG+  DG S L+ALAD P +Q+ RS++LGLV PDASGL LPLY AMRIVP ++VPVERLHFDAL   ++  +  +L + +T+GR
Sbjct:  585 ILRLCTCMRCCGSQHSIGGSYFGWA---W---RTPAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLQNGCLGRCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDALGQSQLC-QVFYLEMLSTTGR 815          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5K0J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J4_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 5.770e-80
Identity = 146/254 (57.48%), Postives = 176/254 (69.29%), Query Frame = 2
Query:  731 LRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGRRSQAVQRLKIRRTSGRSRLPEHAVKGRMVYNAKYLDCYSKGVLGGVSSETSKG 1492
            +RA VCGRKVYV+D C CEV GV TL R++EIFYD  RRLVLVTVRLFR   EVRGVG +ERRGGLLRVW+DC+    +EL+A  VLGLVEMETP   +   GHP+PWDRF+ EGF+   GTK+  Q +A PKPF V+E+PW AEG  + PL+G+R +GV LN+MNL +YSAP VF CDAFNA+G+G KHSIGGSYFGW  R+ AVQRLK +   G    P    +G      + L     G LG       +G
Sbjct:  356 IRARVCGRKVYVNDTCVCEVEGVATLCRILEIFYDGERRLVLVTVRLFRGVSEVRGVGNEERRGGLLRVWKDCT--CKLELKANDVLGLVEMETPHEMAA-AGHPYPWDRFFGEGFLRQTGTKQALQSNARPKPFAVTESPWCAEGPANSPLWGLRREGVHLNNMNLPYYSAPTVFHCDAFNAFGMGCKHSIGGSYFGWAWRTPAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLGNGCLGRCKLTDDEG 606          
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 2.480e-77
Identity = 141/258 (54.65%), Postives = 174/258 (67.44%), Query Frame = 2
Query:  731 LRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLVLVTVRLFRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVEMETPQNSS----GDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGRRSQAVQRLKIRRTSGRSRLPEHAVKGRMVYNAKYLDCYSKGVLGGVSSETSKG 1492
            +RA VCGRKVYV+D C  EV GV+TL R+++IFYD+ R+LV+VTVRLFR   EVRGV ++ERRGGLLRVWEDC+    VEL+A  VLGLVEMETP   +      GGH FPWDRF  EGFV   GTKR  Q   +PKPF VSE+PW  EG  ++PL+G+R  GV  ND +L F+SA +VF+CDAFNA+G+G KHS+GGSYFGW  R+ AVQRLK +   G    P    +G +    + L     G LG       +G
Sbjct:  435 IRARVCGRKVYVNDTCVAEVEGVVTLCRMLKIFYDEARQLVIVTVRLFRGVSEVRGVRQEERRGGLLRVWEDCTADGEVELKADAVLGLVEMETPHEMAPAGGSQGGHNFPWDRFVGEGFVRRTGTKRPLQSSDLPKPFTVSESPWCMEGPAERPLWGLRRSGVHFNDTDLPFFSASLVFNCDAFNAFGMGCKHSVGGSYFGWAWRAPAVQRLKHQSHVGTLASPGACCRGEIGLQCEVLGLLQNGCLGRAKLTDQEG 692          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig78.14193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KML3_9PHAE9.550e-14286.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI50_9PHAE2.400e-11095.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLQ7_9PHAE5.040e-10987.13Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ80_9PHAE2.340e-9183.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU21_9PHAE5.750e-8663.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2F5_9PHAE1.720e-8595.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX1_9PHAE5.300e-8558.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM6_9PHAE5.710e-8362.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0J4_9PHAE5.770e-8057.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE2.480e-7754.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig78contigP-fluviatile_contig78:144279..147363 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons4
Model size1973
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig78.14193.1prot_P-fluviatile_contig78.14193.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig78 145068..146660 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817204.8856785-UTR-P-fluviatile_contig78:144278..1443611622817204.8856785-UTR-P-fluviatile_contig78:144278..144361Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 144279..144361 -
1693571509.1449273-UTR-P-fluviatile_contig78:144278..1443611693571509.1449273-UTR-P-fluviatile_contig78:144278..144361Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 144279..144361 -
1622817204.895665-UTR-P-fluviatile_contig78:144714..1450671622817204.895665-UTR-P-fluviatile_contig78:144714..145067Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 144715..145067 -
1693571509.1638591-UTR-P-fluviatile_contig78:144714..1450671693571509.1638591-UTR-P-fluviatile_contig78:144714..145067Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 144715..145067 -
1622817204.9468882-UTR-P-fluviatile_contig78:146660..1473631622817204.9468882-UTR-P-fluviatile_contig78:146660..147363Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 146661..147363 -
1693571509.2085226-UTR-P-fluviatile_contig78:146660..1473631693571509.2085226-UTR-P-fluviatile_contig78:146660..147363Porterinema fluviatile SAG_2381UTRP-fluviatile_contig78 146661..147363 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817204.9071746-CDS-P-fluviatile_contig78:145067..1450951622817204.9071746-CDS-P-fluviatile_contig78:145067..145095Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 145068..145095 -
1693571509.179033-CDS-P-fluviatile_contig78:145067..1450951693571509.179033-CDS-P-fluviatile_contig78:145067..145095Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 145068..145095 -
1622817204.922511-CDS-P-fluviatile_contig78:145501..1457131622817204.922511-CDS-P-fluviatile_contig78:145501..145713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 145502..145713 -
1693571509.1886835-CDS-P-fluviatile_contig78:145501..1457131693571509.1886835-CDS-P-fluviatile_contig78:145501..145713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 145502..145713 -
1622817204.9359868-CDS-P-fluviatile_contig78:146066..1466601622817204.9359868-CDS-P-fluviatile_contig78:146066..146660Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 146067..146660 -
1693571509.1981246-CDS-P-fluviatile_contig78:146066..1466601693571509.1981246-CDS-P-fluviatile_contig78:146066..146660Porterinema fluviatile SAG_2381CDSP-fluviatile_contig78 146067..146660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig78.14193.1

>prot_P-fluviatile_contig78.14193.1 ID=prot_P-fluviatile_contig78.14193.1|Name=mRNA_P-fluviatile_contig78.14193.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp
MASLLSSCILRASVCGRKVYVHDCCACEVGGVLTLGRLMEIFYDDVRRLV
LVTVRLFRTAVEVRGVGEDERRGGLLRVWEDCSPGSGVELEAAKVLGLVE
METPQNSSGDGGHPFPWDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAP
WHAEGTTDKPLFGVRHQGVLLNDMNLAFYSAPVVFSCDAFNAWGLGNKHS
IGGSYFGWGRRSQAVQRLKIRRTSGRSRLPEHAVKGRMVYNAKYLDCYSK
GVLGGVSSETSKGRDRRKRCLCVVVCC*
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mRNA from alignment at P-fluviatile_contig78:144279..147363-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig78.14193.1 ID=mRNA_P-fluviatile_contig78.14193.1|Name=mRNA_P-fluviatile_contig78.14193.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3085bp|location=Sequence derived from alignment at P-fluviatile_contig78:144279..147363- (Porterinema fluviatile SAG_2381)
ATTTTCCTCACTTCCTCACGTGGTTCAACCACACCACACTGCCAGTGCTG TCCAAGGTACCCATCGTCTTCGGTCTCTTTAATTCCTGAGTTGGCGTCAT CGCTGAGCCGTGGTCCGGTCCGCGAGATCGCGTGCGTATGCTGGACGCTC TCTATCCCGTTGACAGCAGTCGTCTAATAATATGTCGCGCTCTCCACGCT CTCTGTCGAAGATGGTGCCGGTACTTGGTCACACGGTCCACAACACAACA CGCGCGAGGAACGGACGTTCCCTCTTCACTTCAACCTTGGTAGAGCACGC GACAGAGGCGTACACTCTCACGATAAATGCTGACCTACTCCTTGATGCTG CTGTGCATTCGCTGTTCGGATGCTACATGGTGGATCCTCAACACCCTTAA CTTGTCAAACGTGGTGCCATCTGGTACCACGAAAACTACAACACATTTCT TGACCAACACATTGCATCCTCGGTTGCCACAGCTGTGTCGTCCCAGAAAC TCTAGACTAGACTATACTTTTGGATCCTTGCTCGATAGGCTCTGTCTGGG CCTGTGTACTTTCACTTGAAAAATAGTGCATGCCATCACGACTATTTGTA TCTAGACTAGTCTAGACTAAAGCGAACGAATCAATCCCTGGAAAGATAGG TGTTTAGTTCCGACCGCGCCGGTTAGCATCGACTAACCCCGCTGGGCTGT CGAATGGCTTCTCTATTAAGTTCGTGTATTCTACGAGCAAGCGTGTGTGG GAGAAAAGTATACGTTCACGACTGCTGCGCGTGCGAGGTCGGGGGGGTGC TTACCCTAGGTCGGTTGATGGAGATTTTCTACGATGATGTACGCCGTTTG GTGCTAGTAACCGTACGGCTGTTCAGGACGGCGGTCGAGGTGCGGGGCGT GGGCGAAGACGAGAGACGAGGAGGGTTGTTGCGAGTGTGGGAGGACTGTT CCCCCGGCAGCGGTGTGGAGTTGGAAGCTGCCAAGGTTCTGGGCTTGGTG GAGATGGAGACGCCTCAGAACAGCAGTGGGGACGGCGGGCACCCCTTCCC TTGGGACCGCTTTTACGCGGAAGGGTTTGTAACAGCGGCCGGCACTAAAC GCCGCCACCAGGGCGACGCCATGCCGAAACCGTTCAAAGTGTCCGAGGCG CCCTGGCACGCGGAGGGGACGACCGATAAGCCGCTCTTTGGGGTGAGACA TCAAGGCGTACTCCTCAACGACATGAATCTTGCCTTCTACTCCGCTCCTG TGGTGTTCAGCTGCGATGCGTTCAACGCCTGGGGGTTGGGAAACAAGGTG AGAGTGGTTGTGTCCTCTCGGTGAAACTCAATCGCAGATCAGTGCTGTAG ATATTGTAAGAGCTGTAGATGTTGTAAGAGGCCGAAGTATACTCAGGGCC GTACCCCGAGTGGACGACATAAATTGTTCAAACATTCAACGTGATGAAAA ATATCGGGGGTTGTTTTGTATTTTTGTAATGAGGTAATGTTTGGTTTTTG GGACGGACGAAATAATAATGTTGGGGGCTTCGTGTCTTTTCTTGATTAAT TTGTGATTTATGGGACGCTTTTTTTACTTGATTTTTGGTTTATGGGACGC AAATTCGACTCCCTCATAGGTCCTCGCGCATGGTACATCTTTTTCCGCAG CATTCCATTGGAGGCTCCTACTTTGGCTGGGGTCGGCGAAGCCAAGCGGT GCAACGATTGAAAATCAGACGCACGTCGGGACGCTCGCGACTCCCGGAGC ACGCAGTGAAGGGGAGAATGGTCTACAATGCGAAATACTTGGACTGCTAC AGCAAGGGTGTCTTGGGCGGCGTGTCCTCAGAGACGAGCAAGGGGCGAGA TCGGAGGAAGAGGTACGGTGGACAATTGGTGTTGTAGTATTTCGAATCCT CACCCCCACTCTATTTGTAAGCGATAGGCTTTCGTAAGCAAGCACCTGCG GAATCGCCCCGCGCGTCAGCGCGAATTCGAACCCACCCTGTCGGGATGTC GTGCGTGACACTCTGTCGGGTCTTCTGTCCTTCGGTGTGTTCGACGATCA AGCCAAGTCGTCCTTTTGCTGCAGGCGTTGGCGCGAGGTTACCTTTCTAT TCCCCATGGATGGTCGGTCGAGGCGTCTACGTTGAAGTAGATGGGTATGG TTTCCTCGGGCAACGCCGTGCGCATGAAACGCTTGAACGGGCTCGGGTAC CAACACTAACCCGCCAACTTTTGAACCGCTTACACCACTAATGCTGCTGT CTCCTTGCCACTCGACAGGTGTTTGTGCGTGGTGGTTTGTTGCTGATGTG TGGGGATGGACCCGGGCGCTCGAAATGCCTAGGCACGAAGGCTCCGAACA ACTTTTCCAAGTTCCCCTGCTCCTATTGCATGGTGAGCCAGTGCGACGAC GAAACCGGCGGGGATGTCGGCAACCCTCAGTTCGACATCGACAAGCACCG GCGCACTTGGGGCCGGACGATGGACGGCTTCTCGTAGCTGGAAGCGCTTG CGGATGATCCCCTCCAACAGGAGGAACGCTCTAAAGAGTTGGGTCTGGTT GCACCGGACGCGTCGGGACTCAAGTTACCTCTGTACCATGCCATGCGCAT TGTTCCGGGGGACCACGTACCCGTCGAGCGTCTGCACTTCGACGCGCTGG TGAGCGAGCATGATGTTTATCCTGCGTGTGAGAGACCAGCTGGACTCACC CCTTTTGACCAAAACCTGGAACTAGAAATGCTATGGCCGCCAGAGTGTGG GCTCGCGAAACCGTGGACTTCGTGCCGTTATTTCGATAACCCTGTCACTT TGTTAGCTGTGTGCAACCCGTTTTATCCTTGCTACCCGTTTTCTCGTTGC TTGGCGGCAACCCTACCTCCGTTTCCACTCTATTTAGGGGCAATGTCAGC TGTGCCAGGTTTTCTGCTTGGAACTACTCTCGAAGAAAGGTCGCCGGCTA GTCTCAGCCATCATGGCTCAGAAGTCGTCTTTGCTGTACCCACCCGGCAC AGACAAGCTAAAGGATATCCTGACGGACTACCCATCTCTCACTGGGAGCG ACAAGTGGACGCTGCAATCGATCATGCTCCTCGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig78:144279..147363-

>mRNA_P-fluviatile_contig78.14193.1 ID=mRNA_P-fluviatile_contig78.14193.1|Name=mRNA_P-fluviatile_contig78.14193.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1668bp|location=Sequence derived from alignment at P-fluviatile_contig78:144279..147363- (Porterinema fluviatile SAG_2381)
ATGGCTTCTCTATTAAGTTCGTGTATTCTACGAGCAAGCGTGTGTGGGAG
AAAAGTATACGTTCACGACTGCTGCGCGTGCGAGGTCGGGGGGGTGCTTA
CCCTAGGTCGGTTGATGGAGATTTTCTACGATGATGTACGCCGTTTGGTG
CTAGTAACCGTACGGCTGTTCAGGACGGCGGTCGAGGTGCGGGGCGTGGG
CGAAGACGAGAGACGAGGAGGGTTGTTGCGAGTGTGGGAGGACTGTTCCC
CCGGCAGCGGTGTGGAGTTGGAAGCTGCCAAGGTTCTGGGCTTGGTGGAG
ATGGAGACGCCTCAGAACAGCAGTGGGGACGGCGGGCACCCCTTCCCTTG
GGACCGCTTTTACGCGGAAGGGTTTGTAACAGCGGCCGGCACTAAACGCC
GCCACCAGGGCGACGCCATGCCGAAACCGTTCAAAGTGTCCGAGGCGCCC
TGGCACGCGGAGGGGACGACCGATAAGCCGCTCTTTGGGGTGAGACATCA
AGGCGTACTCCTCAACGACATGAATCTTGCCTTCTACTCCGCTCCTGTGG
TGTTCAGCTGCGATGCGTTCAACGCCTGGGGGTTGGGAAACAAGATGGCT
TCTCTATTAAGTTCGTGTATTCTACGAGCAAGCGTGTGTGGGAGAAAAGT
ATACGTTCACGACTGCTGCGCGTGCGAGGTCGGGGGGGTGCTTACCCTAG
GTCGGTTGATGGAGATTTTCTACGATGATGTACGCCGTTTGGTGCTAGTA
ACCGTACGGCTGTTCAGGACGGCGGTCGAGGTGCGGGGCGTGGGCGAAGA
CGAGAGACGAGGAGGGTTGTTGCGAGTGTGGGAGGACTGTTCCCCCGGCA
GCGGTGTGGAGTTGGAAGCTGCCAAGGTTCTGGGCTTGGTGGAGATGGAG
ACGCCTCAGAACAGCAGTGGGGACGGCGGGCACCCCTTCCCTTGGGACCG
CTTTTACGCGGAAGGGTTTGTAACAGCGGCCGGCACTAAACGCCGCCACC
AGGGCGACGCCATGCCGAAACCGTTCAAAGTGTCCGAGGCGCCCTGGCAC
GCGGAGGGGACGACCGATAAGCCGCTCTTTGGGGTGAGACATCAAGGCGT
ACTCCTCAACGACATGAATCTTGCCTTCTACTCCGCTCCTGTGGTGTTCA
GCTGCGATGCGTTCAACGCCTGGGGGTTGGGAAACAAGCATTCCATTGGA
GGCTCCTACTTTGGCTGGGGTCGGCGAAGCCAAGCGGTGCAACGATTGAA
AATCAGACGCACGTCGGGACGCTCGCGACTCCCGGAGCACGCAGTGAAGG
GGAGAATGGTCTACAATGCGAAATACTTGGACTGCTACAGCAAGGGTGTC
TTGGGCGGCGTGTCCTCAGAGACGAGCAAGGGGCGAGATCGGAGGAAGAG
CATTCCATTGGAGGCTCCTACTTTGGCTGGGGTCGGCGAAGCCAAGCGGT
GCAACGATTGAAAATCAGACGCACGTCGGGACGCTCGCGACTCCCGGAGC
ACGCAGTGAAGGGGAGAATGGTCTACAATGCGAAATACTTGGACTGCTAC
AGCAAGGGTGTCTTGGGCGGCGTGTCCTCAGAGACGAGCAAGGGGCGAGA
TCGGAGGAAGAGGTGTTTGTGCGTGGTGGTTTGTTGCTGAGTGTTTGTGC
GTGGTGGTTTGTTGCTGA
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