mRNA_P-fluviatile_contig77.14145.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig77.14145.1 vs. uniprot
Match: D7FHX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHX2_ECTSI) HSP 1 Score: 250 bits (639), Expect = 4.650e-73 Identity = 175/429 (40.79%), Postives = 213/429 (49.65%), Query Frame = 1
Query: 43 SRKRQLPLHLDKWIVTVREGKNLTRGDRRESFFTRMSPVCELSIGGQGPFATSVKPNTTQPSWNDSIEFEAQRFPYSSSTSSQRLSDRRLKGYSSDDDDVRNKGDGETATPTAAGPKLRLVCYSRSGPARSNIGRAELTLVAAGDGLGGRDDGSRKFHRVPLKRMDARGCQVAAGTIVLEYMLVPGIPRMSLPSTAVPAECPVETASSSRGALLQLQEAGDGVRVVVGGXXXGDVHLLDDVPRINTARKPALLALLGAVVAIIVAVXXXXXXXXXXXXXXXXXXXLGLSPIPVPFKLAAGKHRGSSTHHIRLQEDGNVVVAMGPRPS-AAVVTAAGDGGGAAVLWQSGPLGSLSESKXXXXXXXXXXXXXXXXXXXXXXXXXXXGICKKCQVQAGKDGSLALVRGREELEVFSPRWAGAFFDVAPRRDK 1326
S KRQLP+HLDKW++TVREGK+LTRG+ + FF +MSPVCEL++G QGPF+T VK NTTQP W+DSIEF+A TA L R+P G QV AG+++LEYMLVPGIP+ P + E + ++ A + DG R VG ++ ARKPALLA +GAV+A ++AV LSPIPVPFK+A GKH+GSSTHHIRLQ DGNVVVA GP+P A AAGD G A LWQSGPL SL++ + XXXX CKKCQV+ K+G+LAL RGREEL VFSP W AFFD+ PR DK
Sbjct: 3 SPKRQLPMHLDKWVITVREGKDLTRGEAND-FFRKMSPVCELTLGSQGPFSTGVKLNTTQPCWDDSIEFDA---------------------------------------ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDL-----------RLPTVGPKLEGSQVPAGSVILEYMLVPGIPQPVAP-VSTETEGSLSGLAARTTAPFREDGGNDGSRGGVGSCCMDELK--------KPARKPALLACVGAVIAAVLAVRLSGVCSARMPTD--------LSPIPVPFKVAVGKHKGSSTHHIRLQGDGNVVVARGPKPLLTAGAAAAGDAG--ATLWQSGPLPSLTQQQQRSPGKPGDNGKDKSGGXXXXS-------CKKCQVKVTKEGTLALTRGREELAVFSPAWTEAFFDIPPRGDK 354 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14145.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig77.14145.1 >prot_P-fluviatile_contig77.14145.1 ID=prot_P-fluviatile_contig77.14145.1|Name=mRNA_P-fluviatile_contig77.14145.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp MGPSRKRQLPLHLDKWIVTVREGKNLTRGDRRESFFTRMSPVCELSIGGQback to top mRNA from alignment at P-fluviatile_contig77:221419..229771- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig77.14145.1 ID=mRNA_P-fluviatile_contig77.14145.1|Name=mRNA_P-fluviatile_contig77.14145.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8353bp|location=Sequence derived from alignment at P-fluviatile_contig77:221419..229771- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig77:221419..229771- >mRNA_P-fluviatile_contig77.14145.1 ID=mRNA_P-fluviatile_contig77.14145.1|Name=mRNA_P-fluviatile_contig77.14145.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2598bp|location=Sequence derived from alignment at P-fluviatile_contig77:221419..229771- (Porterinema fluviatile SAG_2381)back to top |