mRNA_P-fluviatile_contig76.14083.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig76.14083.1
Unique NamemRNA_P-fluviatile_contig76.14083.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 2.120e-109
Identity = 171/224 (76.34%), Postives = 193/224 (86.16%), Query Frame = 3 
Query:  534 MVGSTAGLAIVAAAFFGAASCRALMVHTPMTLSAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            MV ST  L  +A+  F  ASC A +V TP TLSA+P  TST+ RMSAG+DY+++LPGAPF DGK+WDP+GLSS+AD EDIKKWREAEIKHGRVAMLASVGVLVAENFHP FLG +YIGPA+ HF+EITARFPQFWA+TLLAIA+LEYRQI+IGFAE DPVTGEGG+R+DYVPGDLGFDPLGLAP D  EL  MKTKELN+GRLAMIGI GM+VQELV P PI G
Sbjct:   52 MVTSTGALVGMASWCF--ASCEAFIVPTPTTLSARP--TSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 5.700e-89
Identity = 136/192 (70.83%), Postives = 158/192 (82.29%), Query Frame = 3 
Query:  630 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            SA P  +S++++MSAG+DY+A+LPGAPF DGKI+DPL LS  AD  DIKKWREAEIKHGRVAMLAS+GVLVAE +HP F+G +YIGPAVDHFQEI+A++P+FW  +LL +AF+EY  I   F  P  VTGEGGL+ DYVPGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGMLVQEL+NPA ILG
Sbjct:   29 SAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.540e-87
Identity = 134/192 (69.79%), Postives = 162/192 (84.38%), Query Frame = 3 
Query:  630 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            SA P  ++++++MSAG+DY+A+LPGAPF DGKI+DPL LS  A+  +IK WREAEIKHGRVAMLA+VGV+VAE +HP F+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I+  +AEP PVTGEGGLR +Y PGDLGFDPL L P D   L+ M+TKELNNGRLAMIGIAGMLVQELVNPA ILG
Sbjct:   30 SAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 3.370e-81
Identity = 127/191 (66.49%), Postives = 151/191 (79.06%), Query Frame = 3 
Query:  630 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 1202
            SA P   +++++MSAG+DY+A+LPGAPF DGKI+DPL LS  A   DIKKWREAEIKHGRVAMLAS+G+LVAE +HP F+G ++IGPA+ HFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P     L  MKTKELNNGRLAMIGIAGML QELVN   IL
Sbjct:   29 SAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 5.910e-80
Identity = 131/198 (66.16%), Postives = 158/198 (79.80%), Query Frame = 3 
Query:  615 TPMTL-SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            TPM + SA P  ++++++MSAGTDY+A+LPGA   +GKI+D L L+  AD  +IK WREAEIKHGRVAMLA+VGV+VAE +HPFF+G +YIGPAVDHFQEITA+FPQFWA +LL +AF+EY  I   +AEP PVTGEGGLR +Y PGDLGFDP  + P D   L+ M+ KELNNGRLAMIGI GMLVQELVN   ILG
Sbjct:   24 TPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 8.820e-74
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 3 
Query:  723 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            +I+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE +HPFF+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.630e-73
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 3 
Query:  723 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 1202
            KI+DPLGL+  A+  DIK WREAEIKHGRVAMLAS+GVLVAE +HPFF+G +YIGPAVDHFQEI+ARFP+FWA +LLA+A +EY  I+  +AEP  VTGEGGLR +Y PGDLGFDPL L PTD   L+ M+TKELNNGRLAMIGIAG LVQELVNP  IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 5.690e-71
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 3 
Query:  723 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            +I+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE +HPFF+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.890e-64
Identity = 115/187 (61.50%), Postives = 129/187 (68.98%), Query Frame = 3 
Query:  645 PTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 1205
            P+S  ++MSAG+DY+A+LPGAPF DGKI+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE                            FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:   34 PSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.030e-61
Identity = 103/187 (55.08%), Postives = 138/187 (73.80%), Query Frame = 3 
Query:  651 STSVRMSAGTDYIASLPGAPF---PDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 1202
            S++ +M+AG+DY ASLPGAPF    +GK +DP GL++  D E IKKWREAE+KHGRV+MLA+VG+LV+E FHP F+G  YIGPAV+H Q+I   +P FW  +L  IAF+E + I   +    PVTG G L+ +Y PGDLGFDPLGLAP D  + + ++++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:   38 SSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5B4_ECTSI2.120e-10976.34Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q6_ECTSI5.700e-8970.83Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S1_ECTSI2.540e-8769.79Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q9_ECTSI3.370e-8166.49Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
D7G7S0_ECTSI5.910e-8066.16Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7S5_ECTSI8.820e-7472.67Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D7G7Q7_ECTSI2.630e-7373.13Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
A0A6H5JWB4_9PHAE5.690e-7172.67LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5K8D0_9PHAE1.890e-6461.50LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
D7FQG7_ECTSI1.030e-6155.08Light harvesting complex protein n=2 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:200668..204626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.4
Seed ortholog evalue1.6e-91
Seed eggNOG ortholog2880.D7G5B4
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-14_006900.1
Exons5
Model size1997
Cds size675
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817193.13151-UTR-P-fluviatile_contig76:200667..2012001622817193.13151-UTR-P-fluviatile_contig76:200667..201200Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 200668..201200 +
1693571461.6571176-UTR-P-fluviatile_contig76:200667..2012001693571461.6571176-UTR-P-fluviatile_contig76:200667..201200Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 200668..201200 +
1622817193.2059753-UTR-P-fluviatile_contig76:203837..2046261622817193.2059753-UTR-P-fluviatile_contig76:203837..204626Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 203838..204626 +
1693571461.7127724-UTR-P-fluviatile_contig76:203837..2046261693571461.7127724-UTR-P-fluviatile_contig76:203837..204626Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 203838..204626 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817193.143556-CDS-P-fluviatile_contig76:201200..2013721622817193.143556-CDS-P-fluviatile_contig76:201200..201372Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 201201..201372 +
1693571461.667015-CDS-P-fluviatile_contig76:201200..2013721693571461.667015-CDS-P-fluviatile_contig76:201200..201372Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 201201..201372 +
1622817193.1536877-CDS-P-fluviatile_contig76:201729..2018721622817193.1536877-CDS-P-fluviatile_contig76:201729..201872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 201730..201872 +
1693571461.6749737-CDS-P-fluviatile_contig76:201729..2018721693571461.6749737-CDS-P-fluviatile_contig76:201729..201872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 201730..201872 +
1622817193.1638572-CDS-P-fluviatile_contig76:202379..2024631622817193.1638572-CDS-P-fluviatile_contig76:202379..202463Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 202380..202463 +
1693571461.682946-CDS-P-fluviatile_contig76:202379..2024631693571461.682946-CDS-P-fluviatile_contig76:202379..202463Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 202380..202463 +
1622817193.1792152-CDS-P-fluviatile_contig76:203012..2032251622817193.1792152-CDS-P-fluviatile_contig76:203012..203225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 203013..203225 +
1693571461.6915293-CDS-P-fluviatile_contig76:203012..2032251693571461.6915293-CDS-P-fluviatile_contig76:203012..203225Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 203013..203225 +
1622817193.1929328-CDS-P-fluviatile_contig76:203774..2038371622817193.1929328-CDS-P-fluviatile_contig76:203774..203837Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 203775..203837 +
1693571461.7020392-CDS-P-fluviatile_contig76:203774..2038371693571461.7020392-CDS-P-fluviatile_contig76:203774..203837Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 203775..203837 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14083.1prot_P-fluviatile_contig76.14083.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig76 201201..203837 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig76.14083.1

>prot_P-fluviatile_contig76.14083.1 ID=prot_P-fluviatile_contig76.14083.1|Name=mRNA_P-fluviatile_contig76.14083.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=225bp
MVGSTAGLAIVAAAFFGAASCRALMVHTPMTLSAQPIPTSTSVRMSAGTD
YIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVG
VLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQI
SIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNN
GRLAMIGIAGMLVQELVNPAPILG*
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mRNA from alignment at P-fluviatile_contig76:200668..204626+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig76.14083.1 ID=mRNA_P-fluviatile_contig76.14083.1|Name=mRNA_P-fluviatile_contig76.14083.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3959bp|location=Sequence derived from alignment at P-fluviatile_contig76:200668..204626+ (Porterinema fluviatile SAG_2381)
ACTCGATCTTCGAGCCGCCGTCCAACCGCGACATCCGTACTAAAGCTGAA
ATCCCAATAGGTTAGGTCCGTGAAAGCCAGGTCAGCTTTGCATCACATTA
TTTTCAGTTGGATTTCCGCTCGCCCAAGGATGTGGGTCTGCGCATGTTGT
AGACATCTTAAACCTTTTTGAAAAAGGTATGCGCGGGGTGCATGCATGTA
CGGCAGTTCTTGAGCCTCTGAGTTCAAGCTATGGGACAAGATGGGCGAGT
GGTGCAGTCTTGTGGACAGCAGTTGCTCAGGCTGAGGCCGTTTTGCGTTA
GAAAGCGGTCAAAGCGCTCATGAGTCCAAAAGAGACGAGAGAGCGCAAGA
CAGTCTGGAGGCGGAAGAGAACGTATTTTATTACATACATGCAATCTCGC
CGCACGTGTCTGCACCGCTTCGTTTCTCCTTTCTCCATGCTGTTGCGCTC
TCGAGGGCGCGTTCGGGACACGGCCTGAAGAAAATGCGTAGACAAGCTCA
CGATTTTTGTGCCCCCAAGGTGAACTCTGAAGGATGGTCGGCTCGACGGC
GGGCCTTGCGATAGTGGCGGCGGCTTTCTTCGGCGCAGCAAGTTGCCGGG
CCTTGATGGTACACACACCGATGACCCTCTCAGCCCAACCAATACCAACA
TCGACCTCCGTCCGCATGTCAGCTGGCACGGACTATATCGCCAGTCTCCC
TGGAGGTGAGGCAGATCTCTATGTACCTGGGGCCATTGCGAAAATTTGCA
TTGGTAGGAGTCGAGCCAGCGGGGGCTTTCACGAAAGAATATTTCAGCAT
CCGCTGACCCTGGATGCAAACCGACTTCGAGGAGGTACCGCGGTAGACTA
GAGTCTACAGATCGTCAGAGGAGAAATCCCAGTTTGATTGCACGGATGTA
AGGAAATGGCACTACTCCAGCAAGTAAAGAAATTCACCTGCGTCTGTAAA
ATTGAATTTTTCAACTCAAACTAGCAATGCGCAGTCGAAGTTAACTGGCA
GCAGCTGGCTCTCTCTGTAACGCCTTCGCACTACGGCTGTACCACTTCTG
TATCACCCACAGCTCCCTTCCCAGACGGTAAGATTTGGGACCCCCTGGGA
CTGTCATCAAAGGCGGATACTGAGGACATCAAGAAGTGGCGCGAGGCTGA
GATCAAGCACGGGCGCGTCGCCATGCTAGCGTCAGTGGGTGTCCTCGTAG
CTGAGGTGAGGATGCATATAAATGCCGATGATGTTATGTGTATGCACGAC
TACTTGTAGCATCACGTGTACGCGGCCGGCCCTGTACTACTGCACATCGC
TGATCCAACTGTTGTACACAGTACCATTATTTTCTTAGTATATCCTCACG
AGGACCTGTGTTCGAGGCAGAAACTCCTGCTAAATCCGGGAATGCAGCTA
TTTTAGCTACCAGCTGGAGTCTCGGTGTTGTAAGGGTTGAAGCACGGTCG
ATGTCATACAGTTGAAGCAGCGACCGAATTTGTTTACTGATTCGTATTGT
TGCTATTCCAGGTTCACCCCTGGAACTGCTACATGTTGATATGTCAACGC
GCGGTTACTCGGTATCTCACAATGGCCCAGCCTCGTGATGGACGCCGACC
TGTAAATTTCGCGTTTTCTGGCCCAATGTTGAACCTCCGACGTTCCACAT
TTTTTCCAAATCCCGCTTGTTTTCACTTAGTGCTCTCCATTTGCTTCCTT
CCTTCGTTCCAGAACTTCCATCCGTTCTTCCTCGGTGGAAATTACATCGG
CCCTGCTGTCGACCACTTTCAGGAGATAACGGCACGCTTCCCTCAGGTAA
TGAGCGCTGCAACTCCGCTTGCGCTTAAGCGGTTGCGGAATCAAACGCGA
GATCGTTGCGTGTAGTCCATTTGCAGGCACAAGGCGTGCTTTTCGTTTTC
CCAGCTCGCTCTGTTAGCCGACTATTACAAACTGCATGCAAATCGATGTG
CACCCCCAGAGTTGTAGTTTTATGATAGCCTCTTCGACGCGAAGCGATAC
CCAAGGTCGAACCACTTGTACAGTTGCAAGATCGATCGGAGGTTGATAAT
TGGTCGACTACTCGAATGCTGATCGACAACTGACTCAAAGGATGGTTGCA
ACAGCGAAGAGTGTGGCTCCCACCACACTTCTAAAGCACCGTTCGTGCTG
ATTCATCTACCTCTGGCCGTTGTTTGGAAGCACATCAATGACTGGCTATT
GGCTGCAAGGTAATCCCCTCTTGGTCCCCGCGGAGGGAGTGTCCCTTGAG
GGCAGACTGATCCACCCATGCCTCCATCATAATGCATCCCATCCCATCCC
ATCCCATCCCATCCCATTTTCTGCACGGCACGAACTCCGAGTCAGTTTTG
GGCGGTCACCTTGCTCGCCATCGCCTTCCTCGAGTACCGCCAGATCAGCA
TCGGCTTCGCTGAGCCGGACCCTGTGACGGGCGAGGGCGGGCTGCGAGTA
GACTACGTGCCAGGGGACCTTGGCTTCGACCCGCTCGGGCTCGCGCCGAC
AGACTCGGTGGAGCTCAAGGCCATGAAGACAAAGGAGCTCAACAACGGCC
GCCTCGCCGTGAGTGTATGTATGTGCGTGTGCGTGTTTTTCCTACCGTGC
GGCTTCGCGGCGTCGCGAGCATGTCTCGAAGCAAGCGGTCGACGGAATTG
GTGCAAGATATCATGGGTGCGCGATGCTTTTTCGAGGCTCTGACGCAAGC
GCACGACGCTTGTAAGTGTGAAAGGATGGGGCGCTGCGTGCGTTCACCGG
TGCAAAGAGGTTGGAAAAGTTTGGCGCGGGTATCGAATTTTGAGCCGGTT
AGGTGGCGTGAAAACCACTTTCGGCACCCCTCGTAAAGTGCGGTCTGTCA
GCCCCTTGTTTGTCAATCGATCCCTCGCGTAGTTTGAGTTTTTATCTCGC
TTTCGGGTGGGTAAGCGTTCGCTCGACTCAACTTTACAGCAGTCAGTCAC
TCTATGGTGCGTAGACCCCGCGCCTCCTAGTAGATCTACTGGAGTACGTC
CATATGGTGCGATAGTAGTATCAAATGGCCAAGCACGCTCCTGTGTGCCG
CTTTCAGACATCGAGCAGCACGCGTCTTTTTGTTCCCGTCCTTGAAAACT
CTCACAGATGATTGGTATCGCGGGCATGCTCGTCCAAGAACTGGTCAATC
CGGCGCCCATCCTAGGATGAGCGCTGAGTTCTACTATGCACAAGGTCGGC
GCTTGAGCACAATGCTCAGGCCGTATGATTTTTTTCCCGCATAAGTTTCG
TTCCTTATAGAAATCCCTAGAGTAGGAATTGACGCTTTCTTCCATTTTTT
GCACGTGCACCCTTCCGTTTCATGCATGAGGTCTTGAAATCCAAGCGCCG
TCGTCAGCCCGATTAGACCAGGGATTGTGGCGCGCGAGGACGAAGCTGAA
TGCCATTTTCCAGTCAGAGATATCCATCGCATGTGCCGGTAACAGCGCAG
CGTGCACTGGCAAGCTTGTCGTACCTGGTGCTCTTTGTGTTCACGCTGGG
GACCACGGGCGCCAACCGGTGTGGCGCAGGTTGATATCGTGTCTTCGTTT
TCCGGGGCGATTGGTCGCCCCGCAGGTTTGGCTGGTGACGCCGAAAGTCG
TTTCGTCTGTGAAAGGGAGCCTTCCCGAAGCAGCGCTCGGGTCCGAGGGT
AGTAGCGCACACAACCCGACGAATCAGGGTGCGGGGGCGTGTCGCCAGCT
GCGTGTGTCAAATGCAAGCCTGACATGCATCTGTCTTCATTTTTTCTCTG
AGTGATTCGCGGCGACTGGGTCGTTACTCCGAATCCACGCCAACCTGTTT
TGGGCACTTCGACCCCGGTGCTTCAAGAAGTGTCCGTTTGGAAGTATATC
TGAGGGGGCCACCTGACTGATTTACTGGGAATCCCGCGTCGAAAATTAAG
GAAAACACAGCAGCGAATAAGCGGTGGGGAGGGATAATATCACCTAGCGC
TACCATGCT
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Coding sequence (CDS) from alignment at P-fluviatile_contig76:200668..204626+

>mRNA_P-fluviatile_contig76.14083.1 ID=mRNA_P-fluviatile_contig76.14083.1|Name=mRNA_P-fluviatile_contig76.14083.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1350bp|location=Sequence derived from alignment at P-fluviatile_contig76:200668..204626+ (Porterinema fluviatile SAG_2381)
ATGGTCGGCTCGACGGCGGGCCTTGCGATAGTGGCGGCGGCTTTCTTCGG
CGCAGCAAGTTGCCGGGCCTTGATGGTACACACACCGATGACCCTCTCAG
CCCAACCAATACCAACATCGACCTCCGTCCGCATGTCAGCTGGCACGGAC
TATATCGCCAGTCTCCCTGGAGATGGTCGGCTCGACGGCGGGCCTTGCGA
TAGTGGCGGCGGCTTTCTTCGGCGCAGCAAGTTGCCGGGCCTTGATGGTA
CACACACCGATGACCCTCTCAGCCCAACCAATACCAACATCGACCTCCGT
CCGCATGTCAGCTGGCACGGACTATATCGCCAGTCTCCCTGGAGCTCCCT
TCCCAGACGGTAAGATTTGGGACCCCCTGGGACTGTCATCAAAGGCGGAT
ACTGAGGACATCAAGAAGTGGCGCGAGGCTGAGATCAAGCACGGGCGCGT
CGCCATGCTAGCGTCAGTGGGTGTCCTCGTAGCTGAGCTCCCTTCCCAGA
CGGTAAGATTTGGGACCCCCTGGGACTGTCATCAAAGGCGGATACTGAGG
ACATCAAGAAGTGGCGCGAGGCTGAGATCAAGCACGGGCGCGTCGCCATG
CTAGCGTCAGTGGGTGTCCTCGTAGCTGAGAACTTCCATCCGTTCTTCCT
CGGTGGAAATTACATCGGCCCTGCTGTCGACCACTTTCAGGAGATAACGG
CACGCTTCCCTCAGAACTTCCATCCGTTCTTCCTCGGTGGAAATTACATC
GGCCCTGCTGTCGACCACTTTCAGGAGATAACGGCACGCTTCCCTCAGTT
TTGGGCGGTCACCTTGCTCGCCATCGCCTTCCTCGAGTACCGCCAGATCA
GCATCGGCTTCGCTGAGCCGGACCCTGTGACGGGCGAGGGCGGGCTGCGA
GTAGACTACGTGCCAGGGGACCTTGGCTTCGACCCGCTCGGGCTCGCGCC
GACAGACTCGGTGGAGCTCAAGGCCATGAAGACAAAGGAGCTCAACAACG
GCCGCCTCGCCTTTTGGGCGGTCACCTTGCTCGCCATCGCCTTCCTCGAG
TACCGCCAGATCAGCATCGGCTTCGCTGAGCCGGACCCTGTGACGGGCGA
GGGCGGGCTGCGAGTAGACTACGTGCCAGGGGACCTTGGCTTCGACCCGC
TCGGGCTCGCGCCGACAGACTCGGTGGAGCTCAAGGCCATGAAGACAAAG
GAGCTCAACAACGGCCGCCTCGCCATGATTGGTATCGCGGGCATGCTCGT
CCAAGAACTGGTCAATCCGGCGCCCATCCTAGGATGAATGATTGGTATCG
CGGGCATGCTCGTCCAAGAACTGGTCAATCCGGCGCCCATCCTAGGATGA
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