prot_P-fluviatile_contig76.14083.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig76.14083.1
Unique Name	prot_P-fluviatile_contig76.14083.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	225

Homology

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G5B4_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 1.180e-115
Identity = 171/224 (76.34%), Postives = 193/224 (86.16%), Query Frame = 0

Query:    1 MVGSTAGLAIVAAAFFGAASCRALMVHTPMTLSAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            MV ST  L  +A+  F  ASC A +V TP TLSA+P  TST+ RMSAG+DY+++LPGAPF DGK+WDP+GLSS+AD EDIKKWREAEIKHGRVAMLASVGVLVAENFHP FLG +YIGPA+ HF+EITARFPQFWA+TLLAIA+LEYRQI+IGFAE DPVTGEGG+R+DYVPGDLGFDPLGLAP D  EL  MKTKELN+GRLAMIGI GM+VQELV P PI G
Sbjct:   52 MVTSTGALVGMASWCF--ASCEAFIVPTPTTLSARP--TSTAARMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q6_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 5.750e-95
Identity = 136/192 (70.83%), Postives = 158/192 (82.29%), Query Frame = 0

Query:   33 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            SA P  +S++++MSAG+DY+A+LPGAPF DGKI+DPL LS  AD  DIKKWREAEIKHGRVAMLAS+GVLVAE +HP F+G +YIGPAVDHFQEI+A++P+FW  +LL +AF+EY  I   F  P  VTGEGGL+ DYVPGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGMLVQEL+NPA ILG
Sbjct:   29 SAAPASSSSALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S1_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 2.800e-93
Identity = 134/192 (69.79%), Postives = 162/192 (84.38%), Query Frame = 0

Query:   33 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            SA P  ++++++MSAG+DY+A+LPGAPF DGKI+DPL LS  A+  +IK WREAEIKHGRVAMLA+VGV+VAE +HP F+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I+  +AEP PVTGEGGLR +Y PGDLGFDPL L P D   L+ M+TKELNNGRLAMIGIAGMLVQELVNPA ILG
Sbjct:   30 SAAPASSASALKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 5.290e-87
Identity = 127/191 (66.49%), Postives = 151/191 (79.06%), Query Frame = 0

Query:   33 SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 223
            SA P   +++++MSAG+DY+A+LPGAPF DGKI+DPL LS  A   DIKKWREAEIKHGRVAMLAS+G+LVAE +HP F+G ++IGPA+ HFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P     L  MKTKELNNGRLAMIGIAGML QELVN   IL
Sbjct:   29 SAAPASAASALKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S0_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.010e-85
Identity = 131/198 (66.16%), Postives = 158/198 (79.80%), Query Frame = 0

Query:   28 TPMTL-SAQPIPTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            TPM + SA P  ++++++MSAGTDY+A+LPGA   +GKI+D L L+  AD  +IK WREAEIKHGRVAMLA+VGV+VAE +HPFF+G +YIGPAVDHFQEITA+FPQFWA +LL +AF+EY  I   +AEP PVTGEGGLR +Y PGDLGFDP  + P D   L+ M+ KELNNGRLAMIGI GMLVQELVN   ILG
Sbjct:   24 TPMAVRSAAPASSASALKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7S5_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 2.340e-79
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 0

Query:   64 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            +I+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE +HPFF+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196

[Close]

BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7G7Q7_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 7.370e-79
Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 0

Query:   64 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 223
            KI+DPLGL+  A+  DIK WREAEIKHGRVAMLAS+GVLVAE +HPFF+G +YIGPAVDHFQEI+ARFP+FWA +LLA+A +EY  I+  +AEP  VTGEGGLR +Y PGDLGFDPL L PTD   L+ M+TKELNNGRLAMIGIAG LVQELVNP  IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: A0A6H5JWB4_9PHAE (LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.520e-76
Identity = 117/161 (72.67%), Postives = 132/161 (81.99%), Query Frame = 0

Query:   64 KIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            +I+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE +HPFF+G +YIGPAVDHFQEI+A+FP+FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:  232 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392

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BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: A0A6H5K8D0_9PHAE (LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.070e-69
Identity = 115/187 (61.50%), Postives = 129/187 (68.98%), Query Frame = 0

Query:   38 PTSTSVRMSAGTDYIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPILG 224
            P+S  ++MSAG+DY+A+LPGAPF DGKI+DPLGLS  A   DIKKWREAEIKHGRVAMLAS+GV+VAE                            FWA +LL +AF+EY  I   F  P  VTGEGGL+ DY+PGDLGFDPL L P D   L  MKTKELNNGRLAMIGIAGML QELVNPA ILG
Sbjct:   34 PSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192

[Close]

BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Match: D7FQG7_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 7.110e-67
Identity = 103/187 (55.08%), Postives = 138/187 (73.80%), Query Frame = 0

Query:   40 STSVRMSAGTDYIASLPGAPF---PDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVGVLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQISIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNNGRLAMIGIAGMLVQELVNPAPIL 223
            S++ +M+AG+DY ASLPGAPF    +GK +DP GL++  D E IKKWREAE+KHGRV+MLA+VG+LV+E FHP F+G  YIGPAV+H Q+I   +P FW  +L  IAF+E + I   +    PVTG G L+ +Y PGDLGFDPLGLAP D  + + ++++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:   38 SSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig76.14083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G5B4_ECTSI	1.180e-115	76.34	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q6_ECTSI	5.750e-95	70.83	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S1_ECTSI	2.800e-93	69.79	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q9_ECTSI	5.290e-87	66.49	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]
D7G7S0_ECTSI	1.010e-85	66.16	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7S5_ECTSI	2.340e-79	72.67	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
D7G7Q7_ECTSI	7.370e-79	73.13	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A6H5JWB4_9PHAE	1.520e-76	72.67	LHCP protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
A0A6H5K8D0_9PHAE	1.070e-69	61.50	LHCP protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
D7FQG7_ECTSI	7.110e-67	55.08	Light harvesting complex protein n=2 Tax=Ectocarpu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 48..223 e-value: 9.0E-38 score: 131.9
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 54..215 e-value: 6.9E-40 score: 137.2
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 24..221
None	No IPR available	PANTHER	PTHR21649:SF63		coord: 24..221
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..224
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.652
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 52..223
None	No IPR available	TMHMM	TMhelix		coord: 7..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig76	contig	P-fluviatile_contig76:201201..203837 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig76.14083.1	mRNA_P-fluviatile_contig76.14083.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig76 200668..204626 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig76.14083.1 ID=prot_P-fluviatile_contig76.14083.1|Name=mRNA_P-fluviatile_contig76.14083.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=225bp
MVGSTAGLAIVAAAFFGAASCRALMVHTPMTLSAQPIPTSTSVRMSAGTD
YIASLPGAPFPDGKIWDPLGLSSKADTEDIKKWREAEIKHGRVAMLASVG
VLVAENFHPFFLGGNYIGPAVDHFQEITARFPQFWAVTLLAIAFLEYRQI
SIGFAEPDPVTGEGGLRVDYVPGDLGFDPLGLAPTDSVELKAMKTKELNN
GRLAMIGIAGMLVQELVNPAPILG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR022796	Chloroa_b-bind
IPR001344	Chloro_AB-bd_pln