prot_P-fluviatile_contig76.14076.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig76.14076.1
Unique Nameprot_P-fluviatile_contig76.14076.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length605
Homology
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BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Match: D7G5B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B7_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 3.840e-104
Identity = 185/333 (55.56%), Postives = 226/333 (67.87%), Query Frame = 0 
Query:  212 PSQRRAKIWAFKCTLA--LAPVTLFFLALGGMQAWPYVQLAANGAWGAVRGFAGKTPRPEMCFLNQGEEATQEICK-GAETADCPVGATCGRGTILQCDLPFEKKGDGTACVLNAEAEEEAKAVVEALRTLTIQELCKGNGLIFRNPEACWKRS-MTLSAAATAQNRTSLSLLAAFPAGNVGGLLELEGEPSLEFGGAEDDVGDKAGSGADRKVSLSKSMHDELLLMPSLRCRARLAAGSWLLAYWPYCLGLYALLLIIGCLDIRRLKSYKQRVQVCTMRDECYQTLLDHAAGDSSPMQVSHIQISVGDKRRARREGSQANVQQKVSELWHLV 540
            P + ++  W FKC +   LAPV +  L  G + AWP+VQ+AA GAWGA RG   KTP  E CFL  GE+    +CK G E  DCP  ATCG G IL C+LP+  + D  ACVL AEAE+EAKAVVEALRTLT +ELCKG GLI   P A  + S +TL+ AATAQ+R  LSLLA  P GNV GL+ELEGEP+  FGG +D     AGSG +R   LS+S HD ++     RC+ARLAAGSW + YW YCL +Y L++   CLD+RR  SY + VQVCT+RD CYQTLLDHA+ DSSPMQVSHIQ SV D  R R   ++A +Q+ ++ LW LV
Sbjct:  291 PRRGKSLEWTFKCAVVVVLAPVVVLLLVSGLLVAWPHVQVAAGGAWGAFRGLTAKTPSVEKCFLQPGEQE-DIVCKSGTEAMDCPDHATCGAGRILHCNLPYTLRKDRAACVLVAEAEKEAKAVVEALRTLTAEELCKGKGLIM--PRASARGSFITLTDAATAQSRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEGCAGSGMERVARLSESAHDAVMRTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDLCYQTLLDHASKDSSPMQVSHIQSSVTDWTRQRVAKNRATIQRHIAGLWPLV 620
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BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Match: A0A6H5L750_9PHAE (MSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L750_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 1.110e-102
Identity = 184/323 (56.97%), Postives = 220/323 (68.11%), Query Frame = 0 
Query:  220 WAFKCTLALAPVTLFFLALGGMQAWPYVQLAANGAWGAVRGFAGKTPRPEMCFLNQGEEATQEICK-GAETADCPVGATCGRGTILQCDLPFEKKGDGTACVLNAEAEEEAKAVVEALRTLTIQELCKGNGLIFRNPEACWKRS-MTLSAAATAQNRTSLSLLAAFPAGNVGGLLELEGEPSLEFGGAEDDVGDKAGSGADRKVSLSKSMHDELLLMPSLRCRARLAAGSWLLAYWPYCLGLYALLLIIGCLDIRRLKSYKQRVQVCTMRDECYQTLLDHAAGDSSPMQVSHIQISVGDKRRARREGSQANVQQKVSELWHLV 540
            WAFKC + +  V L  L  G + AWP VQ+AA GAWGA RG   KTP  E CFL  GE+    +CK G E  DCP  ATCG G IL C+LP+  K D  ACVL AEAEEEAKAVVEALRTLT +ELCKG GLI   P A  + S +TL+ AATAQNR  LSLLA  P GNV GL+ELEGEP+  FGG +D   D AGSG +R   LS+S HD ++     RC+ARLAAGSW + YW YCL +Y L++   CLD+RR  SY + VQVCT+RD CYQTLLD+A+ DSS MQVSHIQ SV D  R R   ++A + + +++LW LV
Sbjct:  339 WAFKCAVVMVMVLL--LVSGLLVAWPQVQVAAGGAWGAFRGLTAKTPPVEKCFLQLGEQG-DVVCKSGTEATDCPAHATCGAGRILHCNLPYTLKKDRAACVLVAEAEEEAKAVVEALRTLTAEELCKGKGLIM--PRASSRGSFITLTDAATAQNRGPLSLLAGMPPGNVVGLIELEGEPAQVFGGGQDGAEDCAGSGMERVARLSESAHDAVMDTLGWRCKARLAAGSWFMTYWQYCLAMYCLVVGAVCLDLRRRNSYYRHVQVCTIRDVCYQTLLDNASKDSSAMQVSHIQSSVTDWTRQRVAKNRATIHRHIADLWPLV 656
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5B7_ECTSI3.840e-10455.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L750_9PHAE1.110e-10256.97MSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 322..342
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..451
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 472..604
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 452..471
NoneNo IPR availableTMHMMTMhelixcoord: 447..469

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:139781..145703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14076.1mRNA_P-fluviatile_contig76.14076.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig76 138857..148232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig76.14076.1 ID=prot_P-fluviatile_contig76.14076.1|Name=mRNA_P-fluviatile_contig76.14076.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=605bp
MDLDTSDADMPAPAESKSPSSQAAPRPARSGAAQPPRLQNGKPPPLELDA
YPPMPETSTSAAGRRMYQPSTQSLQNGDGRPSAPSRGGQRTGVRPTSFLR
HATNHAPNSQSKDVVHMAAASRLSYPLRDSPDDPSVPTAGSGPLSGRPSF
LSQAGGVGNRPHASDANANGGTSTVTNSGGETAGLAGQRGDHAASAAAAD
RNRSGRASGGGPSQRRAKIWAFKCTLALAPVTLFFLALGGMQAWPYVQLA
ANGAWGAVRGFAGKTPRPEMCFLNQGEEATQEICKGAETADCPVGATCGR
GTILQCDLPFEKKGDGTACVLNAEAEEEAKAVVEALRTLTIQELCKGNGL
IFRNPEACWKRSMTLSAAATAQNRTSLSLLAAFPAGNVGGLLELEGEPSL
EFGGAEDDVGDKAGSGADRKVSLSKSMHDELLLMPSLRCRARLAAGSWLL
AYWPYCLGLYALLLIIGCLDIRRLKSYKQRVQVCTMRDECYQTLLDHAAG
DSSPMQVSHIQISVGDKRRARREGSQANVQQKVSELWHLVSALPAREQPR
PHDDPLSEFQMVASPLVRPTPQQDAVRLPYRDASVYLIQPVLAHAVGEKV
RSLT*
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