mRNA_P-fluviatile_contig76.14067.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig76.14067.1 vs. uniprot
Match: D7G5C7_ECTSI (Chorein N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C7_ECTSI) HSP 1 Score: 1358 bits (3515), Expect = 0.000e+0 Identity = 855/1607 (53.20%), Postives = 1006/1607 (62.60%), Query Frame = 1
Query: 199 MSSYIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPSLFYVGKLSIDIPLAWQFSRPVKIVVSDLLGVVRVCDHETLTAEDARKCISANVHVKAILSKLAAELGGELGGGKAQEGRPAERIYMQTVHNIHKIMRKLEVTMTNAHVRVEEPVRKALSDEPKIEASTEAGVAAPAIAFGVCLRSVSLGLDERADAEAGGGSGGERWFGKKFGEMDAALLENFSRYDAGDIALEGFRAEPESGDPSVIEIDGDQRHAASMDTSEEQATSNESGSSSTLMITKFGGVRSASVYFCRDEECYRYACRQQVPTAQHCTGKNIR*ATW*LLCAVVEFVE*SQLQCRSPRPDEGLLCPQPAYENKSELCPVCNTPSLFRRSFLSHVLLFFFTVLCYMGIIRHGSANDREETLRRLREGLKNPPTTLPPVLRRCRAGIGLKVVLSAREWGKIESVDVRLLAGDINVQIGDDHVGYLLRWSSLLIGHKRTLALVALRPRRDAVP---PSRNSGRGACSDSSRFYRALWQHAVEAVLRDLRSSIRQRGEKAREELRSTHAARDERIDRPWTSEESEYRATRGLLWRTWFAEWVGAARYLSLRQMIQSRLVVESFADKSGGTHRRLCEDLEVQRKLPARQVAGKGRRATSGTITGESGGS-PRTGARELAKYLMPWQLPQEDVEKAWTLITRKTLRWELRATRDIKLAIDEERKDQSGLDADPAVLQALWSIQLQLDAQLPNRICAFARRMAFVWIGWRTRIDRLWQARAEKQRRLGLGLGEPPTPPRLAPHGSTSCTESEAGFFTNSSDSAPPRGSAMEAVAGGAEDGGDGADHVGTLLVRMGQLDGVESVGLLSLAPKAVATLMLEESSATLEEMNLETVSTEVAKYDHKNERCFWNQSFRLQVELNEDYVHDLRRERMKKHRSRRVSAGSSSGDVPFLDSDGRMKDAGSTSVSVHRLSPIKSPAVRRRFDSTDSSRSPMVDAVPLSSFLLAVSIVDKSVFGVTQLGNMTLPGKQLTSSPLKVLEHRCALFSPAAAGRHPRELTLETIFVPPGEDAAHAEEKLSAIGKRRLLERELD--TSKTSS--------RTSSAALDASPVLNPQRSSLDHVGERDVKILSAGLTDMSDAGTARGDVGETDEELRGSGDEGKAPSPLRSIPRVGVQIPEKVAISMRAAGVSVVIYLGREAGLSQHDVAS-------VVTLMESSAREIEVF--VDIDTDKVALTLEASTLRVLDKSLLQAAAALRPTTIASPARGQSGQDDTRT---QLFMVGPISIEASSTRQVCLPEYADSSLSGDDSESGAARQAPAIPXXXXXXXXXXPSTQGTEYPGFRRGRAAAAERIR-RDRRFLDMFGSWRMRDWRVRLNIGAYTVELGTRDDSSCLDEVWRDFRFSMPKLPLRDTQVLRGITADSSGTAKRSTWVVKTGARDLTVGVKMPVHEHGEVSLASPPISYVYVSSSESETYTPPSTPSASSSPALSMRG----NASLRTSSRLSEEAKVCFPS--EDKSTE--SGSSRRQQRSP--TSRAAREAV----GIGNAPGAGTAENSDFEGTPNNEELLRRINELEGELEALK 4896
M+S+IERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPS FYVGKLSIDIPLAW FSRPVK+ VSD+LGV+RVCDH ++ AEDAR+ ISANVHVKAILSKLA ELGGG A EG+ R+ +QT +N+HK+MRKLEVT+ NAHVRVEEP R+ ++DE +S+ G ++PA+AFGVCLR +SLG+DE AD EA GG G RW GKKF M+ ALL N SRYDA D AL+ E G DTS E+A S+ES +SSTL +TKF VR ASVYFCRDEECY SA DREETLRRLRE L++PP LPP+LRRCR G+GL+VVLSA+EWGKIES+D+RLL GDIN+Q+GDD +GYLLRW+SLL GH RTLAL ALRP RD VP PS +SGR S SR+YRALW+ AV VLRDLRSS QR E AR L+S AAR E DRPW++EE EYRA RGLLWRTWFAEWVGAARYLSLRQ++Q+RLVVE+F+DKSGG H RL EDLEVQ +++ +T SG + RTG R+LA+YLMPW+LPQEDV+KAW LI RKT RWELR KLAIDEER +Q LD PAVLQALWSIQLQLDAQLP+RICAFARRMAF+ GWR+RID+LWQARAEKQRRLGLG+G+PP PPRL P+ S S T SEAGF S A +A V E+ GDGAD VGTLLVRMGQLDGV VGLLS+APKA+ATLMLEESSATLEEMNLET STEVAKYDHKNERC W+++FRLQ V+AVP SSFLL+V+ +DKSVFGVTQLG MTLPGKQLTS PLKVLEHRCALFSPAA R PRELT+ETIFVPPGED A AE++LSAIGKRR L+ +LD TSK S R S AALDAS PQR+SLD+VGER+VK+LS AG+A G+ +EE G E KA S RSIP V P V +SMRAAGV++V YL A L++ + VVTL E+SAR+IE +DI A+ LEA+T+++LDKSLL+AA PT SP + ++ QL MVGP+ + +STR V + E+A +GDD GA +A P P G++ ++RGR + RD +F D+ G+W M DWR R IGAYTVELG D S ++EVWR RFSMPK L DTQVL G T D G A+ STW+++ GAR L V V+MP HE +V + P YVYVSSSESET +PP +PS+ S P+ + G AS LS EA V FPS E S E G P TS + E+ GI A A D + TP+NEEL+RR++ELE EL++L+
Sbjct: 1 MTSFIERKVNEICGRWLDGFTKDNVDVSLLQAKITLSDLHFKTDELCLLSPTFAPSFFYVGKLSIDIPLAWNFSRPVKMAVSDVLGVIRVCDHGSMQAEDARRSISANVHVKAILSKLA----DELGGGGADEGKRPARMNLQTAYNLHKVMRKLEVTVKNAHVRVEEP-RREVNDE----SSSHQGSSSPAVAFGVCLRGISLGMDEAADVEADGGLAGARWLGKKFRAMETALLGNISRYDAVDGALDAHSNEQRDAQAHGRSDTGSD---GVDDTSGEKAASDESTTSSTLAVTKFASVRGASVYFCRDEECY--------------------------------------------------------------------------------------------------SATDREETLRRLREDLRSPPAALPPLLRRCRGGVGLRVVLSAKEWGKIESMDIRLLGGDINLQVGDDQLGYLLRWASLLNGHMRTLALSALRPARDLVPATLPSDSSGR---SGKSRYYRALWRLAVGVVLRDLRSSAWQRSENARNNLQSAQAARSEIFDRPWSNEEREYRAARGLLWRTWFAEWVGAARYLSLRQLLQTRLVVENFSDKSGGIHNRLYEDLEVQ--------------SSTQKVTKSSGATGKRTGERKLARYLMPWELPQEDVDKAWGLINRKTWRWELRGAGGFKLAIDEERAEQGQLD--PAVLQALWSIQLQLDAQLPHRICAFARRMAFLRFGWRSRIDKLWQARAEKQRRLGLGVGDPPAPPRLTPNDSISFTASEAGFMGLSE--ADTNEAAETTVV---EEAGDGADRVGTLLVRMGQLDGVGGVGLLSVAPKAIATLMLEESSATLEEMNLETNSTEVAKYDHKNERCCWHETFRLQT----------------------------------------------------------------------------VEAVPRSSFLLSVTCLDKSVFGVTQLGTMTLPGKQLTSVPLKVLEHRCALFSPAAVSRQPRELTIETIFVPPGEDVALAEQELSAIGKRRRLQEKLDMATSKPKSSFRRNKPARGSPAALDASA--KPQRTSLDNVGEREVKVLSLV------AGSADNRSGQANEEPAAPGTEDKARSVQRSIPVVDTHTPGTVEMSMRAAGVTMVTYLVSSASLAREEGGRGSSQQGVVVTLTEASARQIEACAKMDIVRGTFAVALEAATIQLLDKSLLRAA----PTKTGSPLPAEPEDEEANAPHPQLMMVGPVGVAIASTRYVRVYEHAPPWSNGDDPGMGAPPEAHTAPK---------PPAPGSQLSSYQRGRMDNNASVDGRDPQFRDVLGTWPMWDWRGRFTIGAYTVELGKHRDPSGMEEVWRHLRFSMPKSALEDTQVLHGGTIDPFGGAQSSTWLLRAGARGLGVEVQMPKHERSDVPHDASPKQYVYVSSSESETCSPPLSPSSLSPPSPAANGVGEGGASSNAPPHLSREASVYFPSAQEHNSAECVGGGVEEADNPPIVTSPSVGESTVRNEGI-EGDSAALAGEPDPQTTPSNEELVRRVHELEAELKSLR 1375 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig76.14067.1 >prot_P-fluviatile_contig76.14067.1 ID=prot_P-fluviatile_contig76.14067.1|Name=mRNA_P-fluviatile_contig76.14067.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1196bp MGIIRHGSANDREETLRRLREGLKNPPTTLPPVLRRCRAGIGLKVVLSARback to top mRNA from alignment at P-fluviatile_contig76:70429..85768- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig76.14067.1 ID=mRNA_P-fluviatile_contig76.14067.1|Name=mRNA_P-fluviatile_contig76.14067.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=15340bp|location=Sequence derived from alignment at P-fluviatile_contig76:70429..85768- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig76:70429..85768- >mRNA_P-fluviatile_contig76.14067.1 ID=mRNA_P-fluviatile_contig76.14067.1|Name=mRNA_P-fluviatile_contig76.14067.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7176bp|location=Sequence derived from alignment at P-fluviatile_contig76:70429..85768- (Porterinema fluviatile SAG_2381)back to top |