prot_P-fluviatile_contig76.14066.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig76.14066.1
Unique Nameprot_P-fluviatile_contig76.14066.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length221
Homology
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BLAST of mRNA_P-fluviatile_contig76.14066.1 vs. uniprot
Match: D7G5C9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C9_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 4.320e-29
Identity = 63/95 (66.32%), Postives = 78/95 (82.11%), Query Frame = 0 
Query:    3 QVAFDRVADALAAERPALCLAWLGIDMLPMALQSASHQVPHITILNMKHNMLQLLPSELFLCLNQLKEIDVSENHICYLPEAIGLATGLRKLSLQ 97
            +VA +RVADALAAE   L LA +GID LP  L +AS++V HIT+L++KHN LQ+LPSELFLC+ QL+E+D S+N I YLPE IGLATGLRKL+LQ
Sbjct:   10 KVASNRVADALAAESSRLSLARIGIDALPGDL-TASNRVTHITVLDLKHNALQMLPSELFLCVTQLEEVDASKNRISYLPETIGLATGLRKLNLQ 103
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5C9_ECTSI4.320e-2966.32Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 65..88
e-value: 39.0
score: 8.4
coord: 89..110
e-value: 56.0
score: 7.2
coord: 111..134
e-value: 4.7
score: 16.0
coord: 41..64
e-value: 11.0
score: 12.8
coord: 135..156
e-value: 140.0
score: 4.0
coord: 157..180
e-value: 23.0
score: 10.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 19..199
e-value: 6.2E-33
score: 115.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 114..170
e-value: 1.2E-7
score: 31.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 136..157
score: 7.835
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 90..111
score: 7.104
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 43..64
score: 5.81
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 67..88
score: 6.318
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 113..134
score: 5.71
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 159..181
score: 5.764
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 35..181
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 35..181
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 39..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:67404..69398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14066.1mRNA_P-fluviatile_contig76.14066.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig76 67404..69398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig76.14066.1 ID=prot_P-fluviatile_contig76.14066.1|Name=mRNA_P-fluviatile_contig76.14066.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp
LGQVAFDRVADALAAERPALCLAWLGIDMLPMALQSASHQVPHITILNMK
HNMLQLLPSELFLCLNQLKEIDVSENHICYLPEAIGLATGLRKLSLQKNC
LRNLPDGFGLLHALEALNVAHNSLEKLPKAIGEWKELRRLDLAYNFLQEI
PHEAGLLAKLEHVDISGNPIQRMPLAIERLQTKGELLRSKARRQNLLRRA
LHVRDSVRSAFVGECCNESS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt