prot_P-fluviatile_contig12.1325.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig12.1325.1
Unique Name	prot_P-fluviatile_contig12.1325.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	121

Homology

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BLAST of mRNA_P-fluviatile_contig12.1325.1 vs. uniprot
Match: D8LP64_ECTSI (EsV-1-27 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP64_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 9.700e-22
Identity = 78/121 (64.46%), Postives = 93/121 (76.86%), Query Frame = 0

Query:    1 MTVLRTLSTVVEFVGETTINFISXXXXXXXXXXXXXXXXXXXXXXXXLNQFVSVWRLVVTLVTISLGETCFLAKTTMKRIADALKDVMLSLKAFSKGVPGMVTVLKAQSVDVKKNVDVKTI 121
            MT+LR+L++ V FVGETTIN   XXXXXXXXXXXXXXXXXXXXXXXX +Q VSVWRLVV ++T +LGETC+LA   + R+ D   D MLSL+AF  G+PG+  VLKAQ  DVK  V+V  I
Sbjct:    1 MTLLRSLASTVSFVGETTINXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQLVSVWRLVVVIITATLGETCYLATNGIDRVFDFFSDYMLSLQAFRSGLPGLAKVLKAQVDDVKTGVNVTNI 121

[Close]

BLAST of mRNA_P-fluviatile_contig12.1325.1 vs. uniprot
Match: Q8QNN4_ESV1K (EsV-1-27 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN4_ESV1K)

HSP 1 Score: 92.8 bits (229), Expect = 1.610e-20
Identity = 77/121 (63.64%), Postives = 96/121 (79.34%), Query Frame = 0

Query:    1 MTVLRTLSTVVEFVGETTINFISXXXXXXXXXXXXXXXXXXXXXXXXLNQFVSVWRLVVTLVTISLGETCFLAKTTMKRIADALKDVMLSLKAFSKGVPGMVTVLKAQSVDVKKNVDVKTI 121
            MT+LR+L++ V F+GETTIN   XXXXXXXXXXXXXXXXXXXXXXXX  Q VSVWRLVVT++T +LGETC+LA   + R+ D   D +LSL+AFS G+PG+  VLKAQ+ DVK  V++ +I
Sbjct:   59 MTLLRSLASTVSFIGETTINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVSVWRLVVTILTATLGETCYLATNGIGRVFDFFSDYLLSLQAFSSGLPGLAKVLKAQADDVKTGVNLGSI 179

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig12.1325.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig12.1325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LP64_ECTSI	9.700e-22	64.46	EsV-1-27 n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
Q8QNN4_ESV1K	1.610e-20	63.64	EsV-1-27 n=1 Tax=Ectocarpus siliculosus virus 1 (i...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 49..53
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..121
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 54..73
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 29..48
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..28
None	No IPR available	TMHMM	TMhelix		coord: 29..48
None	No IPR available	TMHMM	TMhelix		coord: 53..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig12	contig	P-fluviatile_contig12:74421..74783 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig12.1325.1	mRNA_P-fluviatile_contig12.1325.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig12 74421..74783 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig12.1325.1 ID=prot_P-fluviatile_contig12.1325.1|Name=mRNA_P-fluviatile_contig12.1325.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=121bp
MTVLRTLSTVVEFVGETTINFISFVRDTVFSVLTFVVQTITTTILFVLNQ
FVSVWRLVVTLVTISLGETCFLAKTTMKRIADALKDVMLSLKAFSKGVPG
MVTVLKAQSVDVKKNVDVKTI