prot_P-fluviatile_contig74.13971.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig74.13971.1
Unique Name	prot_P-fluviatile_contig74.13971.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	187

Homology

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: D7FWB9_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB9_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 2.680e-74
Identity = 122/169 (72.19%), Postives = 136/169 (80.47%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPGMEKKKVMTD-------RLPVVTGSGRAVQAVL 162
            MSMQA KSK+LPFMP PA LDG+MAGD GFDP+GF++  P+DF+REAELKHGRICQLAVVGFAATDLG  LPGAEHAV+S+AAHDAAVATGAMPQILLWVSAFEAIS+VAVIQMLEGSGR PG FG DP  LYS+P + KKK   +       RL +    G   QAVL
Sbjct:   34 MSMQATKSKSLPFMPQPAKLDGTMAGDAGFDPLGFSNFIPLDFLREAELKHGRICQLAVVGFAATDLGFRLPGAEHAVASIAAHDAAVATGAMPQILLWVSAFEAISTVAVIQMLEGSGRIPGDFGFDPSNLYSRPELAKKKADMELKEITHCRLAMCAFGGMVTQAVL 202

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A836CK85_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK85_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.380e-53
Identity = 94/166 (56.63%), Postives = 116/166 (69.88%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDP----QGLYSKPGMEKKKVMTDRLPVVTGSGRAVQAVL 162
            ++M A KS ++PFMP P  LDG++ GDVGFDP+GF++   +DF+REAE+KHGRIC LAV G+ A DLGLHLPG  H V S+ AHD AV  GAM QILLW S FEAIS+V V+QML GSGR PGYFG DP    +   SK  +E  ++   RL ++  SG   QA L
Sbjct:   40 VTMMAGKSASIPFMPKPEKLDGTVPGDVGFDPLGFSNWVNLDFLREAEIKHGRICMLAVAGWVAVDLGLHLPGDVHNVGSLEAHDTAVKFGAMSQILLWTSIFEAISTVGVVQMLNGSGRQPGYFGFDPLNFSKDAASKAKLELNEIKNGRLAMLAFSGIVTQAAL 205

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A7R9YG40_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG40_9STRA)

HSP 1 Score: 165 bits (417), Expect = 5.970e-48
Identity = 94/163 (57.67%), Postives = 113/163 (69.33%), Query Frame = 0

Query:    7 KSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEG-SGRAPGYFGLDPQGLYSKPGMEKKK------VMTDRLPVVTGSGRAVQAVL 162
            KS +LPFMP PAALDG++ GDVGFDP+G ++   V +MREAELKHGRIC LAVVGF ATDLG+HLPGA H V SVAAHDAAV  G M QILLWVS  E  S++AV +M+ G + R PG F LD  G Y+K   ++KK      +   RL ++   G   QAVL
Sbjct:   63 KSASLPFMPRPAALDGTLVGDVGFDPLGLSNAVDVRWMREAELKHGRICMLAVVGFIATDLGIHLPGAVHNVGSVAAHDAAVKFGGMSQILLWVSVAEVWSAIAVKEMMLGETDRQPGDFKLDLLGNYAKANDQQKKDLQLKELKNGRLAMIAFGGMVTQAVL 225

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A4D9CSZ5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSZ5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.590e-45
Identity = 89/167 (53.29%), Postives = 115/167 (68.86%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPGMEKKKVMTD-----RLPVVTGSGRAVQAVL 162
            +SM A KSK++PF+P P ALDG+ AGDVGFDP+GFTS  P+ +++EAE+KH RI  LA +G+   D  +HLPG  HAVSS+AAHD AV +GA+ QIL+W S  EAIS +A+ QMLEGSGR PG F  DP G ++K     KK+  +     RL ++  SG   QA L
Sbjct:   30 VSMMAEKSKSIPFLPRPPALDGTAAGDVGFDPVGFTSWLPLAYLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHAVSSLAAHDVAVKSGALAQILIWTSIAEAISVIAISQMLEGSGRQPGDFKFDPLG-FAKDEQTLKKLQLNELKNGRLAMLAFSGIVTQAAL 194

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A7S2S869_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S869_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.040e-44
Identity = 87/166 (52.41%), Postives = 111/166 (66.87%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPG----MEKKKVMTDRLPVVTGSGRAVQAVL 162
            M M AAKS A+PF+P PA LDGS+ GDVGFDP+G +   P+D++RE+ELKHGRIC LAV GFAATDLG  LPG +  V+S  AH+ AV+ G M  +   + A E IS +A+ + L GSGRA G +GLDP  L  KP     M+ K++   RL ++  SG   QAVL
Sbjct:   41 MKMMAAKSAAIPFLPKPAELDGSLIGDVGFDPLGVSDWMPLDYLRESELKHGRICMLAVTGFAATDLGFKLPGEQFNVASADAHNMAVSAGYMTVMGCAIFALECISGLAIQESLAGSGRAAGDYGLDPLKLSDKPDKMADMQMKEITHARLAMLAFSGMVTQAVL 206

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: F0Y5A3_AURAN (Putative plastid light harvesting protein isoform 33 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5A3_AURAN)

HSP 1 Score: 154 bits (388), Expect = 5.910e-44
Identity = 91/167 (54.49%), Postives = 107/167 (64.07%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQML-EGSGRAPGYFGLDPQGLYSKP----GMEKKKVMTDRLPVVTGSGRAVQAVL 162
            ++M    S+ALPFM  P ALDG+ AGDVGFDP GFTS+F V ++REAE+KHGRIC LA  GF ATDLG  LPG  H VSSV AHD A   GAM Q+ LW+S  E I S  V QM+  GS R PG +GLDP    S P     M+ K++   RL +   SG   QAVL
Sbjct:   28 VAMNYQASEALPFMEKPEALDGTYAGDVGFDPFGFTSIFDVKWLREAEIKHGRICMLAWTGFVATDLGFTLPGDMHQVSSVLAHDVACKYGAMQQLFLWLSFTEVILSAGVAQMMWMGSPREPGDYGLDPLDFCSTPEKKADMKLKEITHCRLAMFAFSGVVTQAVL 194

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: W7T6P5_9STRA (Light-harvesting protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6P5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.280e-44
Identity = 89/167 (53.29%), Postives = 114/167 (68.26%), Query Frame = 0

Query:    1 MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPGMEKKKVMTD-----RLPVVTGSGRAVQAVL 162
            +SM A KSK++PF+P P ALDG+  GDVGFDP+GFTS  P+ +++EAE+KH RI  LA +G+   D  +HLPG  HAVSS+AAHD AV +GA+ QIL+W S  EAIS VA+ QMLEGSGR PG F  DP G ++K     KK+  +     RL ++  SG   QA L
Sbjct:   99 VSMMAEKSKSIPFLPRPPALDGTAPGDVGFDPVGFTSWLPLAYLQEAEIKHCRIAMLATLGWIVADF-VHLPGDVHAVSSLAAHDVAVKSGALAQILIWTSIAEAISVVAISQMLEGSGRQPGDFKFDPLG-FAKDEQTLKKLQLNELKNGRLAMLAFSGIVTQAAL 263

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A7S3ZSN9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSN9_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.750e-43
Identity = 82/158 (51.90%), Postives = 108/158 (68.35%), Query Frame = 0

Query:    7 KSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQ--GLYSKPGMEKKKVMTDRLPVVTGSGRAVQAVL 162
            +S A+PF+P P  L G M GD GFDP+G +   PV+++RE+ELKHGR+C LAVVGF ATDLG  LPG  H V+S+ AHD AV  GAM QI +W++  E I  +A+++ML+GSGR PG FG DP   G  + P M+ K++   RL ++  SG   QAVL
Sbjct:   43 RSPAMPFLPRPQKLKG-MVGDKGFDPLGLSDWVPVEWLRESELKHGRVCMLAVVGFVATDLGFRLPGEMHNVASINAHDMAVDMGAMTQIGIWIAVAECIGYLAILEMLDGSGRQPGDFGFDPLQIGGANDPEMQLKELENGRLAMLAFSGIVTQAVL 199

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A8J2SH85_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH85_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.830e-42
Identity = 90/161 (55.90%), Postives = 104/161 (64.60%), Query Frame = 0

Query:    8 SKALPFMPAPAALDG-SMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQML-EGSGRAPGYFGLDPQGLYSKP----GMEKKKVMTDRLPVVTGSGRAVQAVL 162
            S+ALPFM  PA+LD   MAGDVGFDP GF+S+F V ++REAE+KHGRIC LA  GF ATDLG  LPG  H VSSV AHD A   GAM QI LW+S  E + S  V QM+  GS R PG FGLDP    S P     M+ K++   RL +   SG   QAVL
Sbjct:   34 SEALPFMERPASLDELEMAGDVGFDPFGFSSIFNVKWLREAEIKHGRICMLAWTGFVATDLGFTLPGDMHQVSSVEAHDVACKYGAMQQIFLWLSFIEVVHSFGVAQMMWMGSDRQPGDFGLDPLDFCSTPEKAADMKLKEITHCRLAMFAFSGVVTQAVL 194

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BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Match: A0A6V1QB66_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB66_HETAK)

HSP 1 Score: 149 bits (376), Expect = 4.060e-42
Identity = 81/165 (49.09%), Postives = 105/165 (63.64%), Query Frame = 0

Query:    2 SMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELKHGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWVSAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPGMEK----KKVMTDRLPVVTGSGRAVQAVL 162
            +M A KS ALPFMP PA LD S+ G  GFDP+GF+    VD++REAE+KHGRIC LAVVG+ ATD+GLHLPG  H   S+ AHD A+  GAM Q+L+ +   E    +A+ + + GSGRAPG FG DP G    P   +    K++   RL ++  SG   Q+ L
Sbjct:   31 TMMAEKSAALPFMPKPANLDESLPGYAGFDPVGFSDWLSVDWLREAEIKHGRICMLAVVGYIATDMGLHLPGDMHNYDSLLAHDQAIKNGAMQQLLMGIGWAETFGFLAIGETMRGSGRAPGDFGFDPLGFSKTPEKAQEYATKEINNGRLAMLAFSGIVTQSAL 195

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig74.13971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWB9_ECTSI	2.680e-74	72.19	Light harvesting complex protein n=1 Tax=Ectocarpu...	[more]
A0A836CK85_9STRA	2.380e-53	56.63	Light harvesting complex protein n=1 Tax=Tribonema...	[more]
A0A7R9YG40_9STRA	5.970e-48	57.67	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A4D9CSZ5_9STRA	2.590e-45	53.29	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S2S869_9STRA	1.040e-44	52.41	Hypothetical protein n=2 Tax=Rhizochromulina marin...	[more]
F0Y5A3_AURAN	5.910e-44	54.49	Putative plastid light harvesting protein isoform ...	[more]
W7T6P5_9STRA	7.280e-44	53.29	Light-harvesting protein n=2 Tax=Nannochloropsis g...	[more]
A0A7S3ZSN9_9STRA	2.750e-43	51.90	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A8J2SH85_9STRA	3.830e-42	55.90	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A6V1QB66_HETAK	4.060e-42	49.09	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 16..141 e-value: 2.0E-22 score: 80.4
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10		coord: 11..147 e-value: 8.3E-20 score: 73.4
None	No IPR available	PANTHER	PTHR21649:SF7	CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC	coord: 5..134
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..186
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 10..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..9
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 6..137
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 5..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig74	contig	P-fluviatile_contig74:321700..323471 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig74.13971.1	mRNA_P-fluviatile_contig74.13971.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig74 319930..323471 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig74.13971.1 ID=prot_P-fluviatile_contig74.13971.1|Name=mRNA_P-fluviatile_contig74.13971.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=187bp
MSMQAAKSKALPFMPAPAALDGSMAGDVGFDPIGFTSVFPVDFMREAELK
HGRICQLAVVGFAATDLGLHLPGAEHAVSSVAAHDAAVATGAMPQILLWV
SAFEAISSVAVIQMLEGSGRAPGYFGLDPQGLYSKPGMEKKKVMTDRLPV
VTGSGRAVQAVLLLPWRERRLKLSDPPEPQRPWARA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf
IPR001344	Chloro_AB-bd_pln