mRNA_P-fluviatile_contig73.13931.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig73.13931.1
Unique NamemRNA_P-fluviatile_contig73.13931.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 1.960e-148
Identity = 238/371 (64.15%), Postives = 279/371 (75.20%), Query Frame = 3
Query: 1020 VKEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGE-SGSAWTSADDEVLRAGADDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAGRLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETRRDANVILTMYPLRDTTPALRSELQRPADGAAFSNSVAQVQPVPVGL 2129
            + E+N + FL+  RRLVP    LL RFD+VIEEFG C+DN S EVLLRPK+ KAVR LRKHIE  CLSDPDG+AMY+ IGK K GL +YRCVRGTNDVEGYHRYLRTLLASYCASP+LAQSVLLEFN+RWNL+MM+KNRGLP++LG HYNQYLVE IQR TADWD S PVFP+WPAAIDS DTGER GL +S+W GE  G  W  AD++       D+ D+NGRTP+S+LT S+K+YAKMMGE+MPETRVHT                      GR+Q + R NFD WA KWNA CD++QQG  P+  +YRKTAKQLEEY    +R AN  LT+ P R+T  ALR++LQ+P DGAAF NSV Q+QPVPV L
Sbjct:  562 LTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSLWGGERDGEVWGIADNDAFCTDDGDS-DVNGRTPMSDLTLSAKMYAKMMGESMPETRVHT---------------------WGRMQLYQRVNFDAWAGKWNADCDQVQQGLAPFAKIYRKTAKQLEEYYGVLQRQANDTLTLLPRRNTANALRADLQQPVDGAAFENSVGQIQPVPVAL 910          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 9.050e-106
Identity = 193/411 (46.96%), Postives = 257/411 (62.53%), Query Frame = 3
Query:  924 FLAPLSDRCLAL----VPLVPGRDRAASPRFHHRELV---KEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKD-GLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAGRLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETRRDANVILTMYPLRDTTPALRSELQRPADGAAFSNSVAQVQPVPVGLS 2132
            F+A L D C  +    +      ++A + +    E V   K+KN   F++ CRRLVP  + LL RF+ VI +F + +D  S E LLRP +R+AV LLRKHIE+GCLSDP+ V +YY    TK  G+   RCVRGTN  EGYHRYLR LL++YCASP+LA SVLLEFN+RWN++M VKNRGLP  +GE ++Q+ +E+IQR TA W P  P+FP+W +A+D+ADTGE+SGL++S+W   SG    S   +++    D+ G      P+  LT S+K YA+MM   MP T VHT  EKR F +EL    + PG+  GR +++   NFD WA  WN  C KI+ G V +  VYRKT+ QL+ Y  +    AN   TM PLR+   ALR  LQ   +GAAF + V    P+ V  S
Sbjct:  203 FMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYY----TKSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLV----DEQGLAQNAVPMPKLTHSAKKYAQMMHAGMPVTPVHTGAEKRNFASELNSQLYLPGQPEGRNEKYQNINFDAWAGAWNQHCAKIESGLVEFEAVYRKTSGQLQSYHQKFLERANAQFTMLPLRNQHSALRVHLQEGEEGAAFGDLVGVSVPLAVPRS 605          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 2.610e-97
Identity = 175/256 (68.36%), Postives = 192/256 (75.00%), Query Frame = 3
Query: 1014 ELVKEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREE 1781
            E VK+ N + FLKRCRRLVPPP ELL  FDKV+EEFGNC+DN S+E LLRPKS KAVRLLRKHI AGCLSDPDGVAMYY IGKT DGLV YRCVRGTNDVEGYH      LASY ASPALAQSVLLEFNFRWNLKMMVKNR                       DWDPS PVFPQW AA+DS DTGERSGL +S+W GE+  AW  A  E   A  DD GD+NGRTP+S+L  S+KLYA++MGE MPETRV+T+EE
Sbjct:  852 EQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYH------LASYSASPALAQSVLLEFNFRWNLKMMVKNR-----------------------DWDPSFPVFPQWQAAVDSVDTGERSGLGRSLWGGENAKAWNGAGHEASCAEVDDVGDVNGRTPLSHLALSAKLYARIMGEKMPETRVYTKEE 1078          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 5.560e-95
Identity = 168/339 (49.56%), Postives = 211/339 (62.24%), Query Frame = 3
Query: 1119 FGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAGRLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETRRD-ANVILTMYPLRDTTPALRSELQRPADGAAFSNSVAQVQPVPVGLS 2132
            FGN +D  S E LLR  + K V LL KHIE GCLSDP+GV +YY  G+   G+  +RCVRGTN  EGYHRYLR LL+SYCASPALA SVLLEFNFRWN++M VKNRGLP  +GE ++QY  E+IQR TA W P  P+FP+W +A+D ADTGERSGL+QS+W   SG     A  +++    D+        P+  LT S+K YA+ M   MP T VHT  E+RKF +E+    + PGE  GR Q +   NFD W+ +WN  C +I+ G V W  VYRKT+ QLE Y      + AN  +TM  ++     LR+ LQ    G  F   V  + P PV  S
Sbjct:    2 FGNVVDAKSGEKLLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAAGITTHRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSGLSQSMWGPASGG---DAPGDLV----DEQASPQHAIPMPKLTHSAKKYAETMNIGMPCTPVHTGAERRKFTSEMNSYLYVPGEARGRRQIYQTINFDRWSHEWNNHCAQIESGAVEWEAVYRKTSHQLESYYKNNVVERANSRVTMMAVQSMNNYLRARLQDGESGENFDGLVGTMAPPPVPRS 333          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 1.170e-82
Identity = 148/301 (49.17%), Postives = 200/301 (66.45%), Query Frame = 3
Query:  924 FLAPLSDRCLAL----VPLVPGRDRAASPRFHHRELV---KEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAEL 1805
            F+A L D C  +    +      ++A + +    E V   K+KN   F++ CRRLVP  + LL RF+ VI +F + +D  S E LLRP +R+AV LLRKHIE+GCLSDP+ V +YY  GK   G+   RCVRGTN  EGYHRY+R LL++YCASP+LA SVLLEFN+RWN++M VKNRGLP  +GE ++Q+ +E+IQR TA W P  P+FP+W +A+D+ADTGE+SGL++S+W   SG    S   +++    D+ G      P+  LT S+K YA+MM   MP T VHT  EKRK+ +EL
Sbjct:  203 FMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDVPSEPSDLV----DEQGLAQNAVPMPKLTHSAKKYAQMMHAGMPVTPVHTGAEKRKYASEL 499          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 3.150e-82
Identity = 135/161 (83.85%), Postives = 149/161 (92.55%), Query Frame = 3
Query: 1020 VKEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRAT 1502
             K+++ + FL++CRRLVPPP ELL RFDKV++EFGNC+DN S+EVLLRPKS KAV LLRKHI AGCLSDPDGVAMYY +GKT DGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLP+ LGEHYNQ+LVE+IQRAT
Sbjct:  606 AKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT 766          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 4.510e-74
Identity = 154/366 (42.08%), Postives = 208/366 (56.83%), Query Frame = 3
Query: 1020 VKEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADD----EVLRAGA---DDAGDINGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAGRLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETRRDANVILTMYPLRDTTPALRSELQRPADGAAFSNS 2096
            +K K+   FLK  RR VP P  LLARFD VI    +  D  + +VLL P + KAV LLR+HI  GC SDP GV +Y+  GKT  GL  +RCVRGTN  EGYHRYL+TLLA++CASP +  +VL+EFN RWN+   V+NRG+ + +G   +QY+++ IQRATA+W P  P+F  W A  D  D+GER+GLA SV   +   A    +D    E    GA   D  G ++ R     L  S++  A +M  + P T V T  EK KFR E+ Q YF+PG G+   +   R +F    V WN +C +I+ G   + P+ RKT   L+ Y  +    AN   T+ P+      L + L++P D      S
Sbjct:  316 MKAKDWGFFLKNARRRVPAPEVLLARFDAVISACKDIRDAKTGQVLLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTSTGLTRFRCVRGTNSTEGYHRYLKTLLAAFCASPEVCHTVLMEFNHRWNISRAVENRGMAAEIGGFSHQYMIDHIQRATAEWYPDQPLFSGWVAPADFEDSGERAGLAASVLTFDGKPAGADVEDSFSPEPSDGGATSTDMNGSVDHRLHALQLLPSARHLASLMRFSTPVTPVSTPAEKEKFRNEIFQ-YFRPGGGSSS-RDHQRIDFSKMVVDWNRWCQRIESGQEEYAPINRKTTGHLQNYYKQFTSSANFFNTLGPVHGPIGRLTASLRQPDDAVGSIRS 679          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 2.870e-54
Identity = 137/369 (37.13%), Postives = 203/369 (55.01%), Query Frame = 3
Query: 1014 ELVKEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVN-YRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGD----INGRTPVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAGRLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETRRDANVILTMYPLRDTTPALRSELQRPADGAAFSNSVAQ 2105
            E  K K+   FLKRCRRL+P P ELL RFD V   +G  ID  +++ L R ++ +A++ LR HI   C SD    A+Y+  GK  + L   +RC+RGTND+EGYH ++R LL ++C SP LA  +LLE+N+RWNL+  +KNRGL  ++G  Y+Q ++E IQR T+        + QW       DTGERSG  +S++        T +  E+L  GA+++G      +   P+  LT S+   AKM G  +P   V +  EK KF  ++   +  P   AGR Q  L  +FD +A++WN     +++G    +P++RKTA  L+ Y        N+  T+ P R     +R  L+ P D    +  +AQ
Sbjct:  763 EAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMR-LLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAK-YSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEIL-GGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTSAAEKAKF-GDMWLEFVDP---AGR-QTLL--DFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYWKAHHEQVNMRDTLRPARGRDAPIREHLRAPGDVGGPAGGLAQ 1121          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 4.750e-54
Identity = 98/165 (59.39%), Postives = 120/165 (72.73%), Query Frame = 3
Query: 1044 FLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQ 1538
            FL+ CRRLVP    LL RF+KVIE F + ID+ S E+LLRPK+  AV LLR+HIEA  LSDP+ VA+YY  GKT  G+ + RCVRGTN  EGYHR L  LL++YCASPALA S+LLEF  RWN+KM VKN  L   +G  ++Q+ +E+IQR T  WDP CPVF +
Sbjct:  269 FLRNCRRLVPERERLLKRFNKVIELFWDVIDSKSGEILLRPKAMDAVNLLRRHIEADRLSDPNDVALYYTTGKTTGGITSRRCVRGTNSTEGYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVKN--LSKEIGGCFDQFDIEIIQRETTSWDPDCPVFSE 431          
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Match: A0A6H5KP32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP32_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 4.950e-53
Identity = 109/248 (43.95%), Postives = 145/248 (58.47%), Query Frame = 3
Query: 1023 KEKN*ACFLKRCRRLVPPPRELLARFDKVIEEFGNCIDNDSREVLLRPKSRKAVRLLRKHIEAGCLSDPDGVAMYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQWPAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGD---INGRTPVSNLTASSKLYAKMMGENMPE 1757
            K++N   FL+ CRRLVP    LL RF+KVIE+F + ID+ S E+LLRPK+  A+ LLR+HIEA CL DPD VA+                                LL++YCASPALA S+LLEFN RWN+KM VKNR LP  +G  ++Q+ +E+IQR T  WD   PVF +  +A+D+ADTG+RSGLAQS+  G           +   +G D  G+   +    P+  +T S+  YA+MM   MPE
Sbjct:   10 KDRNWTYFLRNCRRLVPERERLLQRFNKVIEQFWDVIDSKSGEILLRPKAMDAIHLLRRHIEADCLIDPDDVAL--------------------------------LLSTYCASPALAHSILLEFNHRWNIKMAVKNRNLPKEIGGCFDQFDIEIIQRETTSWDLDSPVFSERVSALDAADTGQRSGLAQSMCGGA----------DAGDSGVDALGEQEMVQNAVPLPKITHSANEYARMMNVGMPE 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig73.13931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRJ6_9PHAE1.960e-14864.153'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KLP1_9PHAE9.050e-10646.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE2.610e-9768.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U3_9PHAE5.560e-9549.56Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE1.170e-8249.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Q9_ECTSI3.150e-8283.853'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K811_9PHAE4.510e-7442.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE2.870e-5437.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSM2_9PHAE4.750e-5459.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP32_9PHAE4.950e-5343.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig73contigP-fluviatile_contig73:343787..347386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score173.3
Seed ortholog evalue1.7e-40
Seed eggNOG ortholog2880.D7G3Q9
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons5
Model size2139
Cds size897
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig73.13931.1prot_P-fluviatile_contig73.13931.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig73 343787..344904 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817174.1955926-CDS-P-fluviatile_contig73:343786..3446081622817174.1955926-CDS-P-fluviatile_contig73:343786..344608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 343787..344608 -
1693571383.2925055-CDS-P-fluviatile_contig73:343786..3446081693571383.2925055-CDS-P-fluviatile_contig73:343786..344608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 343787..344608 -
1622817174.2054675-CDS-P-fluviatile_contig73:344829..3449041622817174.2054675-CDS-P-fluviatile_contig73:344829..344904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 344830..344904 -
1693571383.4800029-CDS-P-fluviatile_contig73:344829..3449041693571383.4800029-CDS-P-fluviatile_contig73:344829..344904Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 344830..344904 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817174.2149453-UTR-P-fluviatile_contig73:344904..3454791622817174.2149453-UTR-P-fluviatile_contig73:344904..345479Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 344905..345479 -
1693571383.6322424-UTR-P-fluviatile_contig73:344904..3454791693571383.6322424-UTR-P-fluviatile_contig73:344904..345479Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 344905..345479 -
1622817174.2243757-UTR-P-fluviatile_contig73:345650..3458261622817174.2243757-UTR-P-fluviatile_contig73:345650..345826Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 345651..345826 -
1693571383.6531703-UTR-P-fluviatile_contig73:345650..3458261693571383.6531703-UTR-P-fluviatile_contig73:345650..345826Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 345651..345826 -
1622817174.2338152-UTR-P-fluviatile_contig73:346234..3466581622817174.2338152-UTR-P-fluviatile_contig73:346234..346658Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 346235..346658 -
1693571383.6659107-UTR-P-fluviatile_contig73:346234..3466581693571383.6659107-UTR-P-fluviatile_contig73:346234..346658Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 346235..346658 -
1622817174.245665-UTR-P-fluviatile_contig73:347320..3473861622817174.245665-UTR-P-fluviatile_contig73:347320..347386Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 347321..347386 -
1693571384.123903-UTR-P-fluviatile_contig73:347320..3473861693571384.123903-UTR-P-fluviatile_contig73:347320..347386Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 347321..347386 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig73.13931.1

>prot_P-fluviatile_contig73.13931.1 ID=prot_P-fluviatile_contig73.13931.1|Name=mRNA_P-fluviatile_contig73.13931.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=299bp
MYYVIGKTKDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLL
EFNFRWNLKMMVKNRGLPSSLGEHYNQYLVELIQRATADWDPSCPVFPQW
PAAIDSADTGERSGLAQSVWAGESGSAWTSADDEVLRAGADDAGDINGRT
PVSNLTASSKLYAKMMGENMPETRVHTREEKRKFRAELAQNYFQPGEGAG
RLQQFLRYNFDGWAVKWNAFCDKIQQGTVPWVPVYRKTAKQLEEYLAETR
RDANVILTMYPLRDTTPALRSELQRPADGAAFSNSVAQVQPVPVGLSKT
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mRNA from alignment at P-fluviatile_contig73:343787..347386-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig73.13931.1 ID=mRNA_P-fluviatile_contig73.13931.1|Name=mRNA_P-fluviatile_contig73.13931.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3600bp|location=Sequence derived from alignment at P-fluviatile_contig73:343787..347386- (Porterinema fluviatile SAG_2381)
ATCAGCAAGTTCAAAGATCCCATCTTTAGCGCGGGACCAAGTGAAGTACC TGCTGCGGAGACGAAGGTAGGAATGGTTGTAGTGTACATTCCGTCGTCAG GTTTCGTAGGTATTATTTTGGAGCTTCACACGACTGTGCCTGTGATGGAT AAGGGACTTGCTTGTAGCCGGGCTAGAAGTGATTGAGTTGCACCAGAGAG CAGGTTGGGCTGCAGTCGGCGGAAAAATACAAAATTACAGGAAATAGATA ACCTGGCGTGAGAGCCAATGTATGATGGCGTGAGAGCCGAAATGGTGCGT GAGAGCACAGGGAATAATGGCGTGAGAGCCGGGATGGCGTGAGAGCCCAG GATGGCGTGAGAGCCGGGTTGGCGTGAGAGCCCAGGCGTGAGAGCCGTGA AAGGATTGGATTACACACACAAACACCGAACCCACCGAACACACACTCAC ACACTGAACAGAGAAACCAGAGACCCATCTGAGAAAGGGACAAACGTTGG TATGCCCAGCAAGTACGAAACCCCTTAATTCCTCCGAACATTTCAGTGGG ACATTTTCCTGTGTATTCCAAGAATCGAGTGGAAAATCAGACAATACTGT AAGTACATCCTTCAGCCTGTATGCAGTAGATCCGCGCTGTGGCTGTATCA GATGTACCTTACTTGTCCAAATTTATGCAGACAGCGGTTGTGGATACTTA GTTCATCTTCTGCCATTTTTTTCTACAGGTTCGGCTGTACAGCAACAACC ACGCGAGCTGTGTCGCTGTTGCGGAGGTTCAGACCGAAGAGGTGGCTCTT TCGCTGTTACGAAAGTGGAGGACGAGTCTGACTCTGGCTGGGAGGGCGGG GACTCGCAGTGGGGGGTTCATGCGCATTGTGGTGAAGGTGGTCGACGTCC TCAAGGGTGCCAGTTTCGTGCCGTACGATACTGCTCCTCCATCAGCACAA GATGGGCAGCGGCGCGTGTCGGTGGAGGGCGTGAAGAAGGGGGACGACGG CTGCGTCTTGTGGGACCTCGCACATGCTCGATTGGCGTCCGATCACCGCG CGTTTGAAGCCACGCCACTTCCAGGTGGCGGGGCGGATCCCGGTGCTTAC CATGACGAGTTCTTCGAGACGGAGACACCCCCACAGGCTGTCTACGGGAA CGGTGAGAACACAGTTTATGGAGACACGTTTTTTGTCTTTTTCGTGCAGC AGTTGTGAAGACCCGGTCTTACCGCGAAGTGAAAGTCGATACAAAAACTC AAAGCCTTTCTGTGATTGTGTGGAACCAAAACACAAGGCTTCCGTGAGGT TTTCAACTCTTTGGTTTTTGCCTTTTGGAAGCAGAAAAACAGTGTCCGAA AACGCTTTTTTTCCCTGTTTCCAAAAACCTGAAAATCAAATCGAATCTTC TTATGTGGAGGCGATTCGATTCTGATTGTTTATCTTTTTTCTTTTCTGTT TTGTGTGTGTTCGCTCCGTGATAAGACCCGCCCAAAGTTCACGCGCGCTA CGCGAAGACGATTTTGTCATCATATCCTTAACGACCCGTCGTTTCTATTT CCGCCCACAGGTGAGGGCGTCGAGAACGATCTGATATTCGATGATGGGGA CAGTGACGATGAGGGCGACGACGAGAGCGACGACGAGAGCGATGACGAGT GTGAGGCAGGTGCTGGTTTATCAAGCAGTGGAGGACCCAGAGCTAGCGCT AGCGGAGCGGGTGCTGATGTCACCGCGGCATCGCAGGTGATTTACACAGA AGTTTTGTTCAACATCAGTTTACGTGCTTGTTTCGTTCCAATGAATTTTC GATGTTCTTTACCTCTCGTAGTTCCTTTGGTCAACCTCAAAGCGCACTTG TGAACCAGACTCCGACCGCTCCTTGTCTGATGCCACGTCGTTCCGTGCTT GACACAGGAACGAGTGCCTGGCATGTTCTGTGTCCTGCTGGACCTGTTCC ATGCGCTCAACCGCTTGTCGAGGACGATCAAGAAACGCCACGGGGACTTC AGGCCGTTCATGGCGATGCGTGACGCCTGTTTTCTTGTCAACCGGGACGG TGTCGAACTGGCAAGTTGCCATCCGTTGGGGAGCTCAAAATGAATGCCCG CATAGTGTCAATTGCCAACAAGACGTATTTCTGACACCGTCGTCGACGTA TTATTTCATCCTTGTTTTTGGCCCCGCTGTCTGATCGTTGTCTTGCGCTG GTGCCGCTTGTTCCAGGTAGAGACCGTGCTGCGAGCCCGCGGTTTCACCA CCGAGAGCTGGTCAAGGAGAAGAACTAGGCTTGTTTCCTGAAGAGATGCC GACGTCTGGTCCCTCCGCCGAGAGAACTGCTGGCGCGCTTCGACAAGGTC ATCGAGGAGTTCGGCAACTGCATCGACAACGACTCTAGGGAGGTGCTTCT TCGCCCGAAATCGAGGAAAGCCGTGAGGCTGCTGCGAAAGCACATCGAGG CCGGGTGCTTGAGCGATCCTGACGGTGTCGCCATGTACTACGTGATTGGC AAGACCAAGGACGGTCTTGTCAATTATCGTTGCGTGCGCGGGACCAACGA TGTTGAGGTGAGATATTTGCAACTTGACTTGCGGTTTACTTCAGCACGTT GTCGTTTGTACAGCGCCCGGATTTGTACTCTGACACAAATTTCCAATTTG TTGGCTGGCTGTCTTCGCATGCAGTTTTTTCGCCTGTTTTTTGTGTTGAA AAAGGTTCCCCGAAAATGGCGACCAACCTCCCTGTTGCACATTTCTCCCC CGTCTTTCTGTCCCCTCTTTGATAACAGGGTTATCACCGCTACCTGCGCA CTCTGCTGGCCTCCTACTGCGCTTCACCGGCACTAGCGCAATCGGTCTTG CTGGAGTTCAACTTCCGGTGGAACCTGAAGATGATGGTCAAGAACCGTGG CTTGCCCTCGTCCTTGGGAGAGCACTACAACCAGTACCTGGTGGAGCTGA TCCAGCGGGCAACGGCAGACTGGGACCCGAGCTGCCCCGTCTTCCCGCAG TGGCCAGCCGCGATCGACTCAGCGGACACAGGCGAGAGGAGCGGGCTCGC CCAGAGCGTATGGGCGGGGGAGAGCGGGAGCGCATGGACCAGTGCCGACG ACGAGGTGCTGCGCGCTGGTGCGGACGACGCCGGTGATATCAACGGCCGA ACGCCGGTATCGAATCTCACGGCTTCGTCCAAGCTGTACGCGAAAATGAT GGGCGAGAACATGCCAGAGACTCGGGTTCACACCCGGGAAGAGAAGCGCA AGTTTCGGGCGGAGCTGGCTCAGAACTACTTTCAACCCGGCGAGGGCGCG GGTAGGCTTCAGCAATTTCTACGATACAACTTCGATGGATGGGCAGTCAA GTGGAACGCCTTCTGCGACAAGATCCAGCAGGGAACTGTTCCCTGGGTTC CGGTTTACCGGAAGACAGCCAAGCAGTTGGAGGAGTACCTCGCGGAGACA CGACGGGATGCGAACGTCATTTTGACGATGTACCCACTCCGCGACACCAC GCCAGCTCTCCGTTCCGAACTTCAACGGCCGGCGGATGGCGCAGCGTTCA GCAACTCAGTTGCACAGGTCCAGCCGGTTCCCGTGGGCTTGAGCAAGACT
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Coding sequence (CDS) from alignment at P-fluviatile_contig73:343787..347386-

>mRNA_P-fluviatile_contig73.13931.1 ID=mRNA_P-fluviatile_contig73.13931.1|Name=mRNA_P-fluviatile_contig73.13931.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1794bp|location=Sequence derived from alignment at P-fluviatile_contig73:343787..347386- (Porterinema fluviatile SAG_2381)
ATGTACTACGTGATTGGCAAGACCAAGGACGGTCTTGTCAATTATCGTTG
CGTGCGCGGGACCAACGATGTTGAGATGTACTACGTGATTGGCAAGACCA
AGGACGGTCTTGTCAATTATCGTTGCGTGCGCGGGACCAACGATGTTGAG
GGTTATCACCGCTACCTGCGCACTCTGCTGGCCTCCTACTGCGCTTCACC
GGCACTAGCGCAATCGGTCTTGCTGGAGTTCAACTTCCGGTGGAACCTGA
AGATGATGGTCAAGAACCGTGGCTTGCCCTCGTCCTTGGGAGAGCACTAC
AACCAGTACCTGGTGGAGCTGATCCAGCGGGCAACGGCAGACTGGGACCC
GAGCTGCCCCGTCTTCCCGCAGTGGCCAGCCGCGATCGACTCAGCGGACA
CAGGCGAGAGGAGCGGGCTCGCCCAGAGCGTATGGGCGGGGGAGAGCGGG
AGCGCATGGACCAGTGCCGACGACGAGGTGCTGCGCGCTGGTGCGGACGA
CGCCGGTGATATCAACGGCCGAACGCCGGTATCGAATCTCACGGCTTCGT
CCAAGCTGTACGCGAAAATGATGGGCGAGAACATGCCAGAGACTCGGGTT
CACACCCGGGAAGAGAAGCGCAAGTTTCGGGCGGAGCTGGCTCAGAACTA
CTTTCAACCCGGCGAGGGCGCGGGTAGGCTTCAGCAATTTCTACGATACA
ACTTCGATGGATGGGCAGTCAAGTGGAACGCCTTCTGCGACAAGATCCAG
CAGGGAACTGTTCCCTGGGTTCCGGTTTACCGGAAGACAGCCAAGCAGTT
GGAGGAGTACCTCGCGGAGACACGACGGGATGCGAACGTCATTTTGACGA
TGTACCCACTCCGCGACACCACGCCAGCTCTCCGTTCCGAACTTCAACGG
CCGGCGGATGGCGCAGCGTTCAGCAACTCAGTTGCACAGGTCCAGCCGGT
TCCCGTGGGCTTGAGCAAGACTGGTTATCACCGCTACCTGCGCACTCTGC
TGGCCTCCTACTGCGCTTCACCGGCACTAGCGCAATCGGTCTTGCTGGAG
TTCAACTTCCGGTGGAACCTGAAGATGATGGTCAAGAACCGTGGCTTGCC
CTCGTCCTTGGGAGAGCACTACAACCAGTACCTGGTGGAGCTGATCCAGC
GGGCAACGGCAGACTGGGACCCGAGCTGCCCCGTCTTCCCGCAGTGGCCA
GCCGCGATCGACTCAGCGGACACAGGCGAGAGGAGCGGGCTCGCCCAGAG
CGTATGGGCGGGGGAGAGCGGGAGCGCATGGACCAGTGCCGACGACGAGG
TGCTGCGCGCTGGTGCGGACGACGCCGGTGATATCAACGGCCGAACGCCG
GTATCGAATCTCACGGCTTCGTCCAAGCTGTACGCGAAAATGATGGGCGA
GAACATGCCAGAGACTCGGGTTCACACCCGGGAAGAGAAGCGCAAGTTTC
GGGCGGAGCTGGCTCAGAACTACTTTCAACCCGGCGAGGGCGCGGGTAGG
CTTCAGCAATTTCTACGATACAACTTCGATGGATGGGCAGTCAAGTGGAA
CGCCTTCTGCGACAAGATCCAGCAGGGAACTGTTCCCTGGGTTCCGGTTT
ACCGGAAGACAGCCAAGCAGTTGGAGGAGTACCTCGCGGAGACACGACGG
GATGCGAACGTCATTTTGACGATGTACCCACTCCGCGACACCACGCCAGC
TCTCCGTTCCGAACTTCAACGGCCGGCGGATGGCGCAGCGTTCAGCAACT
CAGTTGCACAGGTCCAGCCGGTTCCCGTGGGCTTGAGCAAGACT
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