prot_P-fluviatile_contig12.1588.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig12.1588.1
Unique Nameprot_P-fluviatile_contig12.1588.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length503
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 117..201
e-value: 2.2E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3379235..3380743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1588.1mRNA_P-fluviatile_contig12.1588.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig12 3379235..3380744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig12.1588.1 ID=prot_P-fluviatile_contig12.1588.1|Name=mRNA_P-fluviatile_contig12.1588.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=503bp
IALGVAIGSALKQTLFAGPGGLSGTLDLRKEVFEVQSFDPGSCKSEGDRA
AAFDMFFTSFMNYAMGGDLIDVLEGPPIPVGVKEMTQQELFRNYNAEVVR
KSQKLWTFLLGKIKDVSVWKRVNSTGSPQEGWRVLTGEFSVRASEAKEKY
QDEWSDLRQKGDESLMEYFRRAETIRANLCNSGGRLTDSECTKKIARGLR
DEFSTEKSIILTYPTPLTRGQLEGVLRQVTSERSRRSEEEENEGTRHALV
VAGMGRNGAGGGVARGQHAVSRDRQVVSSSSSAASSRGGETGELYCRMHG
YNDTHETRDCKKIQQLFNEFLETRFGPSSAGRGQTRDAGLHRGNGSFDGR
IRDGEWRMQQQYPIGPGGGNWSSGRPPYPSLGRGRGPGQGGRYSPHVMGR
GYGGNGVPSGFGGQSREGGAMQPVQLVVTRFSHSSPASTTTLRREVGDLL
RGSSSSTSNNSSSSSSGAKVDTDTVDTASRRWVMERELRPTRVFGVVAVN
RST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005162Retrotrans_gag_dom