mRNA_P-fluviatile_contig12.1588.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig12.1588.1
Unique NamemRNA_P-fluviatile_contig12.1588.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig12.1588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig12contigP-fluviatile_contig12:3379235..3380744 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1511
Cds size1509
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.7749796-CDS-P-fluviatile_contig12:3379234..33807431622815490.7749796-CDS-P-fluviatile_contig12:3379234..3380743Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3379235..3380743 +
1693562048.5990143-CDS-P-fluviatile_contig12:3379234..33807431693562048.5990143-CDS-P-fluviatile_contig12:3379234..3380743Porterinema fluviatile SAG_2381CDSP-fluviatile_contig12 3379235..3380743 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig12.1588.1prot_P-fluviatile_contig12.1588.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig12 3379235..3380743 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig12.1588.1

>prot_P-fluviatile_contig12.1588.1 ID=prot_P-fluviatile_contig12.1588.1|Name=mRNA_P-fluviatile_contig12.1588.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=503bp
IALGVAIGSALKQTLFAGPGGLSGTLDLRKEVFEVQSFDPGSCKSEGDRA
AAFDMFFTSFMNYAMGGDLIDVLEGPPIPVGVKEMTQQELFRNYNAEVVR
KSQKLWTFLLGKIKDVSVWKRVNSTGSPQEGWRVLTGEFSVRASEAKEKY
QDEWSDLRQKGDESLMEYFRRAETIRANLCNSGGRLTDSECTKKIARGLR
DEFSTEKSIILTYPTPLTRGQLEGVLRQVTSERSRRSEEEENEGTRHALV
VAGMGRNGAGGGVARGQHAVSRDRQVVSSSSSAASSRGGETGELYCRMHG
YNDTHETRDCKKIQQLFNEFLETRFGPSSAGRGQTRDAGLHRGNGSFDGR
IRDGEWRMQQQYPIGPGGGNWSSGRPPYPSLGRGRGPGQGGRYSPHVMGR
GYGGNGVPSGFGGQSREGGAMQPVQLVVTRFSHSSPASTTTLRREVGDLL
RGSSSSTSNNSSSSSSGAKVDTDTVDTASRRWVMERELRPTRVFGVVAVN
RST
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mRNA from alignment at P-fluviatile_contig12:3379235..3380744+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig12.1588.1 ID=mRNA_P-fluviatile_contig12.1588.1|Name=mRNA_P-fluviatile_contig12.1588.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1510bp|location=Sequence derived from alignment at P-fluviatile_contig12:3379235..3380744+ (Porterinema fluviatile SAG_2381)
ATCGCTTTGGGGGTGGCAATCGGCTCCGCCCTGAAACAGACACTCTTCGC
TGGCCCTGGGGGGCTTTCAGGCACGTTGGATTTGAGGAAGGAAGTGTTTG
AAGTGCAGAGTTTTGATCCAGGGTCGTGCAAATCGGAAGGTGATAGAGCG
GCTGCCTTCGACATGTTTTTTACAAGCTTCATGAACTATGCTATGGGGGG
GGATTTGATCGATGTGTTGGAAGGTCCTCCCATCCCAGTAGGGGTTAAAG
AGATGACGCAGCAGGAACTTTTCAGGAACTACAATGCCGAGGTAGTTCGG
AAATCCCAGAAGTTGTGGACATTTCTATTGGGAAAAATCAAGGATGTAAG
TGTCTGGAAGAGAGTGAATTCGACGGGAAGCCCACAGGAGGGATGGAGAG
TTCTGACTGGGGAGTTTTCGGTGAGAGCTTCTGAAGCTAAAGAGAAGTAC
CAGGACGAGTGGTCGGATCTAAGACAGAAGGGTGATGAGAGTCTGATGGA
GTACTTCAGACGCGCAGAGACGATCAGGGCGAACTTGTGCAATTCGGGTG
GCAGGCTGACAGACTCAGAGTGTACTAAGAAGATTGCCCGTGGGCTTCGC
GATGAATTTTCGACTGAGAAGAGCATTATTTTGACCTATCCTACCCCTCT
TACCCGAGGCCAACTCGAGGGTGTATTGCGACAGGTGACGAGCGAGAGGT
CGAGGCGGTCTGAGGAGGAAGAGAACGAGGGGACGAGGCACGCGCTCGTC
GTTGCCGGCATGGGCCGGAACGGCGCCGGCGGGGGAGTGGCGAGGGGTCA
GCATGCTGTATCGCGAGATCGACAAGTTGTCTCTTCGTCATCGTCGGCTG
CATCATCGCGCGGGGGAGAGACGGGCGAGCTCTACTGTCGTATGCACGGC
TACAACGACACCCACGAGACACGAGACTGCAAGAAGATCCAGCAGCTGTT
TAACGAGTTCCTGGAGACGCGCTTCGGGCCATCTTCAGCAGGACGGGGAC
AAACTCGTGACGCCGGGCTGCATCGAGGCAACGGATCTTTCGATGGGAGA
ATCCGCGACGGCGAGTGGCGTATGCAGCAGCAGTACCCCATCGGTCCTGG
TGGTGGTAACTGGAGCAGTGGGCGCCCACCGTACCCGAGTTTGGGCCGTG
GTCGTGGCCCAGGGCAGGGGGGGCGGTATAGTCCCCATGTCATGGGCCGC
GGGTACGGCGGTAATGGTGTCCCTTCAGGTTTCGGCGGTCAAAGCCGGGA
AGGGGGGGCTATGCAGCCCGTTCAACTCGTGGTCACGCGTTTTTCTCACA
GCAGCCCGGCGAGTACTACAACGCTCCGGAGGGAGGTTGGGGACCTCCTC
CGTGGGAGCAGCAGCAGTACGAGCAACAACAGCAGCAGCAGCAGCAGTGG
GGCGAAGGTGGATACGGATACGGTGGATACGGCCTCGCGGCGATGGGTTA
TGGAGCGGGAGCTGCGGCCGACCAGGGTTTTTGGGGTGGTGGCGGTGAAC
CGTTCGACGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig12:3379235..3380744+

>mRNA_P-fluviatile_contig12.1588.1 ID=mRNA_P-fluviatile_contig12.1588.1|Name=mRNA_P-fluviatile_contig12.1588.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3018bp|location=Sequence derived from alignment at P-fluviatile_contig12:3379235..3380744+ (Porterinema fluviatile SAG_2381)
ATCGCTTTGGGGGTGGCAATCGGCTCCGCCCTGAAACAGACACTCTTCGC
TGGCCCTGGGGGGCTTTCAGGCACGTTGGATTTGAGGAAGGAAGTGTTTG
AAGTGCAGAGTTTTGATCCAGGGTCGTGCAAATCGGAAGGTGATAGAGCG
GCTGCCTTCGACATGTTTTTTACAAGCTTCATGAACTATGCTATGGGGGG
GGATTTGATCGATGTGTTGGAAGGTCCTCCCATCCCAGTAGGGGTTAAAG
AGATGACGCAGCAGGAACTTTTCAGGAACTACAATGCCGAGGTAGTTCGG
AAATCCCAGAAGTTGTGGACATTTCTATTGGGAAAAATCAAGGATGTAAG
TGTCTGGAAGAGAGTGAATTCGACGGGAAGCCCACAGGAGGGATGGAGAG
TTCTGACTGGGGAGTTTTCGGTGAGAGCTTCTGAAGCTAAAGAGAAGTAC
CAGGACGAGTGGTCGGATCTAAGACAGAAGGGTGATGAGAGTCTGATGGA
GTACTTCAGACGCGCAGAGACGATCAGGGCGAACTTGTGCAATTCGGGTG
GCAGGCTGACAGACTCAGAGTGTACTAAGAAGATTGCCCGTGGGCTTCGC
GATGAATTTTCGACTGAGAAGAGCATTATTTTGACCTATCCTACCCCTCT
TACCCGAGGCCAACTCGAGGGTGTATTGCGACAGGTGACGAGCGAGAGGT
CGAGGCGGTCTGAGGAGGAAGAGAACGAGGGGACGAGGCACGCGCTCGTC
GTTGCCGGCATGGGCCGGAACGGCGCCGGCGGGGGAGTGGCGAGGGGTCA
GCATGCTGTATCGCGAGATCGACAAGTTGTCTCTTCGTCATCGTCGGCTG
CATCATCGCGCGGGGGAGAGACGGGCGAGCTCTACTGTCGTATGCACGGC
TACAACGACACCCACGAGACACGAGACTGCAAGAAGATCCAGCAGCTGTT
TAACGAGTTCCTGGAGACGCGCTTCGGGCCATCTTCAGCAGGACGGGGAC
AAACTCGTGACGCCGGGCTGCATCGAGGCAACGGATCTTTCGATGGGAGA
ATCCGCGACGGCGAGTGGCGTATGCAGCAGCAGTACCCCATCGGTCCTGG
TGGTGGTAACTGGAGCAGTGGGCGCCCACCGTACCCGAGTTTGGGCCGTG
GTCGTGGCCCAGGGCAGGGGGGGCGGTATAGTCCCCATGTCATGGGCCGC
GGGTACGGCGGTAATGGTGTCCCTTCAGGTTTCGGCGGTCAAAGCCGGGA
AGGGGGGGCTATGCAGCCCGTTCAACTCGTGGTCACGCGTTTTTCTCACA
GCAGCCCGGCGAGTACTACAACGCTCCGGAGGGAGGTTGGGGACCTCCTC
CGTGGGAGCAGCAGCAGTACGAGCAACAACAGCAGCAGCAGCAGCAGTGG
GGCGAAGGTGGATACGGATACGGTGGATACGGCCTCGCGGCGATGGGTTA
TGGAGCGGGAGCTGCGGCCGACCAGGGTTTTTGGGGTGGTGGCGGTGAAC
CGTTCGACGATCGCTTTGGGGGTGGCAATCGGCTCCGCCCTGAAACAGAC
ACTCTTCGCTGGCCCTGGGGGGCTTTCAGGCACGTTGGATTTGAGGAAGG
AAGTGTTTGAAGTGCAGAGTTTTGATCCAGGGTCGTGCAAATCGGAAGGT
GATAGAGCGGCTGCCTTCGACATGTTTTTTACAAGCTTCATGAACTATGC
TATGGGGGGGGATTTGATCGATGTGTTGGAAGGTCCTCCCATCCCAGTAG
GGGTTAAAGAGATGACGCAGCAGGAACTTTTCAGGAACTACAATGCCGAG
GTAGTTCGGAAATCCCAGAAGTTGTGGACATTTCTATTGGGAAAAATCAA
GGATGTAAGTGTCTGGAAGAGAGTGAATTCGACGGGAAGCCCACAGGAGG
GATGGAGAGTTCTGACTGGGGAGTTTTCGGTGAGAGCTTCTGAAGCTAAA
GAGAAGTACCAGGACGAGTGGTCGGATCTAAGACAGAAGGGTGATGAGAG
TCTGATGGAGTACTTCAGACGCGCAGAGACGATCAGGGCGAACTTGTGCA
ATTCGGGTGGCAGGCTGACAGACTCAGAGTGTACTAAGAAGATTGCCCGT
GGGCTTCGCGATGAATTTTCGACTGAGAAGAGCATTATTTTGACCTATCC
TACCCCTCTTACCCGAGGCCAACTCGAGGGTGTATTGCGACAGGTGACGA
GCGAGAGGTCGAGGCGGTCTGAGGAGGAAGAGAACGAGGGGACGAGGCAC
GCGCTCGTCGTTGCCGGCATGGGCCGGAACGGCGCCGGCGGGGGAGTGGC
GAGGGGTCAGCATGCTGTATCGCGAGATCGACAAGTTGTCTCTTCGTCAT
CGTCGGCTGCATCATCGCGCGGGGGAGAGACGGGCGAGCTCTACTGTCGT
ATGCACGGCTACAACGACACCCACGAGACACGAGACTGCAAGAAGATCCA
GCAGCTGTTTAACGAGTTCCTGGAGACGCGCTTCGGGCCATCTTCAGCAG
GACGGGGACAAACTCGTGACGCCGGGCTGCATCGAGGCAACGGATCTTTC
GATGGGAGAATCCGCGACGGCGAGTGGCGTATGCAGCAGCAGTACCCCAT
CGGTCCTGGTGGTGGTAACTGGAGCAGTGGGCGCCCACCGTACCCGAGTT
TGGGCCGTGGTCGTGGCCCAGGGCAGGGGGGGCGGTATAGTCCCCATGTC
ATGGGCCGCGGGTACGGCGGTAATGGTGTCCCTTCAGGTTTCGGCGGTCA
AAGCCGGGAAGGGGGGGCTATGCAGCCCGTTCAACTCGTGGTCACGCGTT
TTTCTCACAGCAGCCCGGCGAGTACTACAACGCTCCGGAGGGAGGTTGGG
GACCTCCTCCGTGGGAGCAGCAGCAGTACGAGCAACAACAGCAGCAGCAG
CAGCAGTGGGGCGAAGGTGGATACGGATACGGTGGATACGGCCTCGCGGC
GATGGGTTATGGAGCGGGAGCTGCGGCCGACCAGGGTTTTTGGGGTGGTG
GCGGTGAACCGTTCGACG
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