prot_P-fluviatile_contig72.13896.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig72.13896.1
Unique Nameprot_P-fluviatile_contig72.13896.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length375
Homology
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BLAST of mRNA_P-fluviatile_contig72.13896.1 vs. uniprot
Match: A0A6H5KA41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA41_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 5.050e-126
Identity = 199/272 (73.16%), Postives = 225/272 (82.72%), Query Frame = 0 
Query:  105 ATKAVKSAGVALAWYLTSTAAALAVSGATGGAVSA-PRPRRKYTALPLLVVAYALSRKDVKQRTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGRMAYTSVDSIVFVIFSRLLGFPFTQLFSVERLAHFQDPEFWLATVLASAIGFAVVAWSRRVGQGYLRSVCASALSPALQRLVVRPAKAVASVVGMGDGWDLGLTDEQRKARRPSIELRKSLSSFKDPDFHGDGSLGATGGAAF-QSPXXXXXXXXXXXGMDHSSNDGAPPDLKRSS 374
            A K +KSAGVALAWYL S+A ALA + ATGGA  A P+PR +YT LP+L++AYALSR D+K+RTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAG MAYTSVD IVF   SR +GFPF +L S +R+AH Q P+FW+AT LA A GFA+V W+RRVGQGYLRSVCASALSPA+ RL+VRPAKAVASV GMGDGWDLGLTDEQRKARRPSIELR+SLS+FKDPDFHGDG +G +GGAAF Q+P           G+D    DGAPPDLKRSS
Sbjct:  106 AKKVIKSAGVALAWYLASSAVALAATAATGGAARARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDCIVFFFLSRWVGFPFKELVSAQRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASALSPAMHRLLVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAPSPPPAA-----GVD----DGAPPDLKRSS 368
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA41_9PHAE5.050e-12673.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..137
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 220..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 239..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..374
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 115..137
NoneNo IPR availableTMHMMTMhelixcoord: 239..256
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:592615..607101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13896.1mRNA_P-fluviatile_contig72.13896.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig72 592485..608864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig72.13896.1 ID=prot_P-fluviatile_contig72.13896.1|Name=mRNA_P-fluviatile_contig72.13896.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=375bp
MTVQQQLFELAAAGAFALSVMPTATVSGFNFAPRIPSFSTAAPTFPIFPD
SSWSHGSRVQKSVAAVVCHPVSVINMTAETVCSAGSDDKQTAARSKHEGR
RGTVATKAVKSAGVALAWYLTSTAAALAVSGATGGAVSAPRPRRKYTALP
LLVVAYALSRKDVKQRTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGR
MAYTSVDSIVFVIFSRLLGFPFTQLFSVERLAHFQDPEFWLATVLASAIG
FAVVAWSRRVGQGYLRSVCASALSPALQRLVVRPAKAVASVVGMGDGWDL
GLTDEQRKARRPSIELRKSLSSFKDPDFHGDGSLGATGGAAFQSPPPPPL
EQQQQQGMDHSSNDGAPPDLKRSS*
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