prot_P-fluviatile_contig71.13820.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig71.13820.1
Unique Nameprot_P-fluviatile_contig71.13820.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length285
Homology
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A6H5LJ12_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ12_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 6.100e-106
Identity = 171/196 (87.24%), Postives = 186/196 (94.90%), Query Frame = 0
Query:   89 DDESPENIKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGPDPETLLVISHPDALKAAGAKGARSRAAAEAGRDG 284
            D ES  ++KVCFTGVKPTPKERSCMKKLGV+EVESVLEATHLVAGGSGV LKRTPKLLAGLGRCRFVVDVEWLYQSAK+GKLLDGVE++LCDAEAEK+W FNMRVSLGRRP+AGLL+GLSVHVDP V GVKGMGCPP EEMEMVV SAGG+WLPQ+PKRGGP+PE+LLVISHPDALKAAGAKGA+SRAAA AGR+G
Sbjct: 1347 DSESSCDVKVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVSLKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLSGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGAKSRAAAAAGRNG 1542          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: D7G2Z1_ECTSI (Chain A, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna Damage Checkpoint Protein 1, Mdc1 pdb|2ADO|B Chain B, Crystal Structure Of The Brct Repeat Region From The Mediator Of Dna n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z1_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 1.400e-105
Identity = 170/196 (86.73%), Postives = 185/196 (94.39%), Query Frame = 0
Query:   89 DDESPENIKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGPDPETLLVISHPDALKAAGAKGARSRAAAEAGRDG 284
            D +S  ++KVCFTGVKPTPKERSCMKKLGV+EVESVLEATHLVAGGSGV LKRTPKLLAGLGRCRFVVDVEWLYQSAK+GKLLDGVE++LCDAEAEK+W FNMRVSLGRRP+AGLLAGLSVHVDP V GVKGMGCPP EEMEMVV SAGG+WLPQ+PKRGGP+PE+LLVISHPDALKAAGAKG +SRAAA AGR+G
Sbjct: 1389 DSQSSGDVKVCFTGVKPTPKERSCMKKLGVSEVESVLEATHLVAGGSGVALKRTPKLLAGLGRCRFVVDVEWLYQSAKDGKLLDGVEYVLCDAEAEKKWGFNMRVSLGRRPEAGLLAGLSVHVDPCVAGVKGMGCPPLEEMEMVVISAGGQWLPQLPKRGGPEPESLLVISHPDALKAAGAKGTKSRAAAAAGRNG 1584          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A835YMU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.070e-34
Identity = 85/194 (43.81%), Postives = 113/194 (58.25%), Query Frame = 0
Query:   96 IKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPD-----AGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGPDPETLLVISHPDALKAAGAKGARSRAAAEAGRDG 284
            + VCFTG+ P   E +  KK GV  V+SV EATHL+A    VPLKRT KLLAGL  C  VV  EWL  S K         + + DA+AE++W FN+  +L R         G+L+G  VH  PA+ G  G+ CPPA E++ +V SAG +W P +  +GG D +TL+V++HPD    A     ++R  A AGR G
Sbjct: 1535 VAVCFTGIVPGAAELAAAKKAGVAIVDSVTEATHLIAS---VPLKRTAKLLAGLCACAHVVTPEWLLASGKRKAPAPEAAYTVKDADAEEKWKFNLAEALARAATLRAAGGGVLSGYRVHALPAMLGRSGLRCPPAAELKQIVESAGAEWAPSLRGKGG-DADTLIVLAHPDVCTTA-----KARKEAGAGRGG 1719          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A7S1GS46_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GS46_CYCTE)

HSP 1 Score: 93.6 bits (231), Expect = 4.440e-19
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 0
Query:  118 VNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILC-DAEAEKRWDFNMRVSLGR-----RPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPK-RGGPDPETLLVISHP 261
            +  ++    ATH++AG  G  L RTPKL+ GL     VV ++WL QSA++  +L    F+L  D +AE+++ FNMR +L R          LL G SV+V     GV G   PPAEE+ ++V++AGG WL    K RG  + E L++ S P
Sbjct:   82 IEHIKDAATATHVIAGEKGSTLLRTPKLMIGLCVTSNVVSIDWLIQSAEKKTVLPTDGFLLLRDRDAEQKYKFNMRKTLQRGELLRASGCSLLGGRSVYV---CKGVAGKRAPPAEELRLIVSAAGGTWLSTPSKLRGLGEDEALIITSDP 229          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A8J2SLB4_9STRA (RING-type E3 ubiquitin transferase BRCA1 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SLB4_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.070e-15
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 0
Query:   95 NIKVCFTGVKPTPKERSCMKKLGVNEVESVLE---ATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGR-RPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRG----GPDPETLLVI 258
            NIKV FT V  T KER+ +   G  +V++  E   ATHLV     VPLKRTPK LA +     VV ++WL QS +  + +D  +++  D +AE+ W F++  +L R R     LAG ++ +D         G P  +E++ +   AG +WL    K G    GP P    V+
Sbjct:  463 NIKVLFTAVDVTDKERAMLSAFGGVQVKAPREWRDATHLVCP---VPLKRTPKFLAAVSVVEHVVTLDWLRQSEQMARAVDAADYVPRDKKAERNWRFDLEETLARTRNGEKCLAGYALLLDHRARRDPKAGLPTDDELKAIAECAGAQWLLNPTKAGRRSTGPWPPRRGVV 631          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: UPI001ED875BE (uncharacterized protein LOC124158902 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED875BE)

HSP 1 Score: 84.3 bits (207), Expect = 1.680e-14
Identity = 53/151 (35.10%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   94 ENIKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQI 244
            E++ V FTG+   PK    +++LG + V++      LV       L+RT KLL  +GR   +V  +WL QS+  GK LD ++F++ D   EKR+DF+++ SL +     +L G      P+V        PP EE++ +VTSAGG+++P +
Sbjct: 2552 ESVNVLFTGLSD-PKLNHIVERLGGSVVDTPQNCNVLVTDR----LRRTYKLLCAIGRGIPIVTAQWLSQSSFSGKFLDPMDFLVSDKVTEKRFDFSLKSSLEKARVKPMLTGYRFIATPSVK-------PPPEEVQGIVTSAGGQYIPNL 2690          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: UPI00096B241D (mediator of DNA damage checkpoint protein 1-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B241D)

HSP 1 Score: 79.3 bits (194), Expect = 4.490e-13
Identity = 52/164 (31.71%), Postives = 86/164 (52.44%), Query Frame = 0
Query:   96 IKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGPDPETLLVIS 259
            + V FT +   P+  S +K LG N V+SV + T +V       +KRT KLL  +G+ + V   +W+  S K G+ LD  ++IL DAEAE +W+F ++ S+ R   + L A   VH+         M     E ++  + S GGK + ++P +  P+    +++S
Sbjct:  240 VNVAFTHMD-NPQLNSFVKTLGGNIVDSVDDCTVVVTEN----VKRTQKLLTAIGQGKPVCSPQWIRDSKKNGEFLDPWQYILKDAEAEAKWEFELKESILRATRSKLFANYVVHI---------MWDDRVEVLKAAIGSCGGKCVLRMPTKDCPERNNYIIVS 389          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A7S2XF98_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF98_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 2.000e-12
Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 0
Query:  139 LKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGR-RPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGPDPETLLVISHPDALK 265
            ++RT K L+GL RC+  V  +++ +S KE K LD  ++++ DAE EK++ F++  SLGR R  A +L G  V    +V        P  E+M+ +V  AGG+ LP+ P     D +TL+V S P+ LK
Sbjct:    5 VRRTTKFLSGLSRCQHAVHYKYVLESFKEKKWLDEDDYMIMDAEKEKKFGFSLPESLGRVRSGAKILEGKRVFQTTSVK-------PSYEDMKSIVECAGGEMLPRRPAPKSFDEDTLIV-SCPEDLK 124          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A672KIK3_SINGR (Mediator of DNA damage checkpoint protein 1-like n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A672KIK3_SINGR)

HSP 1 Score: 77.4 bits (189), Expect = 3.490e-12
Identity = 62/197 (31.47%), Postives = 96/197 (48.73%), Query Frame = 0
Query:   49 SAPQTPSRGSGRQGSASAALSPSSVPEAAYAGCSTDVAGADDESPENIKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIP 245
            + PQT SRG  R+ +A+ + SP   P        T        + +  KV FTG+     ER  + +LG +    V + THLV   +    +RT K L  + R   +V  +WL +  K G  L   E+IL DAE EK++ F+++ SL       LL G  +HV P+V        P   +M+ ++T  G ++LP++P
Sbjct: 1704 AVPQTNSRG--RKRAANTSASPEEAPSP------TPKTSRRSVAIQAHKVLFTGLTDQDGER-VVSRLGGSLARGVNDMTHLVTDKA----RRTVKFLCAVARGVPIVTPDWLKKCGKAGHFLSTDEYILKDAEQEKKFSFSLQKSLQTAESQPLLKGYEIHVTPSV-------IPEPSQMKEIITCCGARFLPKMP 1880          
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Match: A0A8C1WLJ5_CYPCA (Mediator of DNA damage checkpoint 1 n=9 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1WLJ5_CYPCA)

HSP 1 Score: 76.6 bits (187), Expect = 6.280e-12
Identity = 62/197 (31.47%), Postives = 96/197 (48.73%), Query Frame = 0
Query:   49 SAPQTPSRGSGRQGSASAALSPSSVPEAAYAGCSTDVAGADDESPENIKVCFTGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLGRCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPDAGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIP 245
            + PQT SRG  R+ +A+ + SP   P        T        + +  KV FTG+     ER  + +LG +    V + THLV   +    +RT K L  + R   +V  +WL +  K G  L   E+IL DAE EK++ F+++ SL       LL G  +HV P+V        P   +M+ ++T  G ++LP++P
Sbjct: 1597 AVPQTNSRG--RKRAANTSASPEEAPSP------TPKTSRRSVAIQAHKVLFTGLTDQDGER-VVSQLGGSLASGVNDMTHLVTDKA----RRTVKFLCAVARGVPIVTPDWLKKCGKAGHFLSTDEYILKDAEQEKKFSFSLQKSLQTAQTQPLLKGYEIHVTPSV-------MPEPSQMKEIITCCGARFLPKMP 1773          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig71.13820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5LJ12_9PHAE6.100e-10687.24BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G2Z1_ECTSI1.400e-10586.73Chain A, Crystal Structure Of The Brct Repeat Regi... [more]
A0A835YMU5_9STRA1.070e-3443.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1GS46_CYCTE4.440e-1939.74Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A8J2SLB4_9STRA1.070e-1535.47RING-type E3 ubiquitin transferase BRCA1 n=1 Tax=P... [more]
UPI001ED875BE1.680e-1435.10uncharacterized protein LOC124158902 n=1 Tax=Ischn... [more]
UPI00096B241D4.490e-1331.71mediator of DNA damage checkpoint protein 1-like n... [more]
A0A7S2XF98_9EUKA2.000e-1238.28Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A672KIK3_SINGR3.490e-1231.47Mediator of DNA damage checkpoint protein 1-like n... [more]
A0A8C1WLJ5_CYPCA6.280e-1231.47Mediator of DNA damage checkpoint 1 n=9 Tax=Cyprin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 87..198
e-value: 2.4E-21
score: 77.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 94..193
NoneNo IPR availablePANTHERPTHR23196PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEINcoord: 47..264
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 126..178
score: 9.806

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig71contigP-fluviatile_contig71:488204..492925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig71.13820.1mRNA_P-fluviatile_contig71.13820.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig71 488203..492925 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig71.13820.1 ID=prot_P-fluviatile_contig71.13820.1|Name=mRNA_P-fluviatile_contig71.13820.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=285bp
SAAAKRGGGDEPSGAVAAPTPSKSRRGRPTAAITAAAAAAAAAAEEDKSA
PQTPSRGSGRQGSASAALSPSSVPEAAYAGCSTDVAGADDESPENIKVCF
TGVKPTPKERSCMKKLGVNEVESVLEATHLVAGGSGVPLKRTPKLLAGLG
RCRFVVDVEWLYQSAKEGKLLDGVEFILCDAEAEKRWDFNMRVSLGRRPD
AGLLAGLSVHVDPAVPGVKGMGCPPAEEMEMVVTSAGGKWLPQIPKRGGP
DPETLLVISHPDALKAAGAKGARSRAAAEAGRDGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom