prot_P-fluviatile_contig7.13677.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13677.1
Unique Nameprot_P-fluviatile_contig7.13677.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length315
Homology
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: D8LML1_ECTSI (Heterogeneous nuclear ribonucleoprotein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML1_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 2.990e-104
Identity = 206/275 (74.91%), Postives = 213/275 (77.45%), Query Frame = 0
Query:   22 MGGVQGVGGVNGQVPQQMGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMVGHXXXXXXXXXXXXXXXXXXGDYSLEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGA-------DGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            MGGVQGVGGVNGQVPQQM PQ       XXXXXXXXXXXXXXXXXXXXX    XX    +                  GDYSLED LGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTR DGRGAGEAIVVLPN MEMQMALSRDKQHMGRRYIEIFQSKRM+YYSA+VGQLQSQN+ GGMQRQ                    DG+ M  VHTGVIRMRGLPFSATKQDV+NFFQGMPVTEDTIQFVVRGDGRVTGEAFVSF SPA+SE
Sbjct:    1 MGGVQGVGGVNGQVPQQMAPQQGIMSQGXXXXXXXXXXXXXXXXXXXXXGGVGXXXXXXNVQGAGMMGGGAMSTMSM-GDYSLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRRYIEIFQSKRMDYYSAVVGQLQSQNM-GGMQRQXXXXXXXXXXXXXXXXXXXPDGMAMPVVHTGVIRMRGLPFSATKQDVLNFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFSSPAESE 273          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A836CJZ5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ5_9STRA)

HSP 1 Score: 231 bits (589), Expect = 4.220e-72
Identity = 119/187 (63.64%), Postives = 139/187 (74.33%), Query Frame = 0
Query:  103 SLEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            +LE+ LGPFPCVRLRG+PFEAT+DDVLRFFQGL  +DVVM+ R DGRGAGEA+V+  NHM++ MALSRDKQHMGRRYIEIFQSKR +YY A  G                      G   A G    A HTGVIRMRGLPFSATK DV+NFFQG+ V ++++QFVVRGDGRVTGEAFV+  SPA++E
Sbjct:   27 ALEEVLGPFPCVRLRGMPFEATVDDVLRFFQGLTVVDVVMILRGDGRGAGEALVLFANHMDLNMALSRDKQHMGRRYIEIFQSKRADYYHASQGS---------------------GSAAATGQAGTAEHTGVIRMRGLPFSATKADVVNFFQGLNVLDESVQFVVRGDGRVTGEAFVTLSSPAEAE 192          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A822YFJ2_NELNU (RRM domain-containing protein n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A822YFJ2_NELNU)

HSP 1 Score: 159 bits (402), Expect = 1.590e-43
Identity = 90/180 (50.00%), Postives = 117/180 (65.00%), Query Frame = 0
Query:  110 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            PFP VRLRGLPF+ T  DVL FF GL  +DV+ V + +GR  GEA  VL   +++  A+ R++Q+MGRRYIE+F+SKR EYY A+  ++   +  GG  R+G     GP G   D    +  H+GV+R+RGLPFSA K DVI FF+   ++EDTI      DGR TGEAFV F SP DS+
Sbjct:   60 PFPAVRLRGLPFDCTEADVLEFFHGLDIIDVLFVHK-NGRFTGEAYCVLGYPLQVDFAIQRNRQNMGRRYIEVFRSKRQEYYKAVANEVS--DARGGSPRRG-----GPRGRSYDDGKDSVEHSGVLRLRGLPFSAGKDDVIEFFKDFKLSEDTIHITFNSDGRPTGEAFVEFASPEDSK 231          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A7S4NCM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCM0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.730e-42
Identity = 105/259 (40.54%), Postives = 136/259 (52.51%), Query Frame = 0
Query:  104 LEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQL------------------------------------QSQNVSGGMQRQ--------GHG----------GVGGPGGIGADGLGMAAV----------------HTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSEE 290
            LE  LG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG RYIE+FQ +R +YY+AI  Q                                     Q+ N    MQ+         G+G          GV G  GI  D   M  +                HTG +RMRGLPFSA+K++VI FF+G    +++I   VR DGR TGE +V+F SP D++E
Sbjct:  113 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHRYIEVFQGRRSDYYAAIAAQFFQNKENLVDADRRGEHVMPDEAGGGPVWGGVAAVPAQTLNHPASMQQARPQGAVMPGNGVIGETKKSGAGVRGGQGIRPDQGSMGHMGTRAPSHRGGGIREGEHTGYLRMRGLPFSASKEEVIGFFKGYNTVDESICLTVRSDGRATGEGYVAFMSPDDAKE 371          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A7S2WJG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJG1_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.160e-41
Identity = 104/268 (38.81%), Postives = 132/268 (49.25%), Query Frame = 0
Query:  104 LEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAI------------------VGQLQSQNVSGG------------------MQRQGHGGVG----GPGGIGAD-----------------------------------------GLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSEE 290
            LE  LGPFPC RLRGLPF+A  +DVL FFQGLV LDVV+V    GRG+GEA VV PN M+ Q+AL RD+Q MG RYIE+FQ KR +YY+AI                  +   Q  +V G                   MQ+ G GGV     G   +G++                                         G+     HTG +RMRGLPFSA+K+D+  FF+     ED+I    RGDGR TGE +++F  P D+E+
Sbjct:  112 LEAVLGPFPCARLRGLPFDAMPEDVLAFFQGLVVLDVVVVANSFGRGSGEAFVVFPNPMDFQVALQRDRQSMGHRYIEVFQGKRSDYYAAIASLFKQAGQSELPAEGETIRNTQDSSVQGNAWSGPAPPSSPDAVLIPLMQQLGSGGVSNHAPGTTAVGSNAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGI-QVGEHTGYLRMRGLPFSASKKDIFEFFKEYKPIEDSIVLTYRGDGRATGEGYIAFNQPNDAED 378          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A7R9WKK8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKK8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 6.560e-41
Identity = 103/257 (40.08%), Postives = 135/257 (52.53%), Query Frame = 0
Query:  104 LEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQL--QSQNVSGGMQRQGH------------GGVG-----------------------GPGGIGA---DGLGMAA-----------------------------VHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            LE  LG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG RYIE+FQ +R +YY+AI  Q     +NV    ++  H            GGVG                       G G IG    +G G+                                HTG +RMRGLPFSA+K++V  FF+G    E+++   VR DGR TGE +V+F SP D++
Sbjct:   95 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHRYIEVFQGRRSDYYAAIAAQFFQNKENVVDSDRQVEHEIPEEARAGPAWGGVGTVPAQQLNHPPMPQARPQGAVVPGNGVIGEMKKNGAGIRGGQXXXXXXXXXXXXXXRGPSHRGGGIREGEHTGYLRMRGLPFSASKEEVTEFFKGYNAVEESVCLTVRSDGRATGEGYVAFLSPDDAK 351          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A7S3BYF2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BYF2_9VIRI)

HSP 1 Score: 151 bits (381), Expect = 2.190e-40
Identity = 95/194 (48.97%), Postives = 121/194 (62.37%), Query Frame = 0
Query:  110 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGG------MQRQGHGGVGGPGGIGADGLGMA------AVHTGVIRMRGLPFSATKQDVINFFQGM--PVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            PFP VRLRGLP++AT +DV  FF GL  +DVVM+ R   R  GEA V+LPN ++ + AL R +Q+MGRRYIE+F SK+ +YYSA    L   ++SGG      +    H   G   G G  G GM       A HTGVI+MRGLPFS TKQ+++ FF     P+TED++   V+ DGR TGEAFV F  P  S+
Sbjct:   21 PFPVVRLRGLPYDATENDVAAFFSGLDVVDVVMLWRGQ-RPTGEAFVLLPNAVQAEFALQRSRQNMGRRYIEVFASKKSDYYSAAATAL---SMSGGGFDGHALGEHSHAHAGPRAGAGRGG-GMVGQGRPEAEHTGVIKMRGLPFSTTKQEILQFFGEFAGPLTEDSVFIRVQQDGRATGEAFVEFPGPEQSQ 209          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: UPI001CC5C739 (heterogeneous nuclear ribonucleoprotein F-like n=5 Tax=Proteaceae TaxID=4328 RepID=UPI001CC5C739)

HSP 1 Score: 149 bits (376), Expect = 9.990e-40
Identity = 85/180 (47.22%), Postives = 117/180 (65.00%), Query Frame = 0
Query:  110 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            PFP VRLRGLPF+ T  DV  FF GL  +D++ V + +GR +GEA VVL   +++  A+ R++Q+MGRRYIE+F+SKR EYY AI  ++   +  GG  RQ             D    +A HTGV+R+RGLPFSA K D+++FF+   ++ED+I   +  DGR TGEAFV F +P DS+
Sbjct:   55 PFPVVRLRGLPFDCTEADVTEFFHGLDIVDILFVHK-NGRFSGEAFVVLGYPIQVDFAIQRNRQNMGRRYIEVFRSKRQEYYKAIANEVS--DARGGSPRQSA-----RARSYDDAAKDSAQHTGVLRLRGLPFSAGKDDIMDFFKDFMLSEDSIHITLNMDGRPTGEAFVEFANPEDSK 226          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A200R9M0_9MAGN (RNA recognition motif domain n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R9M0_9MAGN)

HSP 1 Score: 148 bits (374), Expect = 1.980e-39
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 0
Query:  110 PFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            PFP VRLRGLPF+ +  D++ FFQGL  +DV++V +  GR +GEA  VL   +++  AL R++Q+MGRRY+E+F+SKR EYY AI  ++   +  GG  R+       P     D    +  HTGV+R+RGLPFSA K+DV++FF+   ++ED++      DGR TGEAFV F S  DS+
Sbjct:   56 PFPVVRLRGLPFDCSESDIVEFFQGLDIVDVLLVNK-SGRFSGEAFCVLGYPLQVDYALQRNRQNMGRRYVEVFRSKRQEYYKAIANEVS--DFRGGSPRRRA-----PRARSNDDAKDSVEHTGVLRLRGLPFSAGKEDVLDFFKEFVLSEDSVHIEFNSDGRPTGEAFVEFRSAVDSK 227          
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Match: A0A0D6R6G5_ARACU (RRM domain-containing protein n=4 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R6G5_ARACU)

HSP 1 Score: 148 bits (374), Expect = 2.140e-39
Identity = 80/179 (44.69%), Postives = 113/179 (63.13%), Query Frame = 0
Query:  111 FPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQSQNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDVINFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSE 289
            FP VRLRGLPF  +  DV  FF GL  +DV++V +  GR +GEA VVL   M++  AL RD+Q+MGRRY+E+F+ K+ +YY+A+  ++    V  G    G+      G    D +     HTG++++RGLPFSATK+D+I FF+   ++E  +  V   DGR TGEAFV F + ADS+
Sbjct:   58 FPVVRLRGLPFNCSESDVYEFFAGLDVVDVLLVHK-QGRFSGEAFVVLGAPMQVDFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEVNEPKVDDGAPPTGYS----KGSSDKDHM----EHTGILKLRGLPFSATKRDIIEFFRDYDLSESNVHIVTHSDGRATGEAFVEFSNSADSK 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LML1_ECTSI2.990e-10474.91Heterogeneous nuclear ribonucleoprotein, putative ... [more]
A0A836CJZ5_9STRA4.220e-7263.64RRM domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A822YFJ2_NELNU1.590e-4350.00RRM domain-containing protein n=2 Tax=Nelumbo nuci... [more]
A0A7S4NCM0_9STRA4.730e-4240.54Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2WJG1_9STRA1.160e-4138.81Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9WKK8_9STRA6.560e-4140.08Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3BYF2_9VIRI2.190e-4048.97Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
UPI001CC5C7399.990e-4047.22heterogeneous nuclear ribonucleoprotein F-like n=5... [more]
A0A200R9M0_9MAGN1.980e-3946.11RNA recognition motif domain n=1 Tax=Macleaya cord... [more]
A0A0D6R6G5_ARACU2.140e-3944.69RRM domain-containing protein n=4 Tax=Araucariacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 113..183
e-value: 0.0022
score: 27.3
coord: 235..307
e-value: 0.41
score: 10.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 109..202
e-value: 2.2E-22
score: 81.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 229..292
e-value: 6.7E-15
score: 56.8
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 104..285
NoneNo IPR availablePANTHERPTHR13976:SF71RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 104..285
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 223..288
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 100..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:3369047..3376584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13677.1mRNA_P-fluviatile_contig7.13677.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 3369047..3376584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13677.1 ID=prot_P-fluviatile_contig7.13677.1|Name=mRNA_P-fluviatile_contig7.13677.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=315bp
IHQGGYGVGANGQGMGVNHNHMGGVQGVGGVNGQVPQQMGPQGGIMGQGM
GQGMGQGMGQGMGQGMGQGMGQGIGQGMVGHGNVGGGMMAGGGMSAMGMG
DYSLEDALGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRPDGRG
AGEAIVVLPNHMEMQMALSRDKQHMGRRYIEIFQSKRMEYYSAIVGQLQS
QNVSGGMQRQGHGGVGGPGGIGADGLGMAAVHTGVIRMRGLPFSATKQDV
INFFQGMPVTEDTIQFVVRGDGRVTGEAFVSFGSPADSEERKPYGHPIRG
ALPFHSGGDRAAHE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf