prot_P-fluviatile_contig7.13617.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig7.13617.1
Unique Nameprot_P-fluviatile_contig7.13617.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length359
Homology
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BLAST of mRNA_P-fluviatile_contig7.13617.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.790e-116
Identity = 166/211 (78.67%), Postives = 183/211 (86.73%), Query Frame = 0 
Query:  137 EGGAPKKPKKGLLGLGDRLAARAAAIAKTAGNAINTIAGGRRHRETPAYAKAACFKRCNCDQGVPTDSTAFVPLQEGRTVHHAAVGKVMVRTEPLAGAELDFENRPPLAQTPPPPYALRLFLEYMDGRTVARCAHVSSEWHRECYQRSEEGLPIHPTYVGIHGMELDSSVDACQDKIDGLFFHQPPSGSSGQLFTSGQRNVTAWRRLETEV 347
            E G PKKPKKGLLGLGDRLAARAAAIAKTAGNA+  + G  R RETP +A+AACF+RCNC+ GVPTDSTAFVPLQEGR + H AVG V VRTEPL GAEL+FENRPPL +TPPPPY LRLFLEYMD RTVARCAH S EWHRECYQR+EEG+P+HP Y+G+H MEL S VDACQDKIDG+FFHQPP+GS GQLFT+GQR VTAWRR ETEV
Sbjct:   95 EDGTPKKPKKGLLGLGDRLAARAAAIAKTAGNALQAVTGEGRRRETPPWARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPLERTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRRQETEV 305
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13617.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LMJ5_ECTSI1.790e-11678.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..123
NoneNo IPR availableGENE3D2.20.28.140coord: 4..36
e-value: 1.6E-5
score: 26.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 10..29
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 6..35
score: 8.377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:2623016..2631380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13617.1mRNA_P-fluviatile_contig7.13617.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig7 2622837..2636114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig7.13617.1 ID=prot_P-fluviatile_contig7.13617.1|Name=mRNA_P-fluviatile_contig7.13617.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=359bp
MAVAVSDGEWLCKQCKHENPDVEEFCDKCFAPRKASAAPRETCRTCGHRH
VMGKLCHVFVANNRRWKRKTSKWNNPKRPAGEEGTTAEDSEQEGGSDGQE
EEEEEEDEEEEEEEDEGDDSEDESSDNSSDLSGSQDEGGAPKKPKKGLLG
LGDRLAARAAAIAKTAGNAINTIAGGRRHRETPAYAKAACFKRCNCDQGV
PTDSTAFVPLQEGRTVHHAAVGKVMVRTEPLAGAELDFENRPPLAQTPPP
PYALRLFLEYMDGRTVARCAHVSSEWHRECYQRSEEGLPIHPTYVGIHGM
ELDSSVDACQDKIDGLFFHQPPSGSSGQLFTSGQRNVTAWRRLETEVRRD
SRLSRGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2