prot_P-fluviatile_contig68.13352.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig68.13352.1
Unique Nameprot_P-fluviatile_contig68.13352.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length114
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig68.13352.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.530e-38
Identity = 72/112 (64.29%), Postives = 87/112 (77.68%), Query Frame = 0 
Query:    3 QVHYAGLDSLAAVPLHEHVHQRTSPLYTEPRPDMESLPAETTLRLYTASKTRFVAEGKLVGYGERRWGDTRLVVGRKEGGATGMVVPLTKKHIPGALALHSREYGGDPQALD 114
            Q+ YAGLDS A V L+ HV+ R  P+YTEPRPD+ SLPA+TTLRLYT + TR V EG L GYGE+ WG+T L +GR+EGG T MVV LTKK+IPGALAL+    GG+PQAL+
Sbjct:  450 QITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGEQTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALE 561
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig68.13352.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KSD7_9PHAE1.530e-3864.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig68contigP-fluviatile_contig68:486280..486621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig68.13352.1mRNA_P-fluviatile_contig68.13352.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig68 485945..486621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig68.13352.1 ID=prot_P-fluviatile_contig68.13352.1|Name=mRNA_P-fluviatile_contig68.13352.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=114bp
MTQVHYAGLDSLAAVPLHEHVHQRTSPLYTEPRPDMESLPAETTLRLYTA
SKTRFVAEGKLVGYGERRWGDTRLVVGRKEGGATGMVVPLTKKHIPGALA
LHSREYGGDPQALD
back to top