prot_P-fluviatile_contig68.13373.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig68.13373.1
Unique Nameprot_P-fluviatile_contig68.13373.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length120
Homology
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BLAST of mRNA_P-fluviatile_contig68.13373.1 vs. uniprot
Match: D7G3I8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I8_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.380e-14
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0 
Query:    7 PSGVVEFLTPSLFIAAVLATALRQLGLPIGGLS-TVFLYLVLDFLAFRLGRKQPGLKRLNRS 67
            P GV  FLTPSL +AA +ATALRQLG+P+GGLS  V+LYLVLD LAFR  R QPGL+R  +S
Sbjct:   10 PVGVSAFLTPSLVLAATVATALRQLGVPVGGLSFAVWLYLVLDLLAFRFRRAQPGLERPQQS 71
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig68.13373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3I8_ECTSI5.380e-1467.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 9..28
NoneNo IPR availableTMHMMTMhelixcoord: 32..54
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig68contigP-fluviatile_contig68:718605..719813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig68.13373.1mRNA_P-fluviatile_contig68.13373.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig68 718389..719813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig68.13373.1 ID=prot_P-fluviatile_contig68.13373.1|Name=mRNA_P-fluviatile_contig68.13373.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp
MGSAWAPSGVVEFLTPSLFIAAVLATALRQLGLPIGGLSTVFLYLVLDFL
AFRLGRKQPGLKRLNRSFTSSSEALPPGGSGVSGGGTVGGTSGGDGTAVQ
GGQQSPHAPDGAHWVERGGG
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