prot_P-fluviatile_contig67.13267.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig67.13267.1
Unique Nameprot_P-fluviatile_contig67.13267.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length835
Homology
BLAST of mRNA_P-fluviatile_contig67.13267.1 vs. uniprot
Match: A0A6H5JTI3_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI3_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 1.150e-58
Identity = 631/855 (73.80%), Postives = 670/855 (78.36%), Query Frame = 0
Query:    1 MRVRAFMESAVPAAWVIPAPPRLQTDPSHTHAPH--RRRTLPSSSQALRSSGGEG------ISARIRSRCMVHPIYAGKQQLEREGPRGRYDDALGHKHDHGTTAQAAPVDGSICGRNGAMEDTAASKDDASEKKRRFRHRVIPMKVQQQALISRLRTLEARRDWRGVLAAMDSARNEKVPMSKTVYNTAILAIAKSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKDSPFWQRPNSRTFXXXXXXXXXXXXXXXXXXXXAQLRAGRTEEGGEPLDADTVSFNATINALGRGGEWKKAVALLREMAKAGKGVKPNEXXXXXXXXXXXXXXXXXXXXXXXXXXRELGLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGLEVLRRSQQVKPSKPDPCSLXXXXXXXXXXXXXXHARSILPQLTALAGNAGADAWISETMDIFETC--------EPRCR-----YVREHRRFTCNIRSLSGDTSNHSTPKATAREVRHGRASRSGSPKRTAGPIDGSSSSFPGNVHPIHPLGGAIGGKVGEARWKKTDPAPELLVKLSHRGQST 834
            MR R  +   VPA WV+ AP RLQ D S  HA    RRR LP S+ A    G EG      +  R   R  + P+ AG        P G    A+ H+HD       + +DG I            ++D   E K   RHR+ P++VQQQALI RLRTLEARRDWRGVLAAMDSARNE++PMS+TVYN AI+AIAKSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+DSP WQ+PNSRT XXXXXXXXXXXXXXXXXXXX   RAG+ +EGGEPL+ADTVSFNATINALGRGGEWKKAVALLREM +AG GVKPNEXXXXXXXXXXXXXXXXXXXXXXXXX REL L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    VLR+SQQVKPSKPDPCSL              HAR+ILP LTALAGN GADAWI ETM IF  C        EP         +R        I +++GD + H+       + R GR   S  P   A P           VH +HPLGGA+GGKVGEAR   TD AP++LVKLSH G +T
Sbjct:    1 MRGRPTVGHGVPA-WVVQAP-RLQRDASAVHALGYVRRRALPGSTHAFGPCGEEGREHGGYLGGRRPYRHAIPPLRAGM-------PLGEEGSAV-HRHDGTAGDPCSTLDGGIA--------RTLTRDARREDKGLVRHRLSPIQVQQQALIRRLRTLEARRDWRGVLAAMDSARNEQMPMSRTVYNKAIIAIAKSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEDSPQWQQPNSRTXXXXXXXXXXXXXXXXXXXXXXXXRAGQVKEGGEPLEADTVSFNATINALGRGGEWKKAVALLREMTRAGLGVKPNEXXXXXXXXXXXXXXXXXXXXXXXXXMRELXLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRQSQQVKPSKPDPCSLGAAVEMCCRAGKLDHARAILPHLTALAGNEGADAWIRETMGIFNACIGDLEARDEPPINGNEGDELRPPASDDKTI-AITGDLNTHAASGEETNQQRRGRPKLSKGPTERAVPFK--------EVHQLHPLGGAVGGKVGEARRLATDHAPDVLVKLSHGGNAT 828          
BLAST of mRNA_P-fluviatile_contig67.13267.1 vs. uniprot
Match: D7FQT1_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT1_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 6.670e-28
Identity = 84/182 (46.15%), Postives = 97/182 (53.30%), Query Frame = 0
Query:  666 VLRRSQQVKPSKPDPCSLXXXXXXXXXXXXXXHARSILPQLTALAGNAGADAWISETMDIFETCEPRCRYVREHRRFTCN----IR---------SLSGDTSNHSTPKATAREVRHGRASRSGSPKRTAGPIDGSSSSFPGNVHPIHPLGGAIGGKVGEARWKKTDPAPELLVKLSHRGQST 834
            VLR+SQQVKPSKPDPCSL              HAR+ILP LTALAGN GADAWI ETM IF  C       RE      N    +R         +++GD +  +       + R GR   S  P   A P           VH +HPLGGA+GGKVGEAR   TD AP+LLVKLSH G +T
Sbjct:  348 VLRQSQQVKPSKPDPCSLGAAVEMCCRAGKLDHARAILPHLTALAGNEGADAWIRETMGIFNACIGDLE-AREEPAVNGNEDDELRPPASDDKTIAITGDLNTQAASGEETNQQRRGRPKLSKGPTERAVPFK--------EVHQLHPLGGAVGGKVGEARRLATDHAPDLLVKLSHGGNAT 520          
BLAST of mRNA_P-fluviatile_contig67.13267.1 vs. uniprot
Match: D7FQT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT2_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.450e-21
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   89 HKHDHGTTAQAAPVDGSICGRNGAMEDTAASKDDASEKKRRFRHRVIPMKVQQQALISRLRTLEARRDWRGVLAAMDSARNEKVPMSKTVYNTAILAIAKSGR 191
            H+HD       + +DG I            ++D     K   RHR+ P++VQQQALI RLRTLEARRDWRGVLAAMDSARNE++PMS+TVYN AI+AIAKSGR
Sbjct:   11 HQHDGTAGDPCSTLDGGIA--------RTLTRDARGGNKGLVRHRLSPIQVQQQALIRRLRTLEARRDWRGVLAAMDSARNEQMPMSRTVYNKAIIAIAKSGR 105          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig67.13267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JTI3_9PHAE1.150e-5873.80PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D7FQT1_ECTSI6.670e-2846.15PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
D7FQT2_ECTSI3.450e-2157.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 331..445
e-value: 6.3E-26
score: 92.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 451..568
e-value: 3.7E-24
score: 87.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 569..738
e-value: 9.6E-27
score: 96.1
coord: 142..317
e-value: 1.0E-41
score: 145.3
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 511..670
e-value: 1.9E-9
score: 37.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 361..409
e-value: 1.4E-9
score: 38.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 548..574
e-value: 0.0014
score: 16.6
coord: 212..245
e-value: 2.7E-7
score: 28.3
coord: 611..642
e-value: 4.2E-5
score: 21.4
coord: 400..433
e-value: 1.5E-8
score: 32.3
coord: 363..392
e-value: 1.9E-4
score: 19.4
coord: 178..211
e-value: 3.9E-4
score: 18.4
coord: 472..503
e-value: 0.0028
score: 15.7
coord: 247..279
e-value: 2.0E-6
score: 25.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 199..258
e-value: 4.8E-12
score: 45.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 282..310
e-value: 0.17
score: 12.2
coord: 436..464
e-value: 0.26
score: 11.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 10.008
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 538..572
score: 10.073
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 7.903
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 608..642
score: 10.008
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 433..467
score: 9.767
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 398..432
score: 12.847
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 11.608
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 643..678
score: 5.338
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 280..314
score: 8.287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 573..607
score: 9.81
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 468..502
score: 9.164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 10.282
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 679..709
score: 6.577
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 245..279
score: 10.786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 503..537
score: 8.232
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 492..703
coord: 360..502
coord: 171..346
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..834
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig67contigP-fluviatile_contig67:183980..192277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig67.13267.1mRNA_P-fluviatile_contig67.13267.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig67 183874..193957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig67.13267.1 ID=prot_P-fluviatile_contig67.13267.1|Name=mRNA_P-fluviatile_contig67.13267.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=835bp
MRVRAFMESAVPAAWVIPAPPRLQTDPSHTHAPHRRRTLPSSSQALRSSG
GEGISARIRSRCMVHPIYAGKQQLEREGPRGRYDDALGHKHDHGTTAQAA
PVDGSICGRNGAMEDTAASKDDASEKKRRFRHRVIPMKVQQQALISRLRT
LEARRDWRGVLAAMDSARNEKVPMSKTVYNTAILAIAKSGRWRETLAWVQ
NMKSDGLSPDVYSYAGCIDACAKAAQWKKACQILEQMREAGVKPNGYAFN
SAINACGKAHKWREALALLQQMEREGVLVTTVTLNAAVDACGNAGEWRTS
LKMLENMQSKDSPFWQRPNSRTFNIAIKACAEVAEWETALELLAQLRAGR
TEEGGEPLDADTVSFNATINALGRGGEWKKAVALLREMAKAGKGVKPNEI
SYNSAIHACGRGGQWKLALSLLKEMRELGLPPDQISFGAVANALGKAGEW
TLLLELLEEMEADGNPPTNVAFKAAVDCCSKAGEWQHSVALIKSMRTTGY
PPTVLSLASVISACGRSGQWEVAIALLNETRKYGPSATASVYVATAQACA
RAGEWEEATGLMEMMKVDGVRPTEKFYMALLRATGEGGRTDKTLEILDEM
KKVGLTPGVRSYNCAVGACGKAGSWQHAMTLLAEMYVEGMRPAGFAVAAT
IRACSSAGEWRKGLEVLRRSQQVKPSKPDPCSLGAAIAMCCRAGEWEHAR
SILPQLTALAGNAGADAWISETMDIFETCEPRCRYVREHRRFTCNIRSLS
GDTSNHSTPKATAREVRHGRASRSGSPKRTAGPIDGSSSSFPGNVHPIHP
LGGAIGGKVGEARWKKTDPAPELLVKLSHRGQST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long
IPR002885Pentatricopeptide_repeat