prot_P-fluviatile_contig66.13199.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig66.13199.1
Unique Name	prot_P-fluviatile_contig66.13199.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	234

Homology

[Close]

BLAST of mRNA_P-fluviatile_contig66.13199.1 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 5.660e-39
Identity = 83/177 (46.89%), Postives = 112/177 (63.28%), Query Frame = 0

Query:   57 SRLFIPMVRAHRGGLRSWTRAPVIPIEGDDFGGNAAAAGRESLLVLARQGGEIAEEFRAFCTKNLTQESFDFIVAAVQYEAM----VSRGVEGDLDKQFQSFDHILRQFFLPTSPDEINVEFKMRRRITSFGTREAFGQLDDDARRFILQESLSEIVRMLEQNLWKKFTRYVSLREG 229
            S L +PMVRAHRGG+++W RA V+P+   D     +A   + ++ LA  GGE+AE+F  FC +NL  ES+DF+V  V+YE M    ++R  E   D+QF  F HIL  + LPTSPDEIN+   M +RI  F TREAF +L  + R  I +E   EIVR+LEQNL  KF + ++L  G
Sbjct:  158 SGLLLPMVRAHRGGVKAWFRATVVPV---DETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPE---DEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLGLEERVSIFKEPFDEIVRVLEQNLLNKFQKLIALDRG 328

[Close]

BLAST of mRNA_P-fluviatile_contig66.13199.1 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.530e-30
Identity = 80/206 (38.83%), Postives = 109/206 (52.91%), Query Frame = 0

Query:   57 SRLFIPMVRAHRGGLRSWTRAPVIPIEGDDFGGNAAAAGRESLLVLARQGGEIAEEFRAFCTKNLTQESFDFIVAAVQYEAMVS------------------------RGV---------EGDLDKQFQSFDHILRQFFLPTSPDEINVEFKMRRRITSFGTREAFGQLDDDARRFILQESLSEIVRMLEQNLWKKFTRYVSLREG 229
            S L +PMVR HRGG+++W RA V+P+   D     +A   + ++ LA   GE+AE+F  FC +NL  ES+D +V  V+YE MV                          G+         E   D+Q + F HIL  + LPTSPDEIN+   M +RI  F TREAF +L  + R  I +E   EIVR+LEQNL  KF + ++L  G
Sbjct:  284 SGLLLPMVRTHRGGVKAWFRATVVPV---DETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLSLEERVSIFKEPFDEIVRVLEQNLLNKFQKRIALDRG 486

[Close]

BLAST of mRNA_P-fluviatile_contig66.13199.1 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.630e-9
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0

Query:    1 PYLSRAVRLVIIYSKEYRAKYARFVKWKTILRVWCVIIVGLATRASLFWGRNPAHSS 57
            PY  R VRLV+ Y++ YRAK+ARFVKW  ++R+W    +GL  RA  F+G  P H S
Sbjct:   93 PYFIRVVRLVVAYNQSYRAKFARFVKWTPMMRIWAGATIGLVLRAVFFFGSKPVHFS 149

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig66.13199.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig66.13199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5K5R8_9PHAE	5.660e-39	46.89	RGS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5KE83_9PHAE	1.530e-30	38.83	RGS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L0L8_9PHAE	1.630e-9	50.88	RGS domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016137	RGS domain	PFAM	PF00615	RGS	coord: 111..222 e-value: 4.1E-7 score: 30.3
IPR016137	RGS domain	PROSITE	PS50132	RGS	coord: 113..222 score: 10.558
None	No IPR available	GENE3D	1.20.58.1850		coord: 102..228 e-value: 4.1E-13 score: 51.1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 50..233
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..49
None	No IPR available	TMHMM	TMhelix		coord: 30..49
IPR036305	RGS domain superfamily	SUPERFAMILY	48097	Regulator of G-protein signaling, RGS	coord: 111..222

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig66	contig	P-fluviatile_contig66:318495..322580 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig66.13199.1	mRNA_P-fluviatile_contig66.13199.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig66 318495..322580 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig66.13199.1 ID=prot_P-fluviatile_contig66.13199.1|Name=mRNA_P-fluviatile_contig66.13199.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=234bp
PYLSRAVRLVIIYSKEYRAKYARFVKWKTILRVWCVIIVGLATRASLFWG
RNPAHSSRLFIPMVRAHRGGLRSWTRAPVIPIEGDDFGGNAAAAGRESLL
VLARQGGEIAEEFRAFCTKNLTQESFDFIVAAVQYEAMVSRGVEGDLDKQ
FQSFDHILRQFFLPTSPDEINVEFKMRRRITSFGTREAFGQLDDDARRFI
LQESLSEIVRMLEQNLWKKFTRYVSLREGEALL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016137	RGS
IPR036305	RGS_sf