prot_P-fluviatile_contig65.13131.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig65.13131.1
Unique Nameprot_P-fluviatile_contig65.13131.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length114
Homology
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: D7G8V9_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8V9_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 7.700e-52
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0
Query:    1 SASAFVPTTSFAGSRVVAPVHASSPSSAALSMAASDMVGASAPLGFFDPMGFSKGPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            SASAFVP+ SF GS V +    +S  S A+SMAASDMVGASAPLGFFDPMGFSKGPAERL AYRE+ELKHGRTAMLAVVGFLTQENWHPLYNG LSSNP+KAITEVPPEGL Q
Sbjct:   13 SASAFVPSASFVGSPVSSVTRPAS--STAVSMAASDMVGASAPLGFFDPMGFSKGPAERLNAYREAELKHGRTAMLAVVGFLTQENWHPLYNGGLSSNPVKAITEVPPEGLFQ 123          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S0XDX8_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDX8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.450e-27
Identity = 55/79 (69.62%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   36 DMVGASAPLGFFDPMGFSKGPA-ERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            ++VGASAPLGFFDP GFSKG + E L  YRESELKHGR AMLAV+G+LTQE +HP Y G LS NPL A  EVPP G +Q
Sbjct:   37 ELVGASAPLGFFDPFGFSKGVSDETLFKYRESELKHGRVAMLAVLGWLTQERFHPFYEGKLSGNPLVAFGEVPPLGFVQ 115          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S3IA89_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3IA89_9SPIT)

HSP 1 Score: 99.0 bits (245), Expect = 8.220e-24
Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 0
Query:   36 DMVGASAPLGFFDPMGFSK--GPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            DMVGA  PLGFFDP+GFSK   PA  +A +RE+ELKHGR AMLA  G +T + +HPLY+G LSSNPL AI +VP  GLLQ
Sbjct:   19 DMVGACKPLGFFDPLGFSKDASPAS-MAKFREAELKHGRVAMLACAGMITADKFHPLYDGKLSSNPLLAIAQVPKLGLLQ 97          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S3AG67_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG67_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 3.290e-23
Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   36 DMVGASAPLGFFDPMGFSKGPA-ERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            DMVG+SAPLGFFDP+GFSK  + E +  +RE+ELKHGR AMLAV G +T + +HPL+ G  SSNPL A+T+VP  G LQ
Sbjct:   47 DMVGSSAPLGFFDPLGFSKDASPETMKKFREAELKHGRVAMLAVFGMITADKFHPLFGGQCSSNPLLALTQVPKLGWLQ 125          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: I2CPJ1_NANGC (Protein fucoxanthin chlorophyll a c protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPJ1_NANGC)

HSP 1 Score: 97.8 bits (242), Expect = 4.640e-23
Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   30 LSMAASDMVGASAPLGFFDPMGFS-KGPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            ++M    M+G+SAP   FDP+GF+ K   + L  YRESELKHGR AMLAV+G++ QE WHPLY+G LSSNPLKA+TEVP  G  Q
Sbjct:   35 VNMGLDGMIGSSAPFKNFDPLGFAAKADQKTLNKYRESELKHGRVAMLAVLGWVVQEVWHPLYDGKLSSNPLKALTEVPLIGWAQ 119          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: Q2IA68_ISOGA (Chloroplast light harvesting protein isoform 11 n=1 Tax=Isochrysis galbana TaxID=37099 RepID=Q2IA68_ISOGA)

HSP 1 Score: 97.4 bits (241), Expect = 4.960e-23
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   37 MVGASAPLGFFDPMGFSK--GPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            MVG SAPLGFFDP GFSK   PA  +A +RE+ELKHGR AMLA  G +T + +HPLY+G LSSNPL AI++VP  GLLQ
Sbjct:   38 MVGDSAPLGFFDPFGFSKEASPAS-MAKFREAELKHGRVAMLASAGMITADKFHPLYDGKLSSNPLLAISQVPKLGLLQ 115          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A0G4GBS7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GBS7_VITBC)

HSP 1 Score: 98.2 bits (243), Expect = 1.740e-22
Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 0
Query:   37 MVGASAPLGFFDPMGFSKGPA-ERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            ++G+SAPLGFFDP+GF+K  + + +A  RE ELKHGR AM AV+G++TQ  +HPLY G LS++PLKAITEVP  G++Q
Sbjct:   99 LIGSSAPLGFFDPLGFTKNKSTQEIARLRECELKHGRLAMFAVLGWMTQTVFHPLYGGKLSADPLKAITEVPAPGIIQ 176          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S3TFW5_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TFW5_EMIHU)

HSP 1 Score: 95.1 bits (235), Expect = 5.280e-22
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 0
Query:   37 MVGASAPLGFFDPMGFSKGPA-ERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            MVG   PLG+FDP+GFSK  + E +A +RE+ELKHGR AMLA  G +T + +HPL+ G LSSNPL AIT+VP  GLLQ
Sbjct:   49 MVGDCKPLGYFDPLGFSKDASPETMAKFREAELKHGRVAMLACAGMITADKFHPLFGGKLSSNPLLAITQVPKLGLLQ 126          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S0E1K9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E1K9_9EUKA)

HSP 1 Score: 94.0 bits (232), Expect = 1.010e-21
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 0
Query:   26 SSAALSMAASDMVGASAPLGFFDPMGFSKGPA-ERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            SS A+ M    ++G  APL +FDP+GFSK  + E +  YRE+ELKHGR AMLA  G +TQ+ WHPL++G LS+NPL AI + P  G++Q
Sbjct:   23 SSVAVQMKVGGLIGDCAPLAYFDPLGFSKDASPETMKKYREAELKHGRVAMLAAWGMITQDAWHPLFDGKLSANPLLAIIQTPKLGVIQ 111          
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Match: A0A7S4B2U4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B2U4_CHRCT)

HSP 1 Score: 94.0 bits (232), Expect = 1.420e-21
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 0
Query:   37 MVGASAPLGFFDPMGFSK--GPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPLKAITEVPPEGLLQ 113
            +VG SAPLGFFDP+G++K   PA+ L  YRE ELKHGR AMLA +G +  + WHPLY G  S+NPL AIT+VP  GLLQ
Sbjct:   55 LVGDSAPLGFFDPLGYTKKASPAD-LKKYRECELKHGRVAMLASMGMVVADFWHPLYGGGNSANPLVAITQVPKAGLLQ 132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8V9_ECTSI7.700e-5282.30Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A7S0XDX8_9STRA5.450e-2769.62Hypothetical protein n=2 Tax=Chromulina nebulosa T... [more]
A0A7S3IA89_9SPIT8.220e-2465.00Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A7S3AG67_9EUKA3.290e-2362.03Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
I2CPJ1_NANGC4.640e-2360.00Protein fucoxanthin chlorophyll a c protein n=1 Ta... [more]
Q2IA68_ISOGA4.960e-2365.82Chloroplast light harvesting protein isoform 11 n=... [more]
A0A0G4GBS7_VITBC1.740e-2260.26Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S3TFW5_EMIHU5.280e-2261.54Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0E1K9_9EUKA1.010e-2152.81Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S4B2U4_CHRCT1.420e-2162.03Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 16..109
e-value: 3.2E-15
score: 58.4
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 37..89
e-value: 3.8E-16
score: 60.0
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 16..113
NoneNo IPR availablePANTHERPTHR21649:SF63coord: 16..113
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 26..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig65contigP-fluviatile_contig65:276485..279442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig65.13131.1mRNA_P-fluviatile_contig65.13131.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig65 276484..279442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig65.13131.1 ID=prot_P-fluviatile_contig65.13131.1|Name=mRNA_P-fluviatile_contig65.13131.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=114bp
SASAFVPTTSFAGSRVVAPVHASSPSSAALSMAASDMVGASAPLGFFDPM
GFSKGPAERLAAYRESELKHGRTAMLAVVGFLTQENWHPLYNGSLSSNPL
KAITEVPPEGLLQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln