mRNA_P-fluviatile_contig64.13110.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig64.13110.1
Unique NamemRNA_P-fluviatile_contig64.13110.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: D8LH79_ECTSI (Lactoylglutathione lyase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH79_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 1.220e-41
Identity = 93/209 (44.50%), Postives = 118/209 (56.46%), Query Frame = 1
Query:  592 TSFQGRPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIADADKH 1218
            +S Q RPFKILGLQQVAIGG +K+ ++ +    +   K G  S  S++ ++   + +     +                     + +  L         + P DPT                      RV  PALNHIGLWVHPL ECVEWLTRQGMRFTPGGIR+GA+GHDVAFIHPKGD + PL GEGVLIELVQAPPD++A+A++ 
Sbjct:   22 SSLQERPFKILGLQQVAIGGLEKKALARLWSDTLGVEKVG--SYESKKENVREDILKLGHGVN---------------------AVEIDL---------MEPLDPT-------------------IPPRVQTPALNHIGLWVHPLPECVEWLTRQGMRFTPGGIRQGASGHDVAFIHPKGDVNFPLSGEGVLIELVQAPPDIVANAERQ 179          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A7S2XWR1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.630e-36
Identity = 87/214 (40.65%), Postives = 114/214 (53.27%), Query Frame = 1
Query:  577 FSAISTSFQGRPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIADADKH 1218
            F+  S S   RPF++LGLQQVAIGG DK+ ++ +   L+   + G        +D              D       +  T  +L +                 + P DP      +  PK             VH+P LNHIG+WV PL   VEWLT++GMRFTPGGIR+GA+GHDV FIHPKG++  PL G+GVL+ELVQAPP+VIA+ DKH
Sbjct:   23 FTIRSFSAGSRPFRVLGLQQVAIGGLDKKPLTDLWGDLLGLEEVGTFKSQKENVD-------------EDI--FHLGKGPTAVELDL-----------------MAPLDP------NVAPK-------------VHMPPLNHIGIWVDPLPAAVEWLTQKGMRFTPGGIRRGASGHDVCFIHPKGNEKTPLSGQGVLLELVQAPPEVIAEFDKH 185          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A2W6W300_9RHOO (Lactoylglutathione lyase n=2 Tax=Betaproteobacteria TaxID=28216 RepID=A0A2W6W300_9RHOO)

HSP 1 Score: 140 bits (353), Expect = 1.780e-35
Identity = 85/201 (42.29%), Postives = 107/201 (53.23%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRL--DLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIA 1203
            RPF+ILGLQQ+AIGGPD+  +                    RRL  DLF      D ++  +            + + +  S  + +      +  ++P DP ++                    RV  P LNHIGLWV  L   VEWLT QGMRFTPGGIR+GAAGHD+ FIHPKG++  PLCGEGVLIELVQAPP+VIA
Sbjct:    3 RPFRILGLQQIAIGGPDRMKL--------------------RRLWVDLFGLGLEGDFTSERE---------NVVEDIAVLGSGAHRVE-----VDLMQPLDPAKKP-------------------RVDEPPLNHIGLWVDDLPTAVEWLTAQGMRFTPGGIRRGAAGHDIVFIHPKGNEDFPLCGEGVLIELVQAPPEVIA 150          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A7W0Q8M6_9DELT (VOC family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7W0Q8M6_9DELT)

HSP 1 Score: 138 bits (347), Expect = 2.050e-34
Identity = 91/217 (41.94%), Postives = 110/217 (50.69%), Query Frame = 1
Query:  553 DVVSIQC*FSAISTSFQGRPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDY-ILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVI 1200
            DV S     +A ++    RPF+ILGLQQ+AIG P K   + ++ L V               DLF        S    FR               + + D  IL      +  + P D +R                     RVH P LNH+GLWV  L  CVEWL+ QG+RFTPGGIR+GAAGHDV FIHPKGD ++PL GEGVLIELVQAPPDVI
Sbjct:    3 DVTSSAGATTATTSGTTARPFRILGLQQIAIGAPSK---ASLRHLWV---------------DLFGL------SVVGSFR-------------SDKENVDEDILSIAGVEIDLMEPIDQSRSP-------------------RVHEPRLNHLGLWVDDLRACVEWLSGQGVRFTPGGIRRGAAGHDVCFIHPKGDAASPLSGEGVLIELVQAPPDVI 163          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A386C6A1_9BACT (VOC family protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A386C6A1_9BACT)

HSP 1 Score: 136 bits (342), Expect = 5.320e-34
Identity = 82/199 (41.21%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIA 1203
            RPF+ILG+QQ+AIGGP K  +  +   L+  + H         +D                                    + IL      +  + P DP +       PK             VH P LNH+GLWV  L   VEWLT+QG+RFTPGGIRKGAAGHDV FIHPKG+ + P  GEGVLIELVQAPPDVIA
Sbjct:    2 RPFRILGVQQIAIGGPSKAALRGLWVDLLGVSAHSTFRSERENVD------------------------------------EDILALAGVEIDLMEPIDPEK------SPK-------------VHEPRLNHLGLWVDNLAVAVEWLTQQGVRFTPGGIRKGAAGHDVCFIHPKGNDTAPRSGEGVLIELVQAPPDVIA 145          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A7V9L974_9DELT (VOC family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9L974_9DELT)

HSP 1 Score: 136 bits (342), Expect = 5.820e-34
Identity = 84/199 (42.21%), Postives = 104/199 (52.26%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDY-ILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVI 1200
            RPF++LGLQQ+AIGGP K+ +  +                   +DLF         A+  FR               + + D  IL      +  + P DP +       PK             VH P LNH+GLWV  L + VEWLT QG+RFTPGGIRKGAAGHDV FIHPKGD ++P  GEGVLIELVQAPPD++
Sbjct:    3 RPFRVLGLQQIAIGGPSKKALRGLW------------------VDLFGIP------ATGTFR-------------SEKENVDEDILSLAGVEIDLMEPIDPAK------SPK-------------VHEPRLNHLGLWVDDLPKAVEWLTAQGVRFTPGGIRKGAAGHDVCFIHPKGDDTSPRSGEGVLIELVQAPPDLV 145          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A4D9CY79_9STRA (VOC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CY79_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.230e-34
Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 1
Query:  589 STSFQGRPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVI 1200
            S++   RPF++LGLQQVAIG  DK     +   ++     G        +D             + FR   P  C    ++ +                 ++P DP +       PK             VHVPALNHIGLWVHPLT  VE+L++QG+RFTPGGIR+GAAGHDV FIHPKG++ +PL GEGVLIELVQAPP+V+
Sbjct:    9 SSALLPRPFRVLGLQQVAIGALDKSGPCRLWGDVLGVPMTGTYKSEKENVD------------EDIFRVGAPD-CPWAVEIDL-----------------MQPIDPAK------APK-------------VHVPALNHIGLWVHPLTAAVEYLSKQGVRFTPGGIRRGAAGHDVCFIHPKGNEKSPLSGEGVLIELVQAPPEVV 163          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A4R7I4B0_9ACTN (Lactoylglutathione lyase n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I4B0_9ACTN)

HSP 1 Score: 135 bits (341), Expect = 8.530e-34
Identity = 83/200 (41.50%), Postives = 103/200 (51.50%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIAD 1206
            RPFK+LG+QQ+AIGG DK  ++ +   L    K G     S  +D    + R  S          PH                        +  ++P DP R       PK             VHVP LNH+GLW+  L   VEWLT QGMRFTPGGIRKGA+G+DV F+HPKG+   P  GEGVLIELVQAPP+V+A+
Sbjct:    3 RPFKVLGIQQIAIGGLDKGALTGLWSGLFGIEKVGDYVSESENVD--EDILRLGSG---------PHAVE---------------------IDLMQPLDPER------SPK-------------VHVPTLNHVGLWIDDLPAAVEWLTEQGMRFTPGGIRKGASGYDVCFLHPKGNDETPRSGEGVLIELVQAPPEVVAE 151          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A849Z0T8_9DELT (VOC family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A849Z0T8_9DELT)

HSP 1 Score: 135 bits (341), Expect = 9.050e-34
Identity = 81/201 (40.30%), Postives = 107/201 (53.23%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIADA 1209
            RPF+ILG+QQ+A+GGPDK  +  +   L+  T+ G  +  S R ++   +    S A                      + +  L         ++P DP ++                    RVH P LNHIGLWV  L   VEWL + G+RF PGGIRKGAAGHDV FIHP+GD+++PL GEGVLIELVQAPP+V+  A
Sbjct:    4 RPFRILGVQQIAVGGPDKARLRTLWIDLLGLTQAG--TFRSERENVDEDIVTVGSGA---------------------HAVEIDL---------MQPIDPEKKP-------------------RVHEPPLNHIGLWVDDLAAAVEWLQKAGVRFAPGGIRKGAAGHDVCFIHPRGDQTSPLSGEGVLIELVQAPPEVLRAA 153          
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Match: A0A1B3LSE5_9PROT (Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=5 Tax=Methyloversatilis TaxID=378210 RepID=A0A1B3LSE5_9PROT)

HSP 1 Score: 135 bits (340), Expect = 1.180e-33
Identity = 84/200 (42.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:  607 RPFKILGLQQVAIGGPDKEVISPIQFLLVAHTKHGL*SKSSRRLDLFSCVCR*DSSASNDFR*IQPHRCRTRQQLCIRRSTDYILPCVPRFMV-FVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLTECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELVQAPPDVIA 1203
            RPF+ILGLQQ+AIGGPD+     ++ L V               D+F            DF         T ++  +      +     R  V  ++P DP+++                    RV  PALNH+GLWV  L + VEW+T QGMRFTPGGIR+GAAG D+ FIHPKG++  PLCGEGVLIELVQAPP+VIA
Sbjct:    3 RPFRILGLQQIAIGGPDR---MKLRHLWV---------------DVFGL------DLEGDF---------TSERENVVEDIAVLGTGPTRVEVDLMQPLDPSKKP-------------------RVDEPALNHVGLWVDDLPKAVEWMTAQGMRFTPGGIRRGAAGFDIVFIHPKGNEQFPLCGEGVLIELVQAPPEVIA 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig64.13110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LH79_ECTSI1.220e-4144.50Lactoylglutathione lyase, putative n=1 Tax=Ectocar... [more]
A0A7S2XWR1_9STRA6.630e-3640.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2W6W300_9RHOO1.780e-3542.29Lactoylglutathione lyase n=2 Tax=Betaproteobacteri... [more]
A0A7W0Q8M6_9DELT2.050e-3441.94VOC family protein n=1 Tax=Deltaproteobacteria bac... [more]
A0A386C6A1_9BACT5.320e-3441.21VOC family protein n=1 Tax=uncultured bacterium Ta... [more]
A0A7V9L974_9DELT5.820e-3442.21VOC family protein n=1 Tax=Deltaproteobacteria bac... [more]
A0A4D9CY79_9STRA7.230e-3441.67VOC domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A4R7I4B0_9ACTN8.530e-3441.50Lactoylglutathione lyase n=1 Tax=Ilumatobacter flu... [more]
A0A849Z0T8_9DELT9.050e-3440.30VOC family protein n=1 Tax=Polyangiaceae bacterium... [more]
A0A1B3LSE5_9PROT1.180e-3342.00Glyoxalase/Bleomycin resistance /Dioxygenase super... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig64contigP-fluviatile_contig64:881013..883521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.4
Seed ortholog evalue9.9e-34
Seed eggNOG ortholog2880.D8LH79
EggNOG free text desc.Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
EggNOG OGs2CXQD@1,2RZ24@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Ec32 orthologEc-24_000860.1
Exons2
Model size1813
Cds size342
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig64.13110.1prot_P-fluviatile_contig64.13110.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig64 881605..882642 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817060.9263034-UTR-P-fluviatile_contig64:881012..8816041622817060.9263034-UTR-P-fluviatile_contig64:881012..881604Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 881013..881604 -
1693570983.166774-UTR-P-fluviatile_contig64:881012..8816041693570983.166774-UTR-P-fluviatile_contig64:881012..881604Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 881013..881604 -
1622817060.9658482-UTR-P-fluviatile_contig64:882642..8835211622817060.9658482-UTR-P-fluviatile_contig64:882642..883521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 882643..883521 -
1693570983.442361-UTR-P-fluviatile_contig64:882642..8835211693570983.442361-UTR-P-fluviatile_contig64:882642..883521Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 882643..883521 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817060.939628-CDS-P-fluviatile_contig64:881604..8818481622817060.939628-CDS-P-fluviatile_contig64:881604..881848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 881605..881848 -
1693570983.1839716-CDS-P-fluviatile_contig64:881604..8818481693570983.1839716-CDS-P-fluviatile_contig64:881604..881848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 881605..881848 -
1622817060.9514265-CDS-P-fluviatile_contig64:882544..8826421622817060.9514265-CDS-P-fluviatile_contig64:882544..882642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 882545..882642 -
1693570983.426182-CDS-P-fluviatile_contig64:882544..8826421693570983.426182-CDS-P-fluviatile_contig64:882544..882642Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 882545..882642 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig64.13110.1

>prot_P-fluviatile_contig64.13110.1 ID=prot_P-fluviatile_contig64.13110.1|Name=mRNA_P-fluviatile_contig64.13110.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=114bp
MVFVRPSDPTRRSWHSFGPKYWGSQKSVRTRVRVHVPALNHIGLWVHPLT
ECVEWLTRQGMRFTPGGIRKGAAGHDVAFIHPKGDKSNPLCGEGVLIELV
QAPPDVIADADKH*
back to top

mRNA from alignment at P-fluviatile_contig64:881013..883521-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig64.13110.1 ID=mRNA_P-fluviatile_contig64.13110.1|Name=mRNA_P-fluviatile_contig64.13110.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2509bp|location=Sequence derived from alignment at P-fluviatile_contig64:881013..883521- (Porterinema fluviatile SAG_2381)
GCATCGGCATCGCACCATTCTGAGTACACCCGCGAATCTGACCAGGAGAT GGTCCGCCATACCCCAGGTAACTGTAATCGATTATACGCTGACGACGGTC TGTATCGCGACCATCAAGATATCCATCTCACGACAGGTGCCACTACTTTA GAGGCGAAGAACAAATGAGTCTAGACGCTGCACCGTAGTTCGCATGTGTT GCAGAACCTTTGCCACAGCCACACGGGAGGTGTGCCGAAGCTTTCTCCCG ATCTCGTTCCCTCGTTCCTGCGTATGCTAATAGATTTTTTTGTGGTTTGA ACATCGATGCGTCCCCCGGTTTCGTGCTCGCCTGGTGATCTCGAGTGCAG CCCGCAGCTTGTTGCTGTGCCGAAAAGTACGGCTCCGACAATCGAGAACC CTTCACCGCCAGGGCCCTTGCCCCCCCAACCCCTCATACGCAGCCATGGT ACACATGCGACGAATGCTCCGGTACGTGGGCTCCACTTAGCCATTTTTCG GCAGTGTTTTCGATTTAACAGTCGAAGCTTCATTCACCAGCGGTGAAGCT TCGATGTAGTTAGCATCCAATGCTGATTTTCCGCCATATCAACTTCCTTC CAGGGACGGCCATTCAAGATCCTCGGGCTGCAGCAGGTTGCGATCGGAGG ACCCGACAAGGAGGTGATATCCCCGATACAGTTTTTGCTGGTCGCGCACA CGAAGCATGGATTATGATCCAAAAGTTCTAGAAGGCTGGATCTTTTTTCT TGCGTGTGCAGGTGAGACTCGTCTGCATCCAACGATTTTCGTTAAATCCA ACCACATCGATGTCGTACAAGACAACAACTGTGTATTAGACGATCCACTG ATTACATTCTTCCTTGTGTACCCCGTTTCATGGTGTTTGTTCGGCCATCT GACCCCACGCGTAGGTCTTGGCACAGCTTTGGACCGAAATACTGGGGATC CCAAAAATCGGTTCGTACAAGAGTGAGGTGAGCGATCGACCAATTTTACA ACAGCTTGTTTCACAATGTCGCTTGAGACCGTCTACCTTTTCTCCAAGTT TGCTTAAGCTGGTTCGATGGCCAAGGCAGGTGCTGAGACGGGAGGTTGAT CCCCCGACAAGTCCCAAGCAACAAATCAGAATGGTGAAAGTTCGCTATTT CTTACAAGGACGTATACGGGGAAGGGATTATCTCCTAACGTTGTCTCAAC TTTCTCGACTGAGCAATGGCGCATTTTGGGGCATGGGTGACCGACCGATT GCTTGAGAGTGTTCGCGGGAGAGAAGCTCCCGAGCCCGTTCCAGCAGCAA AGGCAAGAGCTGGGGGTCCCCAATCCGATGAACTGGCGTGGCCCAGCCAC TCTCAAGTCACAGCTGCATATCTTGAGCGTGAAAGGGGAACGAGACTTGA CGCGGGTTGCATTGCATTCTTCGCGCCTGTGCCTCCCTCATTTCGTAGAA AGAGAATGTTTGCGAAGACATCCTCAAGCTCGGCCAAGGCGTGAGCGCCG TGGAAATCGACCTGATGGAGCCTATTGATCCCGAGAAGGCACCGAGGTGA GAGTCGGCTGCTGGCCTACCGCCGTCATGCAAGTTCTCGATGCCTCCACC AAGTTTGTTTGATCACAGTCGAGAGTGACTGACAACCCAGCACGCGTGCT CTATCTGTCTCCTTGGCGCGCAGAGTCCATGTCCCGGCGTTGAACCACAT CGGGTTGTGGGTGCACCCTCTAACGGAGTGCGTGGAGTGGCTGACGCGTC AAGGGATGCGCTTCACTCCCGGAGGTATTAGAAAGGGGGCAGCAGGCCAC GATGTGGCATTTATACACCCGAAGGGTGACAAGAGTAACCCATTGTGCGG GGAAGGCGTGTTGATAGAGCTCGTTCAGGCGCCGCCTGATGTAATTGCAG ATGCCGATAAGCATTGATTCGTTCTTGTGAGGTCTGAGTTGGCGCGCGGC CCCAGTCCCAGTACAACAGCACCTCATGCCAGGTGTGCATGCCTATCATC CACGCTGAGCCCACGATTATTCGGCAGTAGAATACAAAGTTCTTGTGTAC AGGCAGCCGGCTGCACCGCCGCAACATGAAGATCTTTGGTTGAGCACATG TAGGATAGGTGTCTGAAAGGCAGATGGGGGGGGGTATGTGTGAGCGATGG GCAGCGCGAACACTAGAGATGATGTCACCCAAGCGGATATTTGATGAAGG CGTGCACTGCACTGCAGCAGATCCCGCTGAAACTTTAACAACCTGCATGC GTCTCCTCTGAGCCATACGTTGATTGAGTGTAAGCTTGTGCTGAAGACTT CGGTGCGGGGGTGAGCGGACCGTGCGTCGGAAGCCAGGAGAGCTGTTGAT GTTCTGTTATCGACCTTCAACTTGGAATCGGGAACCGCCCCCGTGCCGGT GGTTTTGCCTAAGCTTCAACGGTGCCTTCGAACACCCACGCACAAAACCA TTGTCCCGGAGCCAAATAGAGCCTGAGGAGCCAAGCGTATCGAAGCGGTC CCAATCGAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig64:881013..883521-

>mRNA_P-fluviatile_contig64.13110.1 ID=mRNA_P-fluviatile_contig64.13110.1|Name=mRNA_P-fluviatile_contig64.13110.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=684bp|location=Sequence derived from alignment at P-fluviatile_contig64:881013..883521- (Porterinema fluviatile SAG_2381)
ATGGTGTTTGTTCGGCCATCTGACCCCACGCGTAGGTCTTGGCACAGCTT
TGGACCGAAATACTGGGGATCCCAAAAATCGGTTCGTACAAGAGTGAGAT
GGTGTTTGTTCGGCCATCTGACCCCACGCGTAGGTCTTGGCACAGCTTTG
GACCGAAATACTGGGGATCCCAAAAATCGGTTCGTACAAGAGTGAGAGTC
CATGTCCCGGCGTTGAACCACATCGGGTTGTGGGTGCACCCTCTAACGGA
GTGCGTGGAGTGGCTGACGCGTCAAGGGATGCGCTTCACTCCCGGAGGTA
TTAGAAAGGGGGCAGCAGGCCACGATGTGGCATTTATACACCCGAAGGGT
GACAAGAGTAACCCATTGTGCGGGGAAGGCGTGTTGATAGAGCTCGTTCA
GGCGCCGCCTGATGTAATTGCAGATGCCGATAAGCATTGAAGTCCATGTC
CCGGCGTTGAACCACATCGGGTTGTGGGTGCACCCTCTAACGGAGTGCGT
GGAGTGGCTGACGCGTCAAGGGATGCGCTTCACTCCCGGAGGTATTAGAA
AGGGGGCAGCAGGCCACGATGTGGCATTTATACACCCGAAGGGTGACAAG
AGTAACCCATTGTGCGGGGAAGGCGTGTTGATAGAGCTCGTTCAGGCGCC
GCCTGATGTAATTGCAGATGCCGATAAGCATTGA
back to top