prot_P-fluviatile_contig64.13078.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig64.13078.1
Unique Nameprot_P-fluviatile_contig64.13078.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length197
Homology
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: D8LH74_ECTSI (Mitochondrial import inner membrane translocase subunit TIM17 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH74_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 4.460e-67
Identity = 133/205 (64.88%), Postives = 149/205 (72.68%), Query Frame = 0
Query:    1 MLFSKLGCNASVGWRRAAVPAAAVRH--------TPYMRSTRQRRVTAAAVASMSHLTTGRTASGVLENCMEGAINTLQSFVGGAIMXXXXXXXXXXSFGRAPDVGWLASVRQKAAEMSGSWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLIFAFPS-QEDELDVVDVPVDPPNKR 196
            +L   LGCNA  GW R +V AA   H        TP  R+ R++   AAAVAS SHLTTGRTASGV+EN                  XXXXXXXXXXSFGR PDVGWL SV+ KA EM G+WG LSAAF+GFTS+ST++RGRNDKWDQVLGACGAGAFL+R KGP+ MAQGAATYGLFSLIFAFPS Q+DELDVVD+PVD P  R
Sbjct:   12 LLSVALGCNALPGWSRNSVGAAVQPHHGLAWTSRTPTTRTLRRQFPVAAAVASTSHLTTGRTASGVMENXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFGRVPDVGWLKSVQTKAVEMGGNWGQLSAAFTGFTSISTVIRGRNDKWDQVLGACGAGAFLNRAKGPQGMAQGAATYGLFSLIFAFPSGQDDELDVVDIPVDAPKTR 216          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A835Z765_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z765_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.230e-21
Identity = 58/158 (36.71%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   41 AAVASMSHLTTGRTASGVLENCMEGAINTLQSFVGGAIMXXXXXXXXXXSFGRAPDVGW---LASVRQKAAEMSGSWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLIF----AFPSQEDELDVVDVPVD 191
            A + +++   +GR+ SG  E CME  + T+ S V G ++          +   A + G    + ++  K  +   SWG ++A FSGFTS + ++RGR D W+ +LG+CG GA + RD+G   M QG   YG FS I       PS  DELD VD+ VD
Sbjct:   81 APLTTIAKTASGRSESGFFECCMEVGLTTVGSLVSGGVLGYIIGWGIGIAQKGAFEGGLGNAIKAMHAKGRQTGSSWGLITACFSGFTSAARVMRGREDHWNSILGSCGTGAVMCRDRGVGGMLQGCLAYGAFSYILDMVGGHPSVTDELDFVDIAVD 238          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A836CM43_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM43_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.440e-13
Identity = 31/60 (51.67%), Postives = 47/60 (78.33%), Query Frame = 0
Query:  114 WGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLI 173
            WG ++A FSGFT+ + ++R R+D+W+Q+LG+CG GA + +DKGP+AM QG  +YG F+ I
Sbjct:  134 WGGITACFSGFTTAAKVIRSRDDRWNQILGSCGTGAAMCKDKGPQAMLQGCVSYGAFAYI 193          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A7S2P977_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P977_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.570e-12
Identity = 55/152 (36.18%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   58 VLENCMEGAINTLQSFVGGAIMXXXXXXXXXX----------SFGRAPDVGWLASVRQKAAEMSGSWGTLSAAFSGFTSVSTIVRGR-NDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLIF-------AFPSQEDELDVVDVPVD 191
            ++ N +E  I TL SF+ G ++                    SFG+      LA++  KA     +WGTLSAAFSGF +   + RG  +D W+ V+G+   GAFLSR+ GP+AM QGAATY  F+              ++ EL   DVP+D
Sbjct:  139 LVSNTIELTIVTLGSFISGGLLGYFGGGVMNVPSTLFGKSMGSFGQR-----LAALNAKAFVTCKTWGTLSAAFSGFNNFVRLCRGDVDDNWNTVIGSALTGAFLSRNSGPQAMLQGAATYAGFTYFLDKMTRSPETSQRQSELMYTDVPID 285          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A7S1T4X3_9RHOD (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4X3_9RHOD)

HSP 1 Score: 64.7 bits (156), Expect = 1.350e-9
Identity = 40/128 (31.25%), Postives = 69/128 (53.91%), Query Frame = 0
Query:   58 VLENCMEGAINTLQSFVGGAIMXXXXXXXXXXSFGRAPDVGWLASVRQKAAEMSGSWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLIFA---FPSQEDE 182
            V +  +E  ++T  SFV GA++             R     W A    +A+  + SWG +SA +SG  + +  +RG++D+++ + GACG+GA  +   GPRA  QG A++ LF  +F    +P+ ++E
Sbjct:   42 VADKVLEVLVSTTASFVNGALLGALMGLVSGAWQTRT----W-AGASAEASLSAKSWGGISAIYSGLQATARAIRGKDDRYNALAGACGSGAVFALGSGPRAALQGCASFALFGYVFDVMFYPNSKEE 164          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A1X6P919_PORUM (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P919_PORUM)

HSP 1 Score: 60.1 bits (144), Expect = 1.040e-7
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 0
Query:  113 SWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLS--RDKGPRAMAQGAATYGLFSLI 173
            SWG +SA +SG  + + + R +ND+W+ V+GACG+GA  S     GPRA  QG  ++ LFS +
Sbjct:  123 SWGGVSAVYSGLQTAAKVARAKNDRWNNVIGACGSGAAFSCASGGGPRAAVQGCVSFALFSYV 185          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: A0A5J4YNE8_PORPP (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNE8_PORPP)

HSP 1 Score: 58.5 bits (140), Expect = 3.410e-7
Identity = 27/73 (36.99%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  113 SWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLI---FAFPSQEDE 182
            SWG + A ++G  + +  +RG +D W+ VLGACG+G +LS  +G R+MAQG  ++  F+ +   + +P  + E
Sbjct:  114 SWGGIGALYAGIQTAAKNIRGVDDTWNTVLGACGSGVYLSWGQGGRSMAQGCVSFAAFTYVVEKYLYPRNQQE 186          
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Match: L1JQE8_GUITC (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQE8_GUITC)

HSP 1 Score: 53.1 bits (126), Expect = 2.130e-5
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  114 WGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAFLSRDKGPRAMAQGAATYGLFSLI 173
            WG++SAAF G   ++  +RG+ DKW+ ++GAC AG   +  KG  AMA G   + + S I
Sbjct:   75 WGSMSAAFCGVEVLAREIRGKTDKWNNMMGACSAGVVGNCGKGVGAMASGCVNFAVMSYI 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig64.13078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LH74_ECTSI4.460e-6764.88Mitochondrial import inner membrane translocase su... [more]
A0A835Z765_9STRA2.230e-2136.71Mitochondrial import inner membrane translocase su... [more]
A0A836CM43_9STRA1.440e-1351.67Mitochondrial import inner membrane translocase su... [more]
A0A7S2P977_9STRA4.570e-1236.18Mitochondrial import inner membrane translocase su... [more]
A0A7S1T4X3_9RHOD1.350e-931.25Mitochondrial import inner membrane translocase su... [more]
A0A1X6P919_PORUM1.040e-744.44Mitochondrial import inner membrane translocase su... [more]
A0A5J4YNE8_PORPP3.410e-736.99Mitochondrial import inner membrane translocase su... [more]
L1JQE8_GUITC2.130e-541.67Mitochondrial import inner membrane translocase su... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 70..171
e-value: 6.8E-12
score: 45.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig64contigP-fluviatile_contig64:553353..557744 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig64.13078.1mRNA_P-fluviatile_contig64.13078.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig64 553332..558446 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig64.13078.1 ID=prot_P-fluviatile_contig64.13078.1|Name=mRNA_P-fluviatile_contig64.13078.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=197bp
MLFSKLGCNASVGWRRAAVPAAAVRHTPYMRSTRQRRVTAAAVASMSHLT
TGRTASGVLENCMEGAINTLQSFVGGAIMGGLIGGFIGGSFGRAPDVGWL
ASVRQKAAEMSGSWGTLSAAFSGFTSVSTIVRGRNDKWDQVLGACGAGAF
LSRDKGPRAMAQGAATYGLFSLIFAFPSQEDELDVVDVPVDPPNKR*
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