prot_P-fluviatile_contig64.13029.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig64.13029.1
Unique Nameprot_P-fluviatile_contig64.13029.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length235
Homology
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A6H5JXQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ5_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 5.520e-96
Identity = 166/232 (71.55%), Postives = 180/232 (77.59%), Query Frame = 0
Query:    1 MRVTGNVMSEEDSMRPVALPVTATAQVPGSRLFAQANNKAELAEEEDSSLFFVQLPTKLPRPLPAYQRAETGC-----GKGGGXAHSSPKGKGKVKAELGDSVAGGSAVGDNGISNTAGESKAAAGMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRRADELNGGVDPQAEYGGGG 227
            MRVTGNVMSE+DSMRPVALPVTATAQ PGSRLFAQANN+AEL EEEDSSLFFVQLPTKLPRPL A+QR + G      GKG G A   P     VK E G+S AG               ++ A+ +P DD AFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSID++  +KTFCSFGQVTKRAVCTPDFEQLYRRADE++GG       GGGG
Sbjct:  208 MRVTGNVMSEDDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAAFQRGKDGASAPVRGKGKGKATGGPA----VKEEAGESGAGXXXXXXXXXXXKGAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAK--QKTFCSFGQVTKRAVCTPDFEQLYRRADEISGG-------GGGG 426          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: D8LHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB7_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.440e-65
Identity = 134/226 (59.29%), Postives = 153/226 (67.70%), Query Frame = 0
Query:   24 TAQVPGSRLFAQANNKAELAEEEDSSLFFVQLPTKLPRPLPAYQRAETGCG---KGGGXAHSSPKGKGKVKAELGDSVAGGSAVGDNGISNTAGESKAAAGMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRRADELNGGVDPQA------EYG-------GGGVKMEVS 233
            ++++PG R      N+AEL EEEDSSLFFVQLPTKLPRPL A QR + G     +G G       G   VK E G+S AG               ++ A+ +  DD AFD+GLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSID++  +KTFCSFGQVTKRAVCTPDFEQLYRRADE++GG           E G       GG VKMEV+
Sbjct:  300 SSKLPGMR------NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXATGGPAVKEEAGESGAGXXXXXXXXXXXXXXXAEKASEIAADDVAFDRGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAK--QKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGXXXXXXXDGFEGGXXXGGDVGGPVKMEVA 517          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A835ZEC9_9STRA (RNA polymerase III RPC4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.350e-28
Identity = 75/209 (35.89%), Postives = 108/209 (51.67%), Query Frame = 0
Query:    1 MRVTGNVMSEEDSMRPVALPVTATAQVPGSRLFAQANNKAELAEEEDSSLFFVQLPTKLPRPLPAYQRAETGCGKGGGXAHSSPKGKGKVKAELGDSVAGGSAVGDNGISNTAGESKAAAGMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRR 209
            M+V GN     D +RP+ +P +    V    LFA+ ++ A L  EED  +FFVQLPT LPR  P      +    GGG                  +V G  A G    ++T+GE+  +       P +D  L  M PG+IGKL + +SG  +L++ GV+L V  G+P  FVE+   ++  P +KT   FGQVT+R VC P+FE L+ +
Sbjct:  251 MKVLGNAFQPHDVLRPIVIPFSKNTAVRPEDLFARPHDAAALQAEEDEGIFFVQLPTALPRVFPESMEHPSQPTDGGGDG---------XXXXXHGAVGGTRAQGAKAAADTSGEADGS-------PGYDNSLTTMLPGRIGKLQIRRSGTVQLLLAGVALDVSAGMPCHFVEELTCVN--PKQKTMSMFGQVTRRLVCAPNFEDLHEQ 441          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A7S3UWU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWU6_HETAK)

HSP 1 Score: 92.4 bits (228), Expect = 1.660e-20
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:  121 GMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRRADE 212
            G   +DP  D GLRR+ PG++G++ VH SG+ +L +G     V PGLP  FV+  V++D+  G  T C FGQ++KR VCTPDFE+L+   ++
Sbjct:    1 GEEEEDPVADGGLRRVAPGRVGRVRVHASGRVKLTLGDTVFDVAPGLPCHFVQDVVAVDAEGG--TACFFGQLSKRVVCTPDFEKLFAEKEK 90          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A7S2XXH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH9_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.620e-19
Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 0
Query:  125 DDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRRAD 211
            +D   D+ LR++  G++GKL +H+SGK +L IGG++  V PGLP  F +  ++ID    +K  C FG+V+KR VCTPDFEQL+++ +
Sbjct:   28 EDVIHDKSLRQLPSGRLGKLRIHRSGKVKLWIGGMAFEVSPGLPCRFAQDVIAIDKE--QKKCCFFGEVSKRLVCTPDFEQLFQKRE 112          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: T1HGK6_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HGK6_RHOPR)

HSP 1 Score: 68.6 bits (166), Expect = 2.190e-11
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:  133 LRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKT--FCSFGQVTKRAVCTPDFEQL 206
            LR + PG+IGKL + +SGKARL++G V L V PG   +F +  +S++  P +KT    + G +T R V TPD+E L
Sbjct:   26 LRNLPPGRIGKLQILKSGKARLILGDVKLWVEPGTQTAFKQDLISVNLDPNQKTGNMINMGDLTTRMVITPDWESL 101          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: UPI001CF36C58 (DNA-directed RNA polymerase III subunit RPC4-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF36C58)

HSP 1 Score: 69.3 bits (168), Expect = 4.430e-10
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 0
Query:  121 GMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYRRADE 212
            G P     F   L+R   G IGKL + +SGKARL++G VSL V  G P  F++  VS+ +   R      G V  R +CTPDFE+L   + E
Sbjct:  307 GKPKQQKRFS--LKRASEGYIGKLQLLKSGKARLLLGEVSLDVTMGTPCGFLQDVVSVHTENNRSEMICLGHVKHRLICTPDFERLLTSSPE 396          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A4P6DFJ9_RHOPR (Putative dna-directed rna polymerase iii subunit rpc4 n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=A0A4P6DFJ9_RHOPR)

HSP 1 Score: 68.6 bits (166), Expect = 7.670e-10
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:  133 LRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKT--FCSFGQVTKRAVCTPDFEQL 206
            LR + PG+IGKL + +SGKARL++G V L V PG   +F +  +S++  P +KT    + G +T R V TPD+E L
Sbjct:  296 LRNLPPGRIGKLQILKSGKARLILGDVKLWVEPGTQTAFKQDLISVNLDPNQKTGNMINMGDLTTRMVITPDWESL 371          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: A0A6G0WW31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW31_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.580e-9
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0
Query:  117 KAAAGMPTDDPAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQLYR 208
            +A A   + D  FD+ L  M  G +GK+ +H+SGKA LV+G  +  + PG P +F E+ VSID++   +     G V+   V TPDFE L R
Sbjct:  241 EATATERSQDDLFDKSLHAMPGGFMGKINIHKSGKAVLVLGDKTFNIAPGHPPTFYEEAVSIDTK--EELLSMLGPVSHHLVVTPDFEALLR 330          
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Match: UPI0009E4B822 (DNA-directed RNA polymerase III subunit RPC4-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4B822)

HSP 1 Score: 66.6 bits (161), Expect = 3.770e-9
Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  133 LRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCTPDFEQL 206
            L+    G IGKL + +SGKARL++G VSL V  G P  F++  V++ +   R      G V  R +CTPDFEQL
Sbjct:  332 LKDASEGYIGKLQILRSGKARLLMGDVSLDVTMGTPCGFLQDVVAVHTEDSRSEMICLGHVNHRLICTPDFEQL 405          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig64.13029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXQ5_9PHAE5.520e-9671.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB7_ECTSI1.440e-6559.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZEC9_9STRA3.350e-2835.89RNA polymerase III RPC4-domain-containing protein ... [more]
A0A7S3UWU6_HETAK1.660e-2045.65Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XXH9_9STRA3.620e-1945.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
T1HGK6_RHOPR2.190e-1144.74Uncharacterized protein n=1 Tax=Rhodnius prolixus ... [more]
UPI001CF36C584.430e-1041.30DNA-directed RNA polymerase III subunit RPC4-like ... [more]
A0A4P6DFJ9_RHOPR7.670e-1044.74Putative dna-directed rna polymerase iii subunit r... [more]
A0A6G0WW31_9STRA1.580e-940.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI0009E4B8223.770e-944.59DNA-directed RNA polymerase III subunit RPC4-like ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007811DNA-directed RNA polymerase III subunit RPC4PFAMPF05132RNA_pol_Rpc4coord: 48..203
e-value: 6.6E-23
score: 81.8
IPR007811DNA-directed RNA polymerase III subunit RPC4PANTHERPTHR13408DNA-DIRECTED RNA POLYMERASE IIIcoord: 38..207
NoneNo IPR availablePANTHERPTHR13408:SF0DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC4coord: 38..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig64contigP-fluviatile_contig64:19954..24175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig64.13029.1mRNA_P-fluviatile_contig64.13029.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig64 19706..24764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig64.13029.1 ID=prot_P-fluviatile_contig64.13029.1|Name=mRNA_P-fluviatile_contig64.13029.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=235bp
MRVTGNVMSEEDSMRPVALPVTATAQVPGSRLFAQANNKAELAEEEDSSL
FFVQLPTKLPRPLPAYQRAETGCGKGGGGAHSSPKGKGKVKAELGDSVAG
GSAVGDNGISNTAGESKAAAGMPTDDPAFDQGLRRMRPGKIGKLYVHQSG
KARLVIGGVSLVVHPGLPVSFVEQGVSIDSRPGRKTFCSFGQVTKRAVCT
PDFEQLYRRADELNGGVDPQAEYGGGGVKMEVSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007811RPC4