mRNA_P-fluviatile_contig11.1293.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1293.1 vs. uniprot
Match: D7G539_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G539_ECTSI) HSP 1 Score: 170 bits (431), Expect = 5.190e-44 Identity = 107/245 (43.67%), Postives = 135/245 (55.10%), Query Frame = 1
Query: 3292 LMRGGLLWQESGFGRESIFITKRLAGGMAEACRSVVECLRRQLSIAVSVNPAEGPSSLSLLSEKNERTRDALMALGM---LCDDDDDVCKLYERAVQCCRLSGDWLGVANACAASARLHMSTGWFGEAVSGLQLALKIAYELKNDVTAASVHSFLGWAIASQGDARNALSHFRRWRTLACRSGDGFSAAASELCVAHMYMRLGRYQSGP--ESGCSPTAHQDIPDRLLEKTSHADLAEAKRHYFR 4011
+M+G LLW+ESG GR + + + GM E CR V E LRRQL+IA++ E SS K RDALM LG LC DD LYERAVQCCR SGDW+G+A+A AA A L + G F EAV G +L LK+A EL++D AAS HS LGWA+AS+ C+AHM++RL SG ++ C T D P+ LE +SHA+L A+RHY R
Sbjct: 1 MMKGSLLWRESGVGRVTELTAEGVLHGMGETCRPVTEYLRRQLAIAMACESTE-ESSPPKSPRKQVIARDALMGLGTMATLCGDDRGARDLYERAVQCCRASGDWIGLAHALAAKAHLQAAAGRFEEAVGGFKLVLKLACELRDDALAASAHSCLGWAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIAHMHVRLAIVLSGDGDQAVCHDTPQTD-PNPALELSSHAELVGARRHYSR 243
BLAST of mRNA_P-fluviatile_contig11.1293.1 vs. uniprot
Match: D7G540_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G540_ECTSI) HSP 1 Score: 111 bits (278), Expect = 2.270e-22 Identity = 76/145 (52.41%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 640 ESKWGGQAGAREAAKKARAHQIHISNTVVQILGKICPDKNVPPTT-THQPGTAGNLVKTDDKYIDGVDEDEADTSSSSDVSTAASSVT-------PAPTSTPDDHITLACTHPSQHLLEEGKELVQMKRPEQAVVVLGQAVEMLR 1050
++ W GQ ARE AKKA+A Q+ ISNTVV+ILG+I PD NVP T +P T+G + D +DG EDE + +SSS PAPT TPDD TLA HPSQ LL+ GKEL++ KRPEQAVVV GQA E+LR
Sbjct: 190 QADWKGQVTAREVAKKAKAQQLRISNTVVRILGQIHPD-NVPSRPPTQRPDTSGASAE-DRVEVDGTKEDENEVASSSSXXXXXXXXXXXXXXXXPAPTVTPDDFTTLASDHPSQQLLKAGKELMRQKRPEQAVVVWGQAAEILR 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1293.1 >prot_P-fluviatile_contig11.1293.1 ID=prot_P-fluviatile_contig11.1293.1|Name=mRNA_P-fluviatile_contig11.1293.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1397bp DGTPGGSGGGSGGRHRKHFPSVILLQPGRCLIDLWCGQIVARIREDEASSback to top mRNA from alignment at P-fluviatile_contig11:3413635..3424519- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1293.1 ID=mRNA_P-fluviatile_contig11.1293.1|Name=mRNA_P-fluviatile_contig11.1293.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10885bp|location=Sequence derived from alignment at P-fluviatile_contig11:3413635..3424519- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3413635..3424519- >mRNA_P-fluviatile_contig11.1293.1 ID=mRNA_P-fluviatile_contig11.1293.1|Name=mRNA_P-fluviatile_contig11.1293.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8382bp|location=Sequence derived from alignment at P-fluviatile_contig11:3413635..3424519- (Porterinema fluviatile SAG_2381)back to top |