mRNA_P-fluviatile_contig11.1290.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 1.450e-134 Identity = 241/349 (69.05%), Postives = 272/349 (77.94%), Query Frame = 2
Query: 260 APVGSRKGASLLASNASLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPAPSPVNALKLLLLVYGGWFASLVSTAAVVTALSPEA----TDPPAVPAAAAPSPSFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLPPALRLPTLSRNITS 1294
A S G SLLA+ S AIV+A+F +R+AF+RAG+ FP SLAGMV LFAGLVVL+RAAP+ AE++V LEPGAA+LARWLPVFFAPSLVVLPLSP PS VNALKLLLLV GGWF SL STAAVV ALSP A TD A P AP F G V GLG GAVV+GVLAVAG SGQA PG +L KLSKPAAQLS+LL TLFGF+AGTR+PRR ++AVHPVV C+AV M AA IG+GVG+GFA +LRSY+T+SRCPVHLGAGD+LLG LGPSV+SFAVQMYRRR LI + K+VA G++FCASSGLFGTALVSRLLGLP LRL LSRNITS
Sbjct: 87 ATASSSSGPSLLATGTSFTAIVVADFVLRRAFVRAGIAFPPSLAGMVVLFAGLVVLERAAPKSAEDIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGALSPPADASTTDSAAPPKTLAPV--FRGPFVRGLGAGAVVSGVLAVAGGSGQA--------------PGALLTKLSKPAAQLSLLLATLFGFSAGTRMPRRVSKAVHPVVMCSAVAMGTAAAIGKGVGLGFADMLRSYLTRSRCPVHLGAGDVLLGLLGPSVLSFAVQMYRRRNLIFEDAKQVAAGSVFCASSGLFGTALVSRLLGLPTTLRLAALSRNITS 419
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A7S3VAA5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAA5_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.880e-46 Identity = 142/360 (39.44%), Postives = 181/360 (50.28%), Query Frame = 2
Query: 260 APVGSRKGASLLASNASLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPA-PSPVNALKLLLLVYGGWFASLVSTAAVVTAL---------SPEATDPPAVPAA----AAPSPSFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLP-PALRLPTLSRNITS 1294
AP ++KG SL+AS +S A+V + R+ + FPSSLAG LF LV L L + + LL PGAAVLA+WLPVFF PSLV LPL+ + S + K+ +V G+F +L STA V + S +A P V + + P P F +VA A A+ A + L P L+ML TL FT G RLP+ F + VHP+VTCT +T A G F +L SY S CPVHLGAGDLLL LGP+VV+ A QMY R+ L+ N V + GLFGTA ++RL + P LRL LSRNITS
Sbjct: 84 APESAKKGPSLIASISSTVALVALDIGFRRLLKSLSISFPSSLAGCGTLFTLLVTLCTVNESLGDGLYNLLSPGAAVLAKWLPVFFVPSLVTLPLAQSLGSSLEVFKVGAVVVAGFFFTLFSTAFSVIGIRKILGTASSSADAQSLPVVQSTNVEESTPPPKPFSDAT----FNRLVACATTSAIATIVA-------------IKSSASIHLITPMTALTMLCTTLASFTFGARLPKSFTKTVHPLVTCTTLTWTAMKVFALSTGQSFRSMLTSYKVGSTCPVHLGAGDLLLFMLGPAVVALACQMYDRKKLMKENIAEVGTAVGVSSIGGLFGTAAMARLFNVGNPMLRLCLLSRNITS 426
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A4D9CWJ8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWJ8_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.210e-42 Identity = 128/344 (37.21%), Postives = 183/344 (53.20%), Query Frame = 2
Query: 293 LASNASLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPAP-SPVNALKLLLLVYGGWFASLVSTAAVVTAL---------SPEATDPPAVPAAAAPSPSFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLPPALRLPTLSRNITS 1294
L + SLAA + + A+R+ FL GL FPSSLAGM+GLFA L+ + R+L+PG +L RWL VFF P+LV+LPLS +P AL+L ++ G+ ASL +TA + L SP + F S+ L V+G +V ++ A G L L A L L T+ + G+RLP + +AVHP+++C +T+A + + +G L +YV+++ CP+HLG GDLLLG LGPS+++ AVQMY RRAL+ N ++ G + + GLF +A +SR LGLPP L TLSR IT+
Sbjct: 542 LQTGLSLAAFIALDAALRRLFLARGLAFPSSLAGMLGLFALLLATGAGTTAARPLLYRVLKPGTDLLTRWLAVFFVPTLVLLPLSAGSLAPSLALRLGAVLVLGFEASLWTTAELADLLTSKNDVAVSSPXXXXXXXXXXFSTTKTPFSHSLHKALAISTAVSGAASVLLSARLAAS-------------GSSL--LPSLARTLFTFLATILSYVTGSRLPLKLRKAVHPLLSCAGLTLALLSLHARLLGQSLTHQLHAYVSRAPCPLHLGGGDLLLGLLGPSILAMAVQMYERRALLKQNLSKILGTCLGASVFGLFSSAALSRALGLPPTLGKATLSRCITT 870
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A7S1FQA4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQA4_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.020e-41 Identity = 130/348 (37.36%), Postives = 173/348 (49.71%), Query Frame = 2
Query: 314 AAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPE------------------LAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLS-PAPSPVNALKLLLLVYGGWFASLVSTAAVVTALSPEATDPPAVPAAAAPSPSFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLP--PALRLPTLSRNITS 1294
AA+ + +R+ F G+ FPSSLAG L L+ D +P+ V RLL+PGA +LARWLP+FF PSLV LPL+ P + A K+ ++V GG+ SL++T+ V A+ P+ A PS F A + G+L A G A L G V L PA + +L TL F G RLP + +A+HP+V CT ++ A +G+ G F L Y T S G GDLLL LGP+V+S A+QMY RR L+ N + VA G A+ GLFGTA + RLL + P +RL LSRNITS
Sbjct: 83 AALTAFDVLLRRTFRSLGIAFPSSLAGCGFLLFALLAGDLFSPDPGYEMVGGKPVPIGERGRWGNKVYRLLDPGAVLLARWLPIFFVPSLVTLPLAEPLGGALEAAKVGIVVAGGFLFSLLTTSWCVAAVRPKGQK-------TASPPSKSAGXXXXXPFSAGLLGLLVRLTALGGAADL----------LAGVVNAGLRAPARYVYLLCGTLASFVYGARLPPKITKALHPLVVCTLLSWTGVAALGKLTGSSFRATLAGYRTGSWTT---GPGDLLLFLLGPAVISLALQMYGRRELVRQNAREVAAGVTGSAAGGLFGTAFLVRLLRMTGAPGVRLALLSRNITS 410
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: B7FZ18_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZ18_PHATC) HSP 1 Score: 159 bits (402), Expect = 1.080e-37 Identity = 135/357 (37.82%), Postives = 178/357 (49.86%), Query Frame = 2
Query: 308 SLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPA-PSPVNALKLLLLVYGGWFASLVSTAAVVTAL------------SPE-------ATDPPAVPAAAAPSPSFH------GSIVWGLG-FGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLP-PALRLPTLSRNITS 1294
S AA + + A R+ FL+A + FPSSL G L A L+ L R + A L+PGA VLA+WLPVFF PSLV LPL+ + S K+ ++ GG+ +LV+T+A V A+ SPE A A+ P P+ ++++GL F + A L + GAS + + P L ML TL F G RLP+ + +HP+VTCT++T AAAA + G FA +L+SY T S + GAGD LL LGP+VVS AV MY RR L+ N V GLFGTA R L + PA+RL LSRNITS
Sbjct: 88 SAAAFCVLDVAFRRGFLKANVAFPSSLGGCGILLALLLALPR---KTAGKAFSALKPGADVLAKWLPVFFVPSLVTLPLADSLGSSAELAKVAAVIVGGFLFTLVTTSASVVAVRSLLSGDTNRDESPEEALPKIDAVSQEAIADGRDPFPTIKPFDDSTATMLYGLTVFSGLAAAKLTLDGAS----------------------YATTTPLTALFMLSSTLASFVWGARLPKALTKVLHPLVTCTSLTWAAAAAFARVTGRSFASMLQSYRTGSLGKMA-GAGDWLLFLLGPAVVSLAVSMYDRRKLMRENIPEVGTSIGVSTFGGLFGTAWAVRFLSIGNPAVRLSLLSRNITS 418
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A6S9FDZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FDZ5_HETAK) HSP 1 Score: 157 bits (397), Expect = 2.360e-37 Identity = 118/332 (35.54%), Postives = 169/332 (50.90%), Query Frame = 2
Query: 299 SNASLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPAPSPVNALKLLLLVYGGWFASLVSTAAVVTALSPEATDPPAVPAAAAPSPSFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIG-FAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLPPALRLPTLSRNIT 1291
++ S A + ++++RK F R + FPSSL GM +F GL+ L+R + A VV L PG L +WLP FF P +V++PLSP S +LLLL GG + A+ V L +A A P+A A +P+ G + + + G AVA A + S A ++ML T+ GF A LP P + + V +AA A + IG F ++R Y T+ + + +GAGD+LLG LGPS++SF + MY RRALI N V G +F A+ L GTA+++R LGL LR T+ RN+T
Sbjct: 63 TSTSFGAFLFMDWSLRKVFKRLEINFPSSLCGMFVMFFGLLGLERVDAQTAAKVVAFLGPGFDQLTKWLPTFFVPGVVMMPLSPPLSGGTVGRLLLLNAGGLVINFF-VASRVAGLLIKANGGAAAPSAPAAAPAAGGKHPYPMELAHKLFGAAAVAAAVAVSTG--------------------SPQAYAVTMLAATVGGFVAANHLPANVKTICSPFIVSSLVGLAACAALAPVSRIGGFKDLVRDY-TRKQGGLGMGAGDVLLGLLGPSILSFGLSMYHRRALIAQNLAVVVGTNLFSAAFSLLGTAVLARALGLAAGLRTSTVMRNVT 372
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: B8CB30_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB30_THAPS) HSP 1 Score: 156 bits (394), Expect = 1.200e-36 Identity = 119/342 (34.80%), Postives = 176/342 (51.46%), Query Frame = 2
Query: 320 IVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAA--PELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPL-SPAPSPVNALKLLLLVYGGWFASLVSTAAVVTAL-----SPEATDP-PAVPAAAAPSP-------SFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLP-PALRLPTLSRNITS 1294
+++ + R F + + FPSSLAG LFA ++V+D + ++ V +LL PGA +LA+WLPVFF PSL+ LPL S + LK+L +V GG+F +L +T+ V + AT+P P P A+ P +F ++ L A + G+ +V + + +KP +L +TL F G LP+RF + VHP+VTC +T A+ T G F +L+SY + P+ GAGD+LL LGP+VV+ + QMY R+ L+ N V + + GL+GTA RLL + P +RL LSRNITS
Sbjct: 98 LILLDTQFRSLFTKYSIPFPSSLAGCGTLFATMLVMDSLSGKSKMGNEVYQLLNPGAMLLAKWLPVFFVPSLITLPLASGLGNAWEVLKVLSVVIGGFFFTLFTTSWSVLGIRKLMGGDTATEPVPIYPVDASNVPVTNKQPQAFSLTLFRTLKAFAWLTGISSVT------------------LINKSPASQWNKPLQSAFLLSITLSSFVFGANLPKRFTKTVHPLVTCAGLTWLASKTFAMLTGSTFLAILQSYKAGTLAPLSAGAGDVLLFLLGPAVVALSCQMYGRKKLMRENIPEVGISTLVSSLGGLYGTAAAVRLLNIVNPMIRLSLLSRNITS 421
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A7S2PQH5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PQH5_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.820e-36 Identity = 117/349 (33.52%), Postives = 174/349 (49.86%), Query Frame = 2
Query: 314 AAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPA-PSPVNALKLLLLVYGGWFASLVSTAAVVTAL----------------SPEATDPPAVPAAAAPSP-SFHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSY---VTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLP-PALRLPTLSRNITS 1294
A ++ + R F + + FPSSLAG LFA ++ + E E + L PGA +LA+WLPVFF PSL+ LPL+ + + + LKL ++ GG+F +L +TA V + + EA P V A P P +F +++ L A ++G+ AV A +L P +L TL F G LP+ F + VHP++TC+++T A+ + G F +++ Y ++ P+ GAGD+LL LGP+VV+ A QMY R+ L+ N K V I + GL+GTA RLLG+ ++RL LSRNITS
Sbjct: 92 ALLIFLDVQFRSLFTKYSIPFPSSLAGCGSLFATMIAVTSMKEEWGEAIYNTLNPGAGLLAKWLPVFFVPSLITLPLAGSLGNSLEILKLFTVIIGGFFFTLFTTAWSVLGIRRLMGGXXXXXXXXVSATEAVAP--VKATTNPPPKAFSTTLLKNLATLAGISGIAAVGAIKQSAT-------------------QLITPLQSSFLLFSTLASFVFGANLPKSFTKTVHPLITCSSLTWVASTLMASLTGRTFIDIIKLYKAGISPLAAPLSTGAGDVLLFLLGPAVVALACQMYGRKKLMRENIKEVGISTIVSSLGGLYGTAAAVRLLGMGNTSIRLSLLSRNITS 419
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A3L6TN40_PANMI (Plastidal glycolate/glycerate translocator 1, chloroplastic n=2 Tax=Panicum TaxID=4539 RepID=A0A3L6TN40_PANMI) HSP 1 Score: 154 bits (390), Expect = 4.740e-36 Identity = 111/330 (33.64%), Postives = 165/330 (50.00%), Query Frame = 2
Query: 308 SLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPAPSPV-NALKLLLLVYGGWFASLVSTAAVVTALSPEATDPPAVPAAAAPSPS-FHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLPPALRLPTLSRNIT 1291
SL +V A+ +++AF+ A + FPS+L GM +F+ LVVLD P LA+ + EP + RWLP+F+ PSLVVLPL+ P + LK+ + +GGWFASL A+ + +PA PS F +W +GA+ VA + A G + S P +L T+ GF G+ LP + +HP+++C AA G G G VL Y TK P + GAGD+L+GFLG ++SFA M++ R L+ + + ++ L+ TA++ RL+GL P+L + L R IT
Sbjct: 128 SLGIVVAADKFLKQAFVAASIKFPSALFGMFCVFSVLVVLDAFVPALAKGFMDFFEPATLFIQRWLPLFYVPSLVVLPLAVRDVPAASGLKIFAITFGGWFASLAVAGYTALAVR-KLVKTQLIPAEPMSKPSPFSTFEIWA--WGAIFVASFGVAYFNPTAL---------------GTTARTSLPF----LLAATVLGFMVGSGLPAGVKKVLHPIISCALSADLAAVAYGYLSGSGLDAVLGDYFTK--VPSNPGAGDVLMGFLGSVIISFAFSMFKARKLVKRHAAEIFTSIALASTFSLYSTAILGRLIGLEPSLTIAILPRCIT 433
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Match: A0A0D9XMX7_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9XMX7_9ORYZ) HSP 1 Score: 152 bits (383), Expect = 1.060e-35 Identity = 114/331 (34.44%), Postives = 167/331 (50.45%), Query Frame = 2
Query: 308 SLAAIVIAEFAIRKAFLRAGLVFPSSLAGMVGLFAGLVVLDRAAPELAENVVRLLEPGAAVLARWLPVFFAPSLVVLPLSPAP-SPVNALKLLLLVYGGWFASLVSTAAVVTALSPEAT-DPPAVPAAAAPSPS-FHGSIVWGLGFGAVVAGVLAVAGASGQAXXXXXXXXXXXXXLPGGVLFKLSKPAAQLSMLLVTLFGFTAGTRLPRRFARAVHPVVTCTAVTMAAAATIGQGVGIGFAGVLRSYVTKSRCPVHLGAGDLLLGFLGPSVVSFAVQMYRRRALICMNGKRVAGGAIFCASSGLFGTALVSRLLGLPPALRLPTLSRNIT 1291
SL +V + + KAF A + FPS+L GM +FA L++LD AP LA + +P + RWLP+FF PSLV+LPLS SP +A+K+ + +GGWFASL A TAL+ T +P PS F +W +GA+ A+A S A G P +L T+FG+ G+RLP + +HP++ C AA G G VL Y+TK+ P + GAGD+L+GFLG ++SFA M+++R L+ + + ++ L+ TA++ R++GL P L + L R IT
Sbjct: 41 SLGMVVGLDKLLEKAFAAASIKFPSALFGMFCVFAVLLLLDAFAPALARGFIAFFDPATLFIHRWLPLFFVPSLVILPLSVRDVSPASAIKIFSITFGGWFASLA--VAGYTALTVRRTVKTQLLPPEPMNKPSPFAALELWA--WGALFLASFALAYVSPTAL---------------GTTATTCLPF----LLASTVFGYMLGSRLPSAARKVLHPIICCALSADLAAVAYGYLSRSGLDAVLGDYLTKA--PSNPGAGDILMGFLGSVIISFAFSMFKQRKLVRRHAAEIFTSIAIASTFSLYSTAILGRVIGLEPTLTISILPRCIT 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1290.1 >prot_P-fluviatile_contig11.1290.1 ID=prot_P-fluviatile_contig11.1290.1|Name=mRNA_P-fluviatile_contig11.1290.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=423bp MARHTLFARPGSRSSQVGLLSAAEETADTGETADMGALAAAPAAAIATPTback to top mRNA from alignment at P-fluviatile_contig11:3388852..3395861+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1290.1 ID=mRNA_P-fluviatile_contig11.1290.1|Name=mRNA_P-fluviatile_contig11.1290.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7010bp|location=Sequence derived from alignment at P-fluviatile_contig11:3388852..3395861+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:3388852..3395861+ >mRNA_P-fluviatile_contig11.1290.1 ID=mRNA_P-fluviatile_contig11.1290.1|Name=mRNA_P-fluviatile_contig11.1290.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2538bp|location=Sequence derived from alignment at P-fluviatile_contig11:3388852..3395861+ (Porterinema fluviatile SAG_2381)back to top |