mRNA_P-fluviatile_contig11.1289.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1289.1
Unique NamemRNA_P-fluviatile_contig11.1289.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: D8LU32_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU32_ECTSI)

HSP 1 Score: 1016 bits (2628), Expect = 0.000e+0
Identity = 644/1219 (52.83%), Postives = 745/1219 (61.12%), Query Frame = 2
Query:  257 AMSLQCAECKGSIVDRRTAGEKLSFCKDGTSLHLVMGATNEDREGIGFKVAGVPVDKLPNEKNPYRSVAYVRCANTRPDKGGRECNKKVGGVKCYPPLSDNRLIFFQHKALLVDDQPARSWKMVRDSSLRDLRLLPAAKEDQARRFKPRQWPPLVKSVAAPP-PPSTAGPSMTAASPLMLGAPQMTKGTLPNAAQLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGVV---EMLVGSSLQGYGDGAGGVDHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRLEAELAAPVLNLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVARLAPVASEVRVQAKRLLGGMGDRVGDAASAATA--ALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGG------------DPELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEAALPSVVQAQAVVGLSGMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEAIGHLSAGRGSES---LAAAGMASGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDRSSIKAEDKAVPNGASPRRKVTPGSAGSGKDILVNIFSGGXXXXXXXXXXXXXXXISASPTSDEGKDFSETSSIAAPSTFSGGFGSAPDGGDAERESRPRLPPTLPPCDGSPPVKDPPAAGTGSAAATSPSXXXXXXXXXXXXXXXXXXXXXXXXDHTVGAVAREETGDGQAGAXXXXXXXXXXXXXXXXXXXTGFTVAAAATGDEDRKGWNKILPTILSPAARRYAAMYLATCVRQALTKNPNQMARSTLNSAAQLAHTIKPAFDYHERKVAGPSNAVPFVFEARCVVSSHLEELSGLILVKRATGTTIKAARENAAVKVRNYLLA 3850
            AMSLQC+ECKG+I D R AGE LSFC DGTS+HLVMGA+ E REGIGF +  VP +K PNE NPYRSVAYV CAN RPD  G++CNKKVGGVKCYPPLSDN+LIFFQ KALLVD Q  +SWK VR+SSLR ++LLPA KE++ R+F PRQWP L KS+A     P   G  M                       LTR+ PRGYQEELF AVM CERNSLVYLPTGLGK L+A+MVL++MLD NP RQA+FLVETTALAMQQ T+LQNE+ G V   EMLVGSSLQ +G   G +DHG+ KL+ VR+A+IVVATAGAFEHCMCK Y+DPD+ICCVVLDEAHHCGK+HPFNRVARSFLT++AF SV      RA E PKLVALTASPAGE +++DT V++ QLLDRLEA+LAAPV +LQEV  LTP V+LEL+NVTAT  E  LLGCLEKLVLSR+  LAP ASE   QA+ LL  +G R+  AA+AATA  A GADVPR DD W FPNKFFTALCQRAL+A  GG     GW     WE+D     G   + G            S L+ LMN++FAVDEIGG A W+  LE L+ G T G            DPEL+E + V+KE+L    A   +S S GG+                    GSKLA+I  LLEEHKR CD SGKRFSALVFVSRR+LA A  AMLE A P  V+AQ++VGLS MTLNQQR AL SF++G KN+LVSTSVCGEGIDVP CALVVCASLP+SGT+LVQLRGRIRSKE  CRFVGLTRT+GAAD+AH+KSICLRE+NMLEAI  LS G  S S    A AG  SG                                              D ++  A      + A   R   PG       + V   SG                 S S T    +  +  +S  APS                       P  + P D  PP K+            +P+                        D      A+ + G G                        G     AAT   D   W   LP  LSPAARRYAA YLATCVRQAL +NP+QMAR TLNSAAQLA TIKP F+Y ERK+ G      F FEARC+V+S LEEL+GLILVK A G++IKAARE AAVKV  Y+ A
Sbjct:   52 AMSLQCSECKGNICDNR-AGENLSFCVDGTSVHLVMGASKEGREGIGFGIKEVPANKQPNENNPYRSVAYVLCANRRPD-NGQQCNKKVGGVKCYPPLSDNQLIFFQQKALLVDHQHPKSWKNVRESSLRKVKLLPAGKEEEERQFTPRQWPTLRKSLAGGSNDPGHGGGGM----------------------DLTRSTPRGYQEELFDAVMECERNSLVYLPTGLGKTLVAAMVLKQMLDWNPERQAYFLVETTALAMQQTTRLQNELGGTVKKIEMLVGSSLQAFGGKRGKIDHGLVKLECVRDANIVVATAGAFEHCMCKRYIDPDAICCVVLDEAHHCGKEHPFNRVARSFLTMKAFPSVQATPD-RAKEFPKLVALTASPAGELSVHDTTVRINQLLDRLEADLAAPVQHLQEVKSLTPSVDLELLNVTATASETTLLGCLEKLVLSRLVGLAPEASEAHAQAQSLLDSLGGRMRGAAAAATASTAAGADVPRKDDAWVFPNKFFTALCQRALSA--GGAEQREGW-----WESD-----GTVMDEGSXXXXXXXXXEASQLHSLMNLSFAVDEIGGEAIWQRALEELDNGWTSGSSSSSGEGNDFSDPELEETIGVLKENLS---AVATVSGSDGGSAAASGGDAVRRA-------GGSKLAKIAWLLEEHKRACDASGKRFSALVFVSRRELALATPAMLEEAKP-FVKAQSIVGLSEMTLNQQRRALASFQNGLKNVLVSTSVCGEGIDVPACALVVCASLPSSGTELVQLRGRIRSKENECRFVGLTRTAGAADKAHVKSICLREQNMLEAIRSLSGGGSSGSDVFRAKAGRGSGIVL-------------------------------------------DGAAAAATXXXXXSLAGAPRTGVPGVC---PPVNVPTSSGSAA--------------SPSQTVTRAQARAAQTSPGAPS-----------------------PTAVAPSDPHPPGKE-----------LAPA------------------------DEVTAPTAKGKEGRG------------------------GGVAPEAATAQPDDNPWKVSLPVTLSPAARRYAATYLATCVRQALQRNPDQMARCTLNSAAQLAQTIKPVFEYDERKLKGSGVNTCF-FEARCIVTSRLEELAGLILVKEAKGSSIKAAREGAAVKV--YMCA 1077          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: A0A0H5R4I3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4I3_9EUKA)

HSP 1 Score: 219 bits (558), Expect = 6.440e-56
Identity = 194/619 (31.34%), Postives = 278/619 (44.91%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGV-VEMLVGSSLQGYGDGAGGVDHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRLEAELAAPV-LNLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVAR----LAPVASEVRVQAKRLLGGMGDRVGDAASAATAALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHP--SMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGGDPELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEAALPSVVQAQAVVGLSGMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEAI 2668
            QLT+++P  YQ +++   M    NSL++LPTG GK L+++M +RRML LNP   A F+VET ALA+QQ T L NE+  + + +LVGS L    +    ++H    +  +R ADI+VATAG++ + + +  +D   IC +V+DEAHHC K+H FN +                     +  PK++ALTASPAGE  L  T  K+E+LL RL A   AP    L  + + +PR  L  V V     E  LL  + K  L    R    L P+ S                                        FP+  F A+ Q                                          ++  D P    L  + N    ++E+G + +W+   E ++     G  E   A  VV +   Q                                  GS + +I  L+ +H    D   K FSAL+FVS R LA  +  +   +    ++A+A+VG+S MTL QQ+  L  FRD   N++VSTSVCGEG+D+P C LV+C  LP S    VQ+RGRIRS E   R++ + R        H++ + LRE NM EAI
Sbjct:  154 QLTKSSPYDYQVDMYQRAMAMPDNSLIFLPTGFGKTLISAMFIRRMLQLNPLFSALFIVETNALAIQQYTVLINELGDLSIRILVGSMLPSKPN----INH----IAELRSADIIVATAGSYLNAVEQNLLDFGRICALVMDEAHHCAKNHLFNSLLHKLY---------------GAHRPKIMALTASPAGELDLLQTSEKLEKLLKRLIARPIAPSKATLAALRKKSPRTPLLQVVVKQNRHEHELLERIRKYFLDIAERYFNQLLPLQSVT--------------------------------------FPSAPFFAMTQL-----------------------------------------LRPEDEPLSEHLVEVYNACSELNELGLKWSWDKVGETIKSKNCFGAKEFISA--VVPDSNFQ----------------------------------GSVVNKIEELVTQHY---DADPKGFSALIFVSTRGLA--IELVKHISRIPFIKAEAMVGISEMTLAQQKTVLSKFRDQVINVVVSTSVCGEGVDIPACCLVICTCLPNSMISFVQIRGRIRSNESA-RYLSMVRERR---DMHVEGLVLREDNMNEAI 625          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: A0A1S3HGS0_LINUN (uncharacterized protein LOC106154762 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HGS0_LINUN)

HSP 1 Score: 127 bits (320), Expect = 6.180e-26
Identity = 169/630 (26.83%), Postives = 264/630 (41.90%), Query Frame = 2
Query:  839 LTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGVVEMLVGSSLQ-----------GYGDGAGGVDHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRL-EAELAAPVLN---LQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVARLAPVASEVRVQAKRLLGGMGDRVGDAASAATAALGADVPRVDD--MWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGGDPELDE-ALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEAALPSVVQAQAVVGLS---GMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEA 2665
            +T T PR YQ +L+ A M  + + +V+LPTG GK ++++MV+  ML LNP R   FLV+   L MQQ+  L+ E+   +   +   +Q           G     GG        + + + DIVV TA  + + + K+ V    +C  V DEAHHC K HPFNR+   F             + +    PK++ LTASPAG  T+ DT   +++LL+ + + +LAA + N    +E+ +   + +L    +  T+ E  L   L+K +     RL+         ++  +    D  GD   A    L    P   D  ++    K   ++   AL+A             VGD   +      F+     D  N   R HP    +   +  A  ++      +S  E     +T  + E D+ A++ V   +LQ      I       GK+               +   ++      +EE K EC         +  V                           G S   GMT+ +Q  ALE  R+    ++V+TSV  EG+D P C LV+  + P+S T LVQ RGR R K+   RF+ L R  G  D+  L  +  +E+NM +A
Sbjct:  441 MTTTLPRSYQIDLYEAAM--KGDVVVFLPTGTGKTVISAMVVSHMLQLNPARPVVFLVDRVLLVMQQSKVLKTELGDKMYTRIDDGVQHDRQLKIGTLCGEKQDTGG--------ELIWKQDIVVTTAAYYLNLLEKQVVCWQDLCLAVFDEAHHCVKSHPFNRLLEQFHR-----------KLQLKHRPKILGLTASPAGRETVEDTEKMLKRLLENIGDGKLAAIMENDRSFKELSKYKTQTKLIAKELGLTVNEKELQDELQKYLFLCYNRLSVETDFGNFDSREEVKTCQDLKGDVLEAFQIFLQDAKPIEPDRNIYIEALKLHCSVLCEALSA-------------VGDGSVE------FAFRVLQDLLN---RSHPGSFEKAAELNLAHQKV------KSLTEHFAL-RTEEEKEDDKMAVKTVAREILQ-----GIDWDSREQGKQPFVLVLVKTR-----VVAQQMTEALKEMEELK-ECG-----ICPVCIVGHGG-----------------------GSSDGGGMTIKKQSRALEGIRNYEYQVVVATSVAEEGVDFPECELVIHMNPPSSVTALVQTRGRAR-KQGVSRFIALCREPGQKDKIEL--LQKKEENMYKA 978          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: A0A8B8E0I7_CRAVI (uncharacterized protein LOC111130213 n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8E0I7_CRAVI)

HSP 1 Score: 127 bits (318), Expect = 1.480e-25
Identity = 167/648 (25.77%), Postives = 264/648 (40.74%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQAT--------------QLQNEVRGVVEMLVGSSLQGYGDGAGGVDHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVA-RSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRLE-AELAAPVLNLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVARLAPVASEVRVQAKR----LLGGMGDRVGDAASAATAALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGGDPELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEAALPSVVQAQAVVGL----------SGMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEAIGHLSAGR 2689
            +LT   PR YQ EL+   M  E + +++LPTG GK L++ M +  ML+LNP RQA FLV+   L +QQ+                L N    V   L  ++L G      GV         + + D++V TA   E  + +  +  + +C VV DEAHHC K HPFN++  ++ LTI               E PK++ LTASPAG++T   TV  ++ L+  +  A++     N  E+ R     +L +      + E  +    +K +L    RL+   SE  +  K     +     D  GD  +     L +D   +D          ++L ++                                     +H N+    H S +   +N  F   E G     +   E++++     DP L+      K  LL  D    +S       KE                +       TLL  ++    D + ++  +LV V  R  A  ++ +L+     +     V  L           GM + QQR  L + ++    I+++TSV  EGID+P C LV+  +LP+S T LVQ+RGR R +    +FV         D+  L  +  RE NM++A   L  G+
Sbjct:  824 KLTAWEPRSYQWELYRRAM--EGDRVIFLPTGTGKTLISCMAVSSMLELNPTRQALFLVDKVLLVIQQSRYLVQQIGDREYERFDLNNSSNLVKRKLKIAALCGGQQATDGVP--------IWQHDLIVVTAAYCEQLIMRNVLRWEDLCIVVFDEAHHCTKSHPFNKLLEKNHLTIPE------------PERPKVLGLTASPAGKKTFAITVTMLQNLMTSMGGAKIGVTRDNQAELKRYQSSAKLIVSYQPMNVDEQKIQTEFQKYLLGCYLRLS---SETNISEKMDDNMIPNNAEDLHGDVLNCLEVTL-SDTEPID----------SSLAKKI------------------------------------EHRNLV--KHTSFICMALNTLF---EAGVDTAVDELNELMDQ-----DPNLN--FEFAKRILLNPD--NLLSEIEKIKQKERDHLQTSLDTTDCPHSSKIYALVQTLLNSDY---IDWTQEKPMSLVLVKERATAIKISKILQEQKDIMKMGLKVTHLVGHGGGSGGGDGMAVQQQRKTLHNIKNHKYQIVIATSVAEEGIDIPECELVITMNLPSSVTALVQMRGRARKENS--KFVIFCNDKLEEDK--LNELLGREDNMIKAANCLFEGQ 1378          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: UPI00201F2A52 (uncharacterized protein LOC124142913 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F2A52)

HSP 1 Score: 126 bits (316), Expect = 2.970e-25
Identity = 156/644 (24.22%), Postives = 266/644 (41.30%), Query Frame = 2
Query:  839 LTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRG-----------------VVEMLVGSSLQGYGDGAGGVDHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRLEAELAAPVLN--LQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVARLAPVASEVRVQAKRLLGGMGD---RVGDAASAAT-AALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGGDPELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEA---ALPSVVQAQAVVGLS------GMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEAIGH 2674
            +T T PR YQ +LF   M  E + +++LPTG GK L++ M L  ML  NP R   FLV+   L +QQ+  + NE+                    +  L G+ L                   + + D++V+TA   ++ + K+ +  +    VV DEAHHC K+HPFNR+      + A+        R     PK++ LTASPAG  ++  TV  + +L   L     A V    + E+ R     +L++                            P + E R   K LL  +     ++ +  +  T    G +  + +D+ +   +   A  +R + A             +G+ +A  + P                 D      +++ +A +  ++ G  T  + L+  ++       +  + + +  E L QD  R+A  ++H     +               L   K                ++G+   AL+ V  R  AH ++  L+    A  + ++  +VVG        GM + QQ+  L+  +    NI+V+TSV  EG+D+P C LVVC + P + T LVQ+RGR R K+    FV L ++S   D+  +++I  RE+ M++A  H
Sbjct: 1288 VTNTMPRSYQVDLFCKTM--EGDKVIFLPTGTGKTLVSVMTLSCMLQRNPRRPVLFLVDKVLLVLQQSKYITNELGNRKYKRMTSDGEEQERELKIATLCGNILP-------------PDTTPLYKHDVIVSTAAYADNLLLKQQLRWEDFSLVVFDEAHHCAKNHPFNRL------LEAYHRPCQPEHR-----PKVLGLTASPAGRDSVESTVSMLHELFHNLGGASIAIVQGDCVGELKRYQSSAKLKI-------------------------NYEPFSDEERAFRKTLLVYIYQCYLKLSELCTIDTDCQWGVERMQGEDLEDLVERLDNAATERFVRA-------------LGNCQAKSQQP-----------QVKMNMDFLVNHCKILLIALSDLDVVGIPTAVADLKTFDQTPAQSGFQHAQGMGIQCEEL-QDAMRRAAHSAHVQQEFDDNPLHITLYTQLLTTLTNDKYINW------------KAGRNAMALILVRERAHAHRLSNFLKQTQFASANSLKITSVVGHGSGQADGGMKVKQQKKVLDGVKSKKYNIIVATSVAEEGVDIPECELVVCMNPPNTVTTLVQMRGRARKKDS--HFVILCKSSDEKDK--IQNILRREQFMMKAAEH 1839          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: A0A2B4RFJ4_STYPI (Dicer-like protein 1 n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RFJ4_STYPI)

HSP 1 Score: 121 bits (304), Expect = 5.290e-24
Identity = 93/259 (35.91%), Postives = 132/259 (50.97%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGV-VEMLVGSSLQGYGDGAGGVDHGMAKLQ---RVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRL-EAELAAPVLNLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLV 1597
            Q TRT P  Y  EL++  M    N + +LPTG GK L+A+ V+  ML LNP RQ  FLV+   L +QQ+  L+ E+  + V    GS         G V   M KL+   R+ E D+++ TA  + + +    +  D +  +VLDEAHHC KDHP+N + R F                    PK++ LTASPAGE +L  T  ++++LL  L +AEL     N QE+   T R   + ++ + T  E  LL  L K V
Sbjct:  516 QFTRTQPFNYHIELYSKAM--LTNGVCFLPTGTGKTLVAAQVIAHMLKLNPSRQVVFLVDRVLLVLQQSDCLRKELGHIRVADERGSFESTRPIRIGAVCGEMRKLEGNARIYEQDVLIITADCYRNHLNNGTLRFDDVSLIVLDEAHHCNKDHPYNVIIRDFYLQEDV---------HLGHRPKILGLTASPAGETSLEKTTKRLQRLLGNLGDAELLVVTRNGQELEEKTNRATPDCISASYTTHERDLLDILVKYV 763          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: UPI001CF516D3 (uncharacterized protein LOC114965382 isoform X1 n=7 Tax=Acropora TaxID=6127 RepID=UPI001CF516D3)

HSP 1 Score: 120 bits (302), Expect = 9.400e-24
Identity = 90/252 (35.71%), Postives = 131/252 (51.98%), Query Frame = 2
Query:  842 TRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGVVEMLVGSSLQGYGDGA---GGVDHGMAKLQ---RVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASEL----PKLVALTASPAGERTLYDTVVKVEQLLDRLE-AELAAPVLNLQEVMRLTPRVELELVNVTATIPE 1564
            TRT P  YQ EL+   M    NS+ +LPTG GK L+A++V+  ML LNP RQ  FLV+   L +QQ+  L++E+  +     GSS    G      G V   M KL+   R+ E D+++ TA  + + +    +  + +  +VLDEAHHC KDHP+N + R F               R  +L    PK++ LTASPAGE +L  T  ++++LL  L+ A L     ++Q +   T +   E V    T PE
Sbjct:  547 TRTEPYSYQRELYGKAM--TTNSVCFLPTGSGKTLVAALVIAHMLKLNPCRQVVFLVDRVLLVLQQSDYLRSELSHIRVADEGSSNSFNGTRPIRIGAVCGEMRKLEGNSRIYEQDVLIITADCYRNHLNNGTLRFEDVSLIVLDEAHHCNKDHPYNVIIRDFYL-------------REDDLLGHRPKVLGLTASPAGELSLDKTTKRLQRLLGNLDDARLLNVSRSIQNLDEKTNKAPPECVTALCTPPE 783          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: UPI000F54D33C (uncharacterized protein LOC113687008 isoform X2 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F54D33C)

HSP 1 Score: 120 bits (301), Expect = 1.150e-23
Identity = 93/259 (35.91%), Postives = 130/259 (50.19%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGV-VEMLVGSSLQGYGDGAGGVDHGMAKLQ---RVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDTVVKVEQLLDRL-EAELAAPVLNLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLV 1597
            Q T T P  YQ EL+   M    N + +LPTG GK L+A+ V+  ML LNP RQ  FLV+   L +QQ+  L+ E+  + V    GS         G V   M KL+   R+ E D+++ TA  + + +    +  D +  +VLDEAHHC KDHP+N + R F                    PK++ LTASPAGE +L  T  ++++LL  L EAEL     N  E+   T R   + ++ + T  E  LL  L K V
Sbjct:  476 QFTSTQPFNYQLELYRKAM--LTNGVCFLPTGTGKTLVAAQVIAHMLKLNPSRQVVFLVDRVLLVLQQSDYLRKELGHIRVADERGSFESTRSIRIGAVCGEMRKLEGNARIYEQDVLIITADCYRNHLNNGTLRFDDVSLIVLDEAHHCNKDHPYNVIIRDFYLQEDV---------HLGHRPKILGLTASPAGETSLEKTTRRLQRLLGNLGEAELLVVTRNGLELEEKTNRATPDCISASYTTQESNLLEILVKYV 723          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: UPI001EE54AB0 (LOW QUALITY PROTEIN: uncharacterized protein LOC124261980 n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE54AB0)

HSP 1 Score: 120 bits (300), Expect = 2.250e-23
Identity = 161/636 (25.31%), Postives = 275/636 (43.24%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEV--RGVVEMLVGSSLQGYGDGAGGVDHGMAKLQR--VREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASEL-PKLVALTASPAGERTLYDTVVKVEQLLDRLEAELAAPVLN--LQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLS---RVARLAPVASEVRVQAKRLLGGMGDRVGDAASAATAALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPP-----GFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRA--TWESTLEVLERGKTGGDPELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLEA---ALPSVVQAQAVVGLS------GMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEA 2665
            QLT+T PR YQ +LF   M  +R  +++LPTG GK L++ M L  ML+ NP R   FLV+   L +QQ+  + NE+  R    + V   +Q        +   +       + + DI+V+TA   ++ + K+ +  +    VV DEAHHC K+HPFNR+   +             R    EL PK++ LTASPAG  ++ +TV  +++L   L     A V    ++E+ R     +L++     +  E A    L   +     +++ L  +    +   +R+   + + V    + AT                  KF  AL                     G+ +A+ E P       F  N    HS++              V  A+ ++ G    T  + L+ L + +        + + +  + L QD  ++A  ++H                     L  S   ++   L   +    ++G+   AL+ V  R  AH ++  L+    A  + ++  +VVG        GM +  Q+  L+  +    +I+V+TSV  EG+D+P C LV+C + P + T LVQ+RGR R K+    FV L ++S   ++  +++I  RE+ M+EA
Sbjct: 1280 QLTKTIPRSYQVDLFCKTMDSDR--VIFLPTGTGKTLVSVMTLSCMLNQNPLRPVLFLVDKVLLVLQQSKYIFNELGDRMYKRLTVDGEVQERQLKIATLCGNILPTDNTPLYKHDIIVSTAAYADNLLQKQQLRWEHFSLVVFDEAHHCVKNHPFNRLLEGYH------------RPCPPELRPKVLGLTASPAGRDSVENTVSMLQELFHNLGGASIAIVQGDCVRELKRYQSHAKLKINYEPFSDEEKAFRKTLLMYICQCYLKLSELCNIDDVCQWGVQRMQRDLAEYVEHLDNVATG-----------------KFVQAL---------------------GNCQANSEEPQVKMNMEFVVN----HSSV--------------VLIALSDLDGSGIPTAVADLQTLNQNQARSGFHHAQGIGIECKEL-QDAMKRAAHSAH------------VQQEFDDNPLHISLYTQLLSTLTNDEYINWKTGRNAMALILVRERAHAHRLSNFLKQTTFASANSLKITSVVGHGSGPTDGGMKVKHQKRVLDGVKSKKYHIIVATSVAEEGVDIPECELVICMNPPNTVTTLVQMRGRARKKDS--HFVILCKSSD--EENRIQNILRRERFMMEA 1828          
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Match: A0A6J8D0A6_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8D0A6_MYTCO)

HSP 1 Score: 119 bits (299), Expect = 2.870e-23
Identity = 154/629 (24.48%), Postives = 266/629 (42.29%), Query Frame = 2
Query:  836 QLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLDLNPGRQAFFLVETTALAMQQATQLQNEVRGVVEMLVGSSLQGYGDGAGGVDHGM--AKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGKDHPFNRVARSFLTIRAFSSVATVARRRASEL--PKLVALTASPAGERTLYDTVVKVEQLLDRLEAELAAPVL-NLQEVMRLTPRVELELVNVTATIPEIALLGCLEKLVLSRVARLAPVASEVRVQAKRLLGGMGDRVGDAASAATAALGADVPRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPGFSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERGKTGGDP----ELDEALRVVKEHLLQDDARKAISNSHGGAGKEXXXXXXXXXXXXXXWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAML---EAALPSVVQAQAVVGLS-------GMTLNQQRLALESFRDGTKNILVSTSVCGEGIDVPPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLKSICLREKNMLEA 2665
            +LT T PR YQ ELF   M  +R  + +LPTG GK L++ M +  ML+ NP RQ  FLV+   L +QQ+  ++ E+ G       S L+        +  G+   K+  + + D++V TA  +E+ +  + +  +  C VV DEAHHC K+HPFN++ + +              R+  +   PKL+ LTASPAG  ++ +TV+ +  L+D L   + A V  N  E+ +     +++   +  +  E +    L+  +L    RL      ++        G+  +              +V       +  N     +                     G  EA +     FS N               ++    N+  A++ +     + +  E+ E      DP    E  EA+ +    +   DA +   N  G                        +L+++  ++       + S K    LV V +R+ A  +  +L   ++     ++ +AVVG         GMT+ QQ+  L+  +    +I+V+TSV  EG+D+P C LV+  + P++ T LVQ+RGR R      +FV L   S   ++  L+ +  +E+NM+EA
Sbjct: 1168 KLTTTTPRSYQIELFNKAMDSDR--VCFLPTGTGKTLISCMTISAMLEQNPTRQVMFLVDKVLLVLQQSEYIRREI-GDRNYTRFSKLEERKPVIAALCGGLQATKIPSLWKHDVIVVTAAFYENLLLNKILRWNDTCLVVFDEAHHCIKNHPFNKLLQGY-------------HRKCPKQTRPKLLGLTASPAGRDSVKETVMMLNLLMDNLGGAMIALVEENTYELKKYQSSAQIDPQYIEMSPKERSFKEELQLYLLKCYMRLGEETDLLQ----HFDIGLTSKTKHLTEEELLKCAKEVDG-----SLLNSLEITINM------------------AGPKEASKSGVKLFSRN---------------IIKHTQNICIALNVLIESGVYMAIEELQEL--MAADPCANFEFAEAILLPCARIK--DALQTCMNVEG----------PYLSFQNPDLDTSPQLSKLVEIVTRPA-YVNWSNKDAMVLVLVKQRETAFKIKQLLRSHDSIQKLQLKVEAVVGHGTTSGTEQGMTVAQQKQILDDMKRKAIDIVVATSVAEEGVDIPECELVITFNPPSTVTALVQMRGRARKNNS--KFVVLCNNS--KEKTELEDLMKKERNMIEA 1719          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU32_ECTSI0.000e+052.83DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A0H5R4I3_9EUKA6.440e-5631.34Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A1S3HGS0_LINUN6.180e-2626.83uncharacterized protein LOC106154762 n=1 Tax=Lingu... [more]
A0A8B8E0I7_CRAVI1.480e-2525.77uncharacterized protein LOC111130213 n=1 Tax=Crass... [more]
UPI00201F2A522.970e-2524.22uncharacterized protein LOC124142913 n=1 Tax=Halio... [more]
A0A2B4RFJ4_STYPI5.290e-2435.91Dicer-like protein 1 n=4 Tax=Pocilloporidae TaxID=... [more]
UPI001CF516D39.400e-2435.71uncharacterized protein LOC114965382 isoform X1 n=... [more]
UPI000F54D33C1.150e-2335.91uncharacterized protein LOC113687008 isoform X2 n=... [more]
UPI001EE54AB02.250e-2325.31LOW QUALITY PROTEIN: uncharacterized protein LOC12... [more]
A0A6J8D0A6_MYTCO2.870e-2324.48Uncharacterized protein n=1 Tax=Mytilus coruscus T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3377815..3388637 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1019.2
Seed ortholog evalue1.6e-294
Seed eggNOG ortholog2880.D8LU32
KEGG koko:K11592
KEGG Pathwayko05206,map05206
EggNOG free text desc.ribonuclease III activity
EggNOG OGsCOG0571@1,KOG0701@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-16_000030.1
Exons9
Model size4391
Cds size3813
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815480.5159757-UTR-P-fluviatile_contig11:3377814..33783131622815480.5159757-UTR-P-fluviatile_contig11:3377814..3378313Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3377815..3378313 -
1693562018.0209982-UTR-P-fluviatile_contig11:3377814..33783131693562018.0209982-UTR-P-fluviatile_contig11:3377814..3378313Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3377815..3378313 -
1622815480.7042737-UTR-P-fluviatile_contig11:3388558..33886371622815480.7042737-UTR-P-fluviatile_contig11:3388558..3388637Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3388559..3388637 -
1693562022.4370954-UTR-P-fluviatile_contig11:3388558..33886371693562022.4370954-UTR-P-fluviatile_contig11:3388558..3388637Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3388559..3388637 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815480.5295217-CDS-P-fluviatile_contig11:3378313..33785931622815480.5295217-CDS-P-fluviatile_contig11:3378313..3378593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3378314..3378593 -
1693562018.4689493-CDS-P-fluviatile_contig11:3378313..33785931693562018.4689493-CDS-P-fluviatile_contig11:3378313..3378593Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3378314..3378593 -
1622815480.5415711-CDS-P-fluviatile_contig11:3379339..33803741622815480.5415711-CDS-P-fluviatile_contig11:3379339..3380374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3379340..3380374 -
1693562018.4890685-CDS-P-fluviatile_contig11:3379339..33803741693562018.4890685-CDS-P-fluviatile_contig11:3379339..3380374Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3379340..3380374 -
1622815480.5528574-CDS-P-fluviatile_contig11:3380865..33819411622815480.5528574-CDS-P-fluviatile_contig11:3380865..3381941Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3380866..3381941 -
1693562018.5014427-CDS-P-fluviatile_contig11:3380865..33819411693562018.5014427-CDS-P-fluviatile_contig11:3380865..3381941Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3380866..3381941 -
1622815480.5663867-CDS-P-fluviatile_contig11:3382705..33828281622815480.5663867-CDS-P-fluviatile_contig11:3382705..3382828Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3382706..3382828 -
1693562018.5111034-CDS-P-fluviatile_contig11:3382705..33828281693562018.5111034-CDS-P-fluviatile_contig11:3382705..3382828Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3382706..3382828 -
1622815480.576423-CDS-P-fluviatile_contig11:3383536..33836981622815480.576423-CDS-P-fluviatile_contig11:3383536..3383698Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3383537..3383698 -
1693562021.675183-CDS-P-fluviatile_contig11:3383536..33836981693562021.675183-CDS-P-fluviatile_contig11:3383536..3383698Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3383537..3383698 -
1622815480.587683-CDS-P-fluviatile_contig11:3384743..33849201622815480.587683-CDS-P-fluviatile_contig11:3384743..3384920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3384744..3384920 -
1693562022.3864594-CDS-P-fluviatile_contig11:3384743..33849201693562022.3864594-CDS-P-fluviatile_contig11:3384743..3384920Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3384744..3384920 -
1622815480.5996275-CDS-P-fluviatile_contig11:3385326..33858451622815480.5996275-CDS-P-fluviatile_contig11:3385326..3385845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3385327..3385845 -
1693562022.4055173-CDS-P-fluviatile_contig11:3385326..33858451693562022.4055173-CDS-P-fluviatile_contig11:3385326..3385845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3385327..3385845 -
1622815480.611603-CDS-P-fluviatile_contig11:3386845..33870851622815480.611603-CDS-P-fluviatile_contig11:3386845..3387085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3386846..3387085 -
1693562022.4161947-CDS-P-fluviatile_contig11:3386845..33870851693562022.4161947-CDS-P-fluviatile_contig11:3386845..3387085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3386846..3387085 -
1622815480.6230788-CDS-P-fluviatile_contig11:3388357..33885581622815480.6230788-CDS-P-fluviatile_contig11:3388357..3388558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3388358..3388558 -
1693562022.4264693-CDS-P-fluviatile_contig11:3388357..33885581693562022.4264693-CDS-P-fluviatile_contig11:3388357..3388558Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3388358..3388558 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1289.1prot_P-fluviatile_contig11.1289.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 3378314..3388558 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1289.1

>prot_P-fluviatile_contig11.1289.1 ID=prot_P-fluviatile_contig11.1289.1|Name=mRNA_P-fluviatile_contig11.1289.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1271bp
MSQAKRGSVNQDRDESESKRCRIRPASHEYPVAAAASVDETAAEAGDVAP
SQHLPPAAEAMSLQCAECKGSIVDRRTAGEKLSFCKDGTSLHLVMGATNE
DREGIGFKVAGVPVDKLPNEKNPYRSVAYVRCANTRPDKGGRECNKKVGG
VKCYPPLSDNRLIFFQHKALLVDDQPARSWKMVRDSSLRDLRLLPAAKED
QARRFKPRQWPPLVKSVAAPPPPSTAGPSMTAASPLMLGAPQMTKGTLPN
AAQLTRTAPRGYQEELFAAVMGCERNSLVYLPTGLGKRLLASMVLRRMLD
LNPGRQAFFLVETTALAMQQATQLQNEVRGVVEMLVGSSLQGYGDGAGGV
DHGMAKLQRVREADIVVATAGAFEHCMCKEYVDPDSICCVVLDEAHHCGK
DHPFNRVARSFLTIRAFSSVATVARRRASELPKLVALTASPAGERTLYDT
VVKVEQLLDRLEAELAAPVLNLQEVMRLTPRVELELVNVTATIPEIALLG
CLEKLVLSRVARLAPVASEVRVQAKRLLGGMGDRVGDAASAATAALGADV
PRVDDMWNFPNKFFTALCQRALAASGGGGGANRGWAGVGDWEADEEAPPG
FSSNGGGDHSNIQGRDHPSMLYRLMNVAFAVDEIGGRATWESTLEVLERG
KTGGDPELDEALRVVKEHLLQDDARKAISNSHGGAGKEEGEAAAAAATSG
GGWLAGSKLARITLLLEEHKRECDRSGKRFSALVFVSRRDLAHAVAAMLE
AALPSVVQAQAVVGLSGMTLNQQRLALESFRDGTKNILVSTSVCGEGIDV
PPCALVVCASLPASGTDLVQLRGRIRSKEKGCRFVGLTRTSGAADQAHLK
SICLREKNMLEAIGHLSAGRGSESLAAAGMASGEAPGLAAAKAVTVAGTR
GRAGFSNSISSGSGGSIGGGSGSSIGGGGDRSSIKAEDKAVPNGASPRRK
VTPGSAGSGKDILVNIFSGGGGGGSRGGGGSGSGSISASPTSDEGKDFSE
TSSIAAPSTFSGGFGSAPDGGDAERESRPRLPPTLPPCDGSPPVKDPPAA
GTGSAAATSPSVSPTRAPAGVEAHPSADASVDVDIDHTVGAVAREETGDG
QAGAESGDSGGGGSGGCSGSGSDTGFTVAAAATGDEDRKGWNKILPTILS
PAARRYAAMYLATCVRQALTKNPNQMARSTLNSAAQLAHTIKPAFDYHER
KVAGPSNAVPFVFEARCVVSSHLEELSGLILVKRATGTTIKAARENAAVK
VRNYLLAKDVPKAQPPAATP*
back to top

mRNA from alignment at P-fluviatile_contig11:3377815..3388637-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1289.1 ID=mRNA_P-fluviatile_contig11.1289.1|Name=mRNA_P-fluviatile_contig11.1289.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10823bp|location=Sequence derived from alignment at P-fluviatile_contig11:3377815..3388637- (Porterinema fluviatile SAG_2381)
TGTCCATATCGTGCTCTGAGCCCGAGGGCATACTTTCTCAGAGCGGTAGA GGACTTCCTTGGTTCTGGGCGGCTTGTGCATGTCCCAGGCGAAGAGAGGC TCCGTAAATCAGGACAGAGACGAGAGCGAGAGCAAACGGTGCAGGATCCG CCCGGCAAGCCACGAGTACCCAGTGGCAGCCGCGGCATCAGTAGACGAGA CGGCAGCAGAGGCAGGCGACGTTGCACCGTCGCAGCACCTTCCACCCGCG GCAGAAGCCATGAGTCTGCAGTGTGCCGAGGTGAGAGCGACTCCTCCTCC TCGTTGGCCGACCCATTGCCTAGCCCGCGCAACACCGCGCACGCACTCAT GATTTTTGTTGGCATCTCAAGCCACGCCCCCCTTGAAGTCTGTGTGAAAA ATGGGAGCCAGCATCAGGGTCAGTAGGACTGACGCGGACGGCGCGGTAGT TGTACAGGTGAGATACGGTCGGTCGCTCGAGCGGTGCCAGCAGATACCTG TGTTTTTTTTCAGACATCGGAGGTTGCACACTGGTGGACACTTGTACCTG GTAGTCTACATTGCAGCGCGCGCGGCGTGTCCCGGTCTGCTTCTGCAAAC CGAAGAAAACTGTAATCAGCGATCGACGACGGCCCCGTTCAGTTGTAGCG GCATAAGTCCAAACTCTCAACATGTATCGTGACCTAAAATATAGGGTGCA CGCCGCTGGTAGTGGTTTCCCATCCCTACTGTGATATGTCGTGGTTTGGG TCGTCTGTGACAGTCTCGTTCCTGGTCTCCAGCAGCCCCTTGCTCCTATG CAACTTCGCCGTACTCACCTGCGGAGCCCACGGCGAAAACTACTAGTATT GTCGCCTATTGCCTCTGCAACCATTTCGCCAGAAAGAATCGGCCGTGCCA CCTCCAGCAACACGCCAACGGGAGGCAGACTGGTACACTGGGGGGGGCTC GATCTTGCCGGTGTATCTATTTTCAGTACATGAATGGACGCTCGTGTTCG TGGATGCACGGACTTTCGGTATATCGGCTTGCCGGTTTGATGTTGCACAG TGTGTGAAGACTTGTGTCAGGGTGTATGCCGATTGATACACGGGAACTGA GCGCGCGCGGGTTGCGTGCTCACTTCATGTGGGCGCCTGCGTGAGCTTGT CTACTCCTGCGCGATGTTAGTACAATACTAAACCCAGTTTCGCTGAGCAA GACAGCGATACGAACAGCTCGTGCCTAGAGATTTGACCGCCATTATCATG GGTAACCGCACTAATCAACTCGCACGTTTGACGGCCTTCACAGACCTCCA CCTCTCACGGCGGTCCCACCTTCCTCCTCGTCTGTCTTGCCGTCTTGATT TGTGCCTTTTGCCTTTCTCGTTCCTTACGCCCTTGCTCCGTCCCCTTCGT CGCTCTCTGACGCTCTGTGCACACTTTTGCGCATGTGCGCGTTCCGTGCG CTCGTGTGCGGCGAACCCAACAAATACACCACTGCCACCATCGCCGCCGC CACCACCATCACCACCACCACCAATAACAACAACAACAAAACAACTACAA AGTGCAAAGGAAGCATTGTGGACCGCAGGACGGCGGGCGAAAAGCTCTCC TTCTGCAAGGACGGGACGTCGCTGCACCTGGTCATGGGCGCAACCAACGA GGACCGGGAGGGCATCGGATTCAAGGTTGCGGGCGTGCCAGTGGATAAGC TTCCTAACGAGAAGAACCCTTACAGATCGGTGGCCTACGTCCGCTGCGCT AACACTCGGCCAGACAAAGGCGGCCGGGAATGCAACAAGAAGGTATGAGG AGCGCGCGCCCGTTGGTGGACCGACTCCCTCTGTTTTGTCCGTGTGTCGT ATGCCTGCGTCGTGTGCCTGCTTCGTGGTGTGCCTGCTCACCTTTCGGCT AGCATTTTCCCAGTAGCTGCCGTCATGCCGGAAAGAGATCTTGATGGCAG TCGACGCCAGTGCCGTTCCGTTCTTGAGCGTTCCTGCGGGATCAGAATCC CTGCTTTTTTCACGCAAATAATGTTATCGTTTTCGCCGTTTTGTTCTGAA GCGTTTCGACGTAGTCCGAATTAATGCTCTTAATCATGCGAGAAAGAACC TCCTGGGTTGGTGCATTTTCAAGGTTTGTCAATGTCCCGCCAATACTGAC AAGAGTGGAGAGGGATTTACGGCACGCGTGTCACGATGCTGTAGCTCGTC GGTCCGAACACCTGTACAGGGCGATGCACGATGTTGTCGAGGGGGGACGC GGGTGCATGGTGGGAGAAAACGCTTCTTGTGGGGTAAGAAAAATATCACG CCAACACGGAGCGCGCTTCTTGATATCGTCTGCTCAAAACGCCCGGCGCC GACGCTGAAAGCGATTACGCGATGCGATATTCTCCCTGCCCCGACCACAC AAACTCTCCCTGAAACAAAGCGCCAATTAGCGTTGGGCCTTGCCGCTCCA TCCTCCTCTACAGAGACCAGAGAGCCGCAGCATCCACTCGATTATAATTT TCACGTACTTTGCGTTTCACTCGACTCGCCATCTTGGTTCACGACTTTTT CCGCGCCGCCTCACTAGGCCACAATCGACTCCTCCCCTCCTTGTCACCCC CCCGCATCGTTGTCCCCCCTCCCTGCCTCCCTCTCCTCCCCTCTTATTGG CACTCATTCCTTGTCGGCGACTCGTTGCGGTGGGACGCCTTCCTTGCCAT TCTGCTGCCGCACGCGGCTTATCCGAATGCACATGCTTCATGCGCTCGGT ACGACACGGCATGCCACGTCACGCAACCGGACGCTTGAAAAGGTCGGCGG TGTGAAGTGCTACCCCCCCCTGTCGGACAACCGTCTGATTTTCTTCCAGC ACAAGGCCCTCCTAGTGGACGACCAGCCGGCCAGAAGCTGGAAGATGGTC CGCGACAGCAGCCTGAGGGATTTGCGCCTCCTCCCCGCGGCCAAGGAGGA CCAGGCCAGGCGGTTTAAGCCCCGCCAGTGGCCCCCTCTCGTCAAGAGCG TCGCCGCCCCGCCCCCCCCTTCGACGGCTGGCCCGTCGATGACGGCAGCT TCGCCACTGATGTTAGGGGCTCCGCAGATGACGAAAGGGACCCTGCCGAA CGCCGCTCAGCTGACGAGGACCGCGCCCCGCGGGTACCAGGAGGAGCTTT TTGCCGCCGTAATGGGGTGCGAGCGCAACTCCCTTGTGTACCTGCCGACC GGTCTCGGGAAGAGGCTGCTGGCGAGCATGGTGCTGCGGCGGATGCTAGA CCTTAACCCGGGGAGGCAGGCGTTCTTCCTAGTGGAGACCACCGCCCTGG CGATGCAGCAGGTTGTTGGTAATTTCTTCGTGGGATGTAGATAATTTCGT GTTTCTTGGTGTTGGTGTCGTAGGGAAGGCACGACAGGACAGGAGATTGC TTCGTTTTGAGCCGCTTAGACGGTCATTTCTTGCGCGTTTGGTGTCTTCG TCGGCGAAGCGAAGCCGCCAATCTTGCGAACGTGGGTTGCTTTCTGTAGA TGATATGCAGAGCACAAGCGTCACCGTGTGTAGGGAAGACGTCCGAGACG TTTATTGTGATCCTTCAAAACCTTCAGACAGGCACCACCGCTGTTTGGTA ATTGAAGACGTGCCAGACGCCACATCAATCGATCGACGGAGCGATGTCCT CGTTGATATCCAATCCGCTACACTCACTGTGCCTTGCCATGCCGTGCCGT ACCGTGGCGCTCGTCAGGCGACGCAACTCCAGAACGAGGTTAGAGGCGTG GTGGAGATGCTGGTAGGTTCTTCTCTGCAGGGCTACGGCGACGGCGCCGG CGGCGTCGACCACGGAATGGCCAAGCTCCAAAGAGTGCGGGAGGCGGACA TCGTGGTGGCCACCGCCGGCGCTTTCGAGCACTGCATGTGCAAGGTGAAC ACATCTCTCGCGTGGGTGTGGGGGGTTTCTTGGTTCGGATCTGAGGCGCA ATACAGAAGGGCGGAGGGGGGTCGCTCACGTCCGTTGTGAGTTTGTTTTT GCGTCACGCATCACGCCTGGTGAGGAGAATGAGCACCGAATCATGGTGCT GGTTGTTTTGAGGCAGGCTTGCTTGACTCGTGTTTTGCTCTCGTCGTTTC ATGTCGCTTGCGGTCTTTCATTCACGAGTGTGCGCTTAAGTGCTCGTCAT AGCTTCTCCAGTGTGTGTCGTACGCTGTTCGTTCACATGGTCGAGAACAT GAGTCCGCCGCGGGCGATATACGCGGGCTGAAAGGTGGGCAGAGTGGACT GGCGAGCAGCCAGATGGACACGGGTGTAGGTGGTGCCTGGTTCCCGAATA ATCACGCGTTCGCACTCGTCCTCGTAGCGAGCGAGCTCGTATATTCGCAT CCCATTACCGGCTCCCTCCTATGCGTAGGAGAAGCACCATATGAGCTCGT TTGGCGAGTGTCTCGAAGAACACGCTTGTTCGGTAGCTTCGTTGGCAGCC GAAAATAAATTGCGGGTGCTTTGATTGTGGCCTCAAACATTGAACCACCC AATGAGCATGCTTCGGAGAGTGTGTTTGCCACGTACGCGCGTTGGCACGT GGTTGCCGGCAGATTCAGATGCCCTTGGGACGAAGGCTTGACATGGGGGG CATAGCACTCGTGAGGCACGGTTCACGGAGTCCTGCCGCGCAGCAGAACC CCAAGGACAAGATCAAGGTTCATGAGTCCGACCGTGATATGAACAAAACT CACGCAGACCAAAATATCCATCGATGAAAAAGGAACTTTCCCCCCTGTGC ACAAGTCCCTTCTTGCGCCCCTCGGATTCAACCGACTTTTTCCTTCCTGT CTCAGGACCTTTCTCTGGAACCGCCCTTCCTCCCTCCCCCCCCCCCCATC CCTCTCAAACGCGCACTCTCGCCCCCCCCAACCCCCCCTGTTGTCGCCAC CGCCCGCGTCGCCGCCGCTACTGCCGCCGCCGCCGCCAGGAATACGTCGA CCCGGACTCGATCTGCTGCGTGGTGCTGGACGAGGCTCACCACTGCGGCA AGGACCACCCTTTCAACAGAGTGGCGAGGTCGTTTCTGACGATCAGGGCA TTCTCCTCGGTGGCCACGGTTGCCCGCAGGCGTGCAAGCGAGCTCCCAAA GGTAAGACAAAAGTATCTGATACATCCATCCGTCGACATACAGCTATGTC TTTTTTGCTCATCTACCTTTTCATCCATCGATCGATCACTCTTTTCATGT GTCGATCCAACCCTCCCTCTGTCGACCCATCTATCGATGTGTCCACCCAC CCTTCCATCTATCTTGGCCTTTGTATTGTTCGCGTGGTCTGTATATTTTT TCGGGTTGCAGAGTGGTTCGAAGGCAACAAGCCATTTACCGTAAGGCACA GGTGTGTACACGAAGTTCCCCTCCAGGTGATTGGATGCGAATCTTGAGTG CCCCGGAGACTCTTGCGTGCTGGGACCGAATACGGTGGCTTTGAAAAGGC CGCCAACGGTGTCCGGGAAACGTGCGGGTTGGCGATGATACCCCTCGTTG CGATGGGCAGTCATGCTTTGAAATTCGTTTGAAGGAGATGTGGACGGGGC GCACACCACTGCGTGAACGGCGGCACCTCGCGACGGAAGGATGAAACGCA CTTTGTTACCCTCGCCTGGGGAATGGAGAATTTTCGACTTTGTCCAGAAT GGCGCCCGGCCGGCGCGCAAGCACACCCACGCAGATCACGTTCCGACCGG GACGCTTTTGGAAACACGTTGATGAACAAGCCCCCGCCTACCCTATACTT CGTCCTCGTGCACGGCCGGCTGGCTGGTGTGTTTGTGGGGAGTTGCGTCG TATCGGCAGTTGGTGGCGCTGACGGCTTCGCCGGCGGGCGAGCGTACGCT GTACGACACCGTGGTGAAGGTTGAGCAGCTGCTGGACAGGCTTGAGGCGG AGCTGGCGGCGCCCGTTCTCAACCTCCAGGAGGTCGGTGTTTTGCCGATT GTTTCTGCTTGTCTTCTTGCTGCTGCTACTGCCTCTGCAGTAGTTTCTGT TGTTGTTGGCGTTGGTGTTGGTGTTGGTGGTATAGGGGGTGTTGGTGGCG TTGGTGTTGTTGTTGTTGCTTCTGCTGCTGCTTTCATTGTTGTGCTAGTT CTTGTGCTTGTTTTGTTGCCTCTGTGCTTCATTTTGTTCTGTTTTTTTCT TATCCTTGCCATTGATCTCGCCGAGTTTTAGTTTGTTGCTGTTGTTGTTG CTGCCAGTCGTCATCGCTGCTGACTGTCACCAATGCGGCGAGATCGTGCT TGACAGGGTGGGTTTTGGCCTGTTTAGGCGCTCTACCAACCGGCGTTGGC CCTACAAGTGTTTCTAATATTCGAACGTCACGCAATGCTCCATGCTCTGT CTCTTGCTGCCGTGAGTATTTGCCGTCATTGAGGCAAGCAGCCACCCCAA AATTGGCGAAAGTGAGGATGTTGCTCGCCTTCACACCTTCGGATGGCTGG CACAAACCGCTTCCCTAGGCCTGCGTTGCCACGAATCTGCACAAAACATT ACGTCACTCACTCCGCCTGTGATACGCCGGAGCCCCCTTCCTCACGGAAC CACTTTCCTGCCCTTCCTGGTCTACCTTCTGGCGATCCCTATCCATTCAT TTTTGCACCCCCGCTCTCGACTCGATCAAGACCATGACCTTAGTTCTTTC CTCGAGGCTTTTTTTGACACACACACACCCTCCCCCGCTCTGCCAGGTGA TGCGGCTCACACCGCGCGTCGAGCTTGAGCTCGTGAACGTGACGGCCACG ATCCCGGAGATCGCTCTGCTGGGCTGCCTCGAGAAACTGGTTCTCTCCCG CGTGGCCAGGCTGGCCCCCGTGGCCTCCGAGGTGCGCGTGCAGGCGAAGC GTCTCCTCGGCGGGATGGGCGACCGAGTCGGGGACGCAGCCTCCGCCGCC ACTGCCGCCCTCGGCGCGGACGTGCCCCGCGTGGACGACATGTGGAATTT TCCGAACAAGTTCTTCACGGCGCTGTGCCAGCGGGCGCTGGCGGCGAGCG GCGGGGGCGGGGGCGCGAACCGGGGCTGGGCCGGGGTCGGAGACTGGGAG GCCGACGAGGAGGCGCCGCCGGGCTTCTCCAGCAACGGCGGCGGCGACCA CAGCAACATTCAGGGCAGGGATCACCCATCCATGCTGTACAGGCTGATGA ACGTGGCCTTCGCGGTGGACGAGATCGGCGGCAGGGCCACGTGGGAGAGC ACTTTGGAAGTGCTCGAGAGGGGGAAGACCGGCGGCGACCCCGAGCTCGA CGAGGCCCTTCGTGTGGTCAAGGAGCATCTCCTGCAAGATGACGCTAGGA AGGCAATCTCGAACTCGCACGGCGGAGCCGGCAAGGAGGAGGGCGAGGCA GCGGCGGCGGCTGCGACCAGCGGCGGCGGTTGGTTGGCCGGTTCCAAGCT CGCAAGGATCACCCTGCTACTGGAGGAGCACAAGCGCGAGTGCGACAGGT CTGGAAAGAGGTTCTCCGCGCTGGTGTTCGTGTCGAGGCGGGACCTGGCG CACGCCGTCGCCGCCATGCTAGAGGCGGCCCTGCCGTCCGTCGTGCAGGC GCAAGCCGTCGTGGGGCTGTCGGGGATGACGCTGAACCAGCAGCGCCTAG CTTTAGAGTCCTTCCGCGACGGCACGAAGAACATCCTGGTGTCGACGTCC GTGTGCGGGGAGGGTATCGACGTGCCCCCCTGCGCACTGGTGGTGTGCGC CAGCCTCCCCGCGAGCGGGACGGACCTGGTGCAGCTGAGGGGTCGCATAC GGAGCAAGGAGAAAGGCTGCCGGTGAGTTGGAATGAGTTGAACGAATGAG GAGGGTAGGCAGGTGAGAGTATGGGGGGGGTTGAGCTGTGAGTGATGGAG TGAAGGGAAGAACGAGAGTGAAGTTTCGAAAAGATACCACTCGAGCCTTC CCTCACTGACTTCGTAGCGTATTTCTTCCAGCGAATTTGTTACCTGGTTT AGGTCCAATCTTGCCCCGAATTTTCAACCCACTTTTCCTGAACAACCCTG TTTTCAACTGTTTCAATGCTATCAGATGTCCCATACGCTTGCGCAACTCA GTACTATTTTTAGTGTTTTTTGTTGGCGTCGTGACAGGGCAATTAACCCC AATGACCCCTCGACTGTAACGCATTCCGGTGAGTACACTTTCTCTCGCCT CTAACAAAGACAGTAGTGCAACTCACTCTGTCGCTTGTTTCCAACTTTGT GCAAACGTCGTCAGTGGTCGTTACCGCCTCTTGAATGGCGCGCTTGCTCG CGCGCGCTTGCAGGTTTGTGGGTCTCACGAGGACCTCCGGAGCAGCCGAT CAAGCTCACCTGAAGAGCATCTGTCTCCGTGAGAAGAACATGCTAGAGGC CATCGGGCATCTCTCGGCCGGCCGCGGCAGCGAAAGCCTCGCCGCCGCTG GCATGGCTTCCGGCGAGGCTCCCGGCCTGGCGGCCGCCAAGGCGGTCACG GTTGCCGGTACCAGGGGCCGAGCGGGCTTCAGCAACAGCATCAGCAGCGG CAGCGGAGGCAGTATCGGCGGCGGCAGCGGCAGCAGCATCGGCGGCGGCG GCGACCGGAGCAGCATTAAGGCTGAGGACAAGGCCGTGCCGAACGGCGCC TCCCCCAGACGCAAGGTGACGCCAGGTAGCGCCGGGAGCGGCAAGGACAT CCTGGTGAATATTTTTAGCGGCGGCGGCGGCGGTGGCAGCAGAGGCGGCG GTGGTAGCGGCAGCGGCAGCATCTCGGCATCGCCCACCTCCGACGAGGGG AAGGATTTCTCCGAGACTTCGTCCATCGCGGCCCCGTCGACGTTTTCCGG GGGTTTCGGCAGCGCCCCGGACGGCGGGGACGCGGAGCGCGAGTCACGGC CGAGACTACCACCAACGCTTCCACCGTGCGACGGCTCGCCCCCCGTGAAG GACCCGCCCGCCGCGGGGACGGGATCCGCGGCGGCGACTTCGCCGAGCGT TTCTCCCACCCGTGCTCCAGCCGGTGTCGAGGCGCATCCGAGCGCTGATG CCTCCGTCGATGTCGACATTGACCACACTGTAGGTGCGGTGGCGCGGGAG GAAACAGGCGATGGCCAGGCGGGGGCGGAGAGTGGCGACAGTGGAGGTGG CGGCAGCGGTGGCTGCAGCGGCAGCGGCAGCGACACGGGTTTTACGGTCG CGGCGGCGGCCACTGGAGATGAGGACCGCAAGGGGTGGAACAAGATATTG CCGACTATCCTCAGCCCGGCGGCGCGGCGTTATGCGGCCATGTACCTCGC GACGTGCGTGCGGCAGGCTCTGACTAAGAACCCGAACCAGATGGCCAGGT AAGAGCGTGTGTACGTGTGTTTTTTCGTGCATGTCCGCGTCGTGGCGTTT TGCGGGAGAAATCGTCAACATCAAAGCCGTTTTTGTGTTGTTGCTTCTGT CAAGTGCCATGGGGGGCGGTGGGGCCGGGCATGCGAGCGCCTCCAAGTTT GATGTCCTTTCTGCTCTTCTGTTGGCGGGAATGAAATGCGATGTTGACTC GGCTGTCGGTGAGATGGAAAGAATTGGACCGCCGAACCGCCCCGTTCGCG CGATTTCAAGCGCTGAACACGAACAACGTTGTACGGCAGCAAGTCGGAGG TGAGACACAGTCGTTTCTGGAGGCTAACTGCAGGGGGGGCGACAAAAATG TCGAAGACGCGATTCACGCACCTCGCACGCCCGGACAGCCATTGTCTGGT CGCTGGCGAGTTTGTTTCAACAGGATGGAACGAACGCTTTTGATCCCCTC AAACATCGGCCGCAGCAGCAACTCGCCTTACGCTGGAGTATTGCTATTTA TAGGTATGTTGGGTTGTGTAAGCCAGTCACTGCCCGCGACAGTCGTCCCT GAGTCTTTGTTGCATCGCCGTATCGAACTTGCTTTTTAATGGTGACGGAA GCGCCAAAGACGACGCCGAAAGCAACAAAACGTCAAATGTGACAACAACA GCCACAACAAGAACGGCAACACCCACCACCACCACCACCACAACAACAAC AACAAATACAACGATAATAGCTTTCCGCCGCCGGCTGGCCGCAGGTCCAC CCTCAACTCGGCGGCCCAGCTGGCGCACACGATCAAGCCCGCCTTCGACT ACCACGAGAGGAAGGTCGCCGGGCCGTCCAACGCCGTCCCGTTCGTCTTC GAGGCCCGCTGCGTCGTGTCGTCCCACCTCGAGGAGTTATCCGGTCTGAT CCTCGTCAAGCGTGCCACGGGCACCACGATTAAGGCGGCGAGGGAGAACG CCGCGGTAAAGGTCCGGAATTACCTGCTGGCGAAGGATGTTCCGAAGGCC CAGCCGCCTGCTGCTACCCCGTAGTGCGGTGGTGGGCGGCGGCGGAGGTT CCGAAGGTCCGGTACCCCGTAGTTGCGGCGGTGTTGGCGGCGCTAGGTTT TGGTTGCAAAGTAAATTACTCGGTTGCGGCGATTGCGCTGGAGAAGCGCC GCTGTCTATCCGCACAGCCAACTGCGGGTTCCGATTACTCGACCACCCTC CCTCCTCGACCCCCCGACCCTAGCCCCCCCAAACACCTGGCCCTTCGTTA CCTTTCCATTGGCTGTCGCGAGAGCGGTGGAAGAACCGAGACGCCATGTC GTACTTCAGAGTTGGACCCGCCGGCTATGCCGGAGTGTTGGGATCGTCGA AAACCGGAGCATTTTATTTACAGGGGAATGTCGAAACATCAGACGTTTGG GGTGTCAAACCGTATGTTATAAGCACAACTTTATAAAGGTGACCCCGGAC TGCTGCAGCTGTTTCATTTCTGCAAGCCGCACGGCACTGGCAGGGCGCCG AAGCCCCCGCCCCCAACCTCCCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:3377815..3388637-

>mRNA_P-fluviatile_contig11.1289.1 ID=mRNA_P-fluviatile_contig11.1289.1|Name=mRNA_P-fluviatile_contig11.1289.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7626bp|location=Sequence derived from alignment at P-fluviatile_contig11:3377815..3388637- (Porterinema fluviatile SAG_2381)
ATGTCCCAGGCGAAGAGAGGCTCCGTAAATCAGGACAGAGACGAGAGCGA
GAGCAAACGGTGCAGGATCCGCCCGGCAAGCCACGAGTACCCAGTGGCAG
CCGCGGCATCAGTAGACGAGACGGCAGCAGAGGCAGGCGACGTTGCACCG
TCGCAGCACCTTCCACCCGCGGCAGAAGCCATGAGTCTGCAGTGTGCCGA
GATGTCCCAGGCGAAGAGAGGCTCCGTAAATCAGGACAGAGACGAGAGCG
AGAGCAAACGGTGCAGGATCCGCCCGGCAAGCCACGAGTACCCAGTGGCA
GCCGCGGCATCAGTAGACGAGACGGCAGCAGAGGCAGGCGACGTTGCACC
GTCGCAGCACCTTCCACCCGCGGCAGAAGCCATGAGTCTGCAGTGTGCCG
AGTGCAAAGGAAGCATTGTGGACCGCAGGACGGCGGGCGAAAAGCTCTCC
TTCTGCAAGGACGGGACGTCGCTGCACCTGGTCATGGGCGCAACCAACGA
GGACCGGGAGGGCATCGGATTCAAGGTTGCGGGCGTGCCAGTGGATAAGC
TTCCTAACGAGAAGAACCCTTACAGATCGGTGGCCTACGTCCGCTGCGCT
AACACTCGGCCAGACAAAGGCGGCCGGGAATGCAACAAGAAGTGCAAAGG
AAGCATTGTGGACCGCAGGACGGCGGGCGAAAAGCTCTCCTTCTGCAAGG
ACGGGACGTCGCTGCACCTGGTCATGGGCGCAACCAACGAGGACCGGGAG
GGCATCGGATTCAAGGTTGCGGGCGTGCCAGTGGATAAGCTTCCTAACGA
GAAGAACCCTTACAGATCGGTGGCCTACGTCCGCTGCGCTAACACTCGGC
CAGACAAAGGCGGCCGGGAATGCAACAAGAAGGTCGGCGGTGTGAAGTGC
TACCCCCCCCTGTCGGACAACCGTCTGATTTTCTTCCAGCACAAGGCCCT
CCTAGTGGACGACCAGCCGGCCAGAAGCTGGAAGATGGTCCGCGACAGCA
GCCTGAGGGATTTGCGCCTCCTCCCCGCGGCCAAGGAGGACCAGGCCAGG
CGGTTTAAGCCCCGCCAGTGGCCCCCTCTCGTCAAGAGCGTCGCCGCCCC
GCCCCCCCCTTCGACGGCTGGCCCGTCGATGACGGCAGCTTCGCCACTGA
TGTTAGGGGCTCCGCAGATGACGAAAGGGACCCTGCCGAACGCCGCTCAG
CTGACGAGGACCGCGCCCCGCGGGTACCAGGAGGAGCTTTTTGCCGCCGT
AATGGGGTGCGAGCGCAACTCCCTTGTGTACCTGCCGACCGGTCTCGGGA
AGAGGCTGCTGGCGAGCATGGTGCTGCGGCGGATGCTAGACCTTAACCCG
GGGAGGCAGGCGTTCTTCCTAGTGGAGACCACCGCCCTGGCGATGCAGCA
GGTCGGCGGTGTGAAGTGCTACCCCCCCCTGTCGGACAACCGTCTGATTT
TCTTCCAGCACAAGGCCCTCCTAGTGGACGACCAGCCGGCCAGAAGCTGG
AAGATGGTCCGCGACAGCAGCCTGAGGGATTTGCGCCTCCTCCCCGCGGC
CAAGGAGGACCAGGCCAGGCGGTTTAAGCCCCGCCAGTGGCCCCCTCTCG
TCAAGAGCGTCGCCGCCCCGCCCCCCCCTTCGACGGCTGGCCCGTCGATG
ACGGCAGCTTCGCCACTGATGTTAGGGGCTCCGCAGATGACGAAAGGGAC
CCTGCCGAACGCCGCTCAGCTGACGAGGACCGCGCCCCGCGGGTACCAGG
AGGAGCTTTTTGCCGCCGTAATGGGGTGCGAGCGCAACTCCCTTGTGTAC
CTGCCGACCGGTCTCGGGAAGAGGCTGCTGGCGAGCATGGTGCTGCGGCG
GATGCTAGACCTTAACCCGGGGAGGCAGGCGTTCTTCCTAGTGGAGACCA
CCGCCCTGGCGATGCAGCAGGCGACGCAACTCCAGAACGAGGTTAGAGGC
GTGGTGGAGATGCTGGTAGGTTCTTCTCTGCAGGGCTACGGCGACGGCGC
CGGCGGCGTCGACCACGGAATGGCCAAGCTCCAAAGAGTGCGGGAGGCGG
ACATCGTGGTGGCCACCGCCGGCGCTTTCGAGCACTGCATGTGCAAGGCG
ACGCAACTCCAGAACGAGGTTAGAGGCGTGGTGGAGATGCTGGTAGGTTC
TTCTCTGCAGGGCTACGGCGACGGCGCCGGCGGCGTCGACCACGGAATGG
CCAAGCTCCAAAGAGTGCGGGAGGCGGACATCGTGGTGGCCACCGCCGGC
GCTTTCGAGCACTGCATGTGCAAGGAATACGTCGACCCGGACTCGATCTG
CTGCGTGGTGCTGGACGAGGCTCACCACTGCGGCAAGGACCACCCTTTCA
ACAGAGTGGCGAGGTCGTTTCTGACGATCAGGGCATTCTCCTCGGTGGCC
ACGGTTGCCCGCAGGCGTGCAAGCGAGCTCCCAAAGGAATACGTCGACCC
GGACTCGATCTGCTGCGTGGTGCTGGACGAGGCTCACCACTGCGGCAAGG
ACCACCCTTTCAACAGAGTGGCGAGGTCGTTTCTGACGATCAGGGCATTC
TCCTCGGTGGCCACGGTTGCCCGCAGGCGTGCAAGCGAGCTCCCAAAGTT
GGTGGCGCTGACGGCTTCGCCGGCGGGCGAGCGTACGCTGTACGACACCG
TGGTGAAGGTTGAGCAGCTGCTGGACAGGCTTGAGGCGGAGCTGGCGGCG
CCCGTTCTCAACCTCCAGGAGTTGGTGGCGCTGACGGCTTCGCCGGCGGG
CGAGCGTACGCTGTACGACACCGTGGTGAAGGTTGAGCAGCTGCTGGACA
GGCTTGAGGCGGAGCTGGCGGCGCCCGTTCTCAACCTCCAGGAGGTGATG
CGGCTCACACCGCGCGTCGAGCTTGAGCTCGTGAACGTGACGGCCACGAT
CCCGGAGATCGCTCTGCTGGGCTGCCTCGAGAAACTGGTTCTCTCCCGCG
TGGCCAGGCTGGCCCCCGTGGCCTCCGAGGTGCGCGTGCAGGCGAAGCGT
CTCCTCGGCGGGATGGGCGACCGAGTCGGGGACGCAGCCTCCGCCGCCAC
TGCCGCCCTCGGCGCGGACGTGCCCCGCGTGGACGACATGTGGAATTTTC
CGAACAAGTTCTTCACGGCGCTGTGCCAGCGGGCGCTGGCGGCGAGCGGC
GGGGGCGGGGGCGCGAACCGGGGCTGGGCCGGGGTCGGAGACTGGGAGGC
CGACGAGGAGGCGCCGCCGGGCTTCTCCAGCAACGGCGGCGGCGACCACA
GCAACATTCAGGGCAGGGATCACCCATCCATGCTGTACAGGCTGATGAAC
GTGGCCTTCGCGGTGGACGAGATCGGCGGCAGGGCCACGTGGGAGAGCAC
TTTGGAAGTGCTCGAGAGGGGGAAGACCGGCGGCGACCCCGAGCTCGACG
AGGCCCTTCGTGTGGTCAAGGAGCATCTCCTGCAAGATGACGCTAGGAAG
GCAATCTCGAACTCGCACGGCGGAGCCGGCAAGGAGGAGGGCGAGGCAGC
GGCGGCGGCTGCGACCAGCGGCGGCGGTTGGTTGGCCGGTTCCAAGCTCG
CAAGGATCACCCTGCTACTGGAGGAGCACAAGCGCGAGTGCGACAGGTCT
GGAAAGAGGTTCTCCGCGCTGGTGTTCGTGTCGAGGCGGGACCTGGCGCA
CGCCGTCGCCGCCATGCTAGAGGCGGCCCTGCCGTCCGTCGTGCAGGCGC
AAGCCGTCGTGGGGCTGTCGGGGATGACGCTGAACCAGCAGCGCCTAGCT
TTAGAGTCCTTCCGCGACGGCACGAAGAACATCCTGGTGTCGACGTCCGT
GTGCGGGGAGGGTATCGACGTGCCCCCCTGCGCACTGGTGGTGTGCGCCA
GCCTCCCCGCGAGCGGGACGGACCTGGTGCAGCTGAGGGGTCGCATACGG
AGCAAGGAGAAAGGCTGCCGGTGATGCGGCTCACACCGCGCGTCGAGCTT
GAGCTCGTGAACGTGACGGCCACGATCCCGGAGATCGCTCTGCTGGGCTG
CCTCGAGAAACTGGTTCTCTCCCGCGTGGCCAGGCTGGCCCCCGTGGCCT
CCGAGGTGCGCGTGCAGGCGAAGCGTCTCCTCGGCGGGATGGGCGACCGA
GTCGGGGACGCAGCCTCCGCCGCCACTGCCGCCCTCGGCGCGGACGTGCC
CCGCGTGGACGACATGTGGAATTTTCCGAACAAGTTCTTCACGGCGCTGT
GCCAGCGGGCGCTGGCGGCGAGCGGCGGGGGCGGGGGCGCGAACCGGGGC
TGGGCCGGGGTCGGAGACTGGGAGGCCGACGAGGAGGCGCCGCCGGGCTT
CTCCAGCAACGGCGGCGGCGACCACAGCAACATTCAGGGCAGGGATCACC
CATCCATGCTGTACAGGCTGATGAACGTGGCCTTCGCGGTGGACGAGATC
GGCGGCAGGGCCACGTGGGAGAGCACTTTGGAAGTGCTCGAGAGGGGGAA
GACCGGCGGCGACCCCGAGCTCGACGAGGCCCTTCGTGTGGTCAAGGAGC
ATCTCCTGCAAGATGACGCTAGGAAGGCAATCTCGAACTCGCACGGCGGA
GCCGGCAAGGAGGAGGGCGAGGCAGCGGCGGCGGCTGCGACCAGCGGCGG
CGGTTGGTTGGCCGGTTCCAAGCTCGCAAGGATCACCCTGCTACTGGAGG
AGCACAAGCGCGAGTGCGACAGGTCTGGAAAGAGGTTCTCCGCGCTGGTG
TTCGTGTCGAGGCGGGACCTGGCGCACGCCGTCGCCGCCATGCTAGAGGC
GGCCCTGCCGTCCGTCGTGCAGGCGCAAGCCGTCGTGGGGCTGTCGGGGA
TGACGCTGAACCAGCAGCGCCTAGCTTTAGAGTCCTTCCGCGACGGCACG
AAGAACATCCTGGTGTCGACGTCCGTGTGCGGGGAGGGTATCGACGTGCC
CCCCTGCGCACTGGTGGTGTGCGCCAGCCTCCCCGCGAGCGGGACGGACC
TGGTGCAGCTGAGGGGTCGCATACGGAGCAAGGAGAAAGGCTGCCGGTTT
GTGGGTCTCACGAGGACCTCCGGAGCAGCCGATCAAGCTCACCTGAAGAG
CATCTGTCTCCGTGAGAAGAACATGCTAGAGGCCATCGGGCATCTCTCGG
CCGGCCGCGGCAGCGAAAGCCTCGCCGCCGCTGGCATGGCTTCCGGCGAG
GCTCCCGGCCTGGCGGCCGCCAAGGCGGTCACGGTTGCCGGTACCAGGGG
CCGAGCGGGCTTCAGCAACAGCATCAGCAGCGGCAGCGGAGGCAGTATCG
GCGGCGGCAGCGGCAGCAGCATCGGCGGCGGCGGCGACCGGAGCAGCATT
AAGGCTGAGGACAAGGCCGTGCCGAACGGCGCCTCCCCCAGACGCAAGGT
GACGCCAGGTAGCGCCGGGAGCGGCAAGGACATCCTGGTGAATATTTTTA
GCGGCGGCGGCGGCGGTGGCAGCAGAGGCGGCGGTGGTAGCGGCAGCGGC
AGCATCTCGGCATCGCCCACCTCCGACGAGGGGAAGGATTTCTCCGAGAC
TTCGTCCATCGCGGCCCCGTCGACGTTTTCCGGGGGTTTCGGCAGCGCCC
CGGACGGCGGGGACGCGGAGCGCGAGTCACGGCCGAGACTACCACCAACG
CTTCCACCGTGCGACGGCTCGCCCCCCGTGAAGGACCCGCCCGCCGCGGG
GACGGGATCCGCGGCGGCGACTTCGCCGAGCGTTTCTCCCACCCGTGCTC
CAGCCGGTGTCGAGGCGCATCCGAGCGCTGATGCCTCCGTCGATGTCGAC
ATTGACCACACTGTAGGTGCGGTGGCGCGGGAGGAAACAGGCGATGGCCA
GGCGGGGGCGGAGAGTGGCGACAGTGGAGGTGGCGGCAGCGGTGGCTGCA
GCGGCAGCGGCAGCGACACGGGTTTTACGGTCGCGGCGGCGGCCACTGGA
GATGAGGACCGCAAGGGGTGGAACAAGATATTGCCGACTATCCTCAGCCC
GGCGGCGCGGCGTTATGCGGCCATGTACCTCGCGACGTGCGTGCGGCAGG
CTCTGACTAAGAACCCGAACCAGATGGCCAGGTTTGTGGGTCTCACGAGG
ACCTCCGGAGCAGCCGATCAAGCTCACCTGAAGAGCATCTGTCTCCGTGA
GAAGAACATGCTAGAGGCCATCGGGCATCTCTCGGCCGGCCGCGGCAGCG
AAAGCCTCGCCGCCGCTGGCATGGCTTCCGGCGAGGCTCCCGGCCTGGCG
GCCGCCAAGGCGGTCACGGTTGCCGGTACCAGGGGCCGAGCGGGCTTCAG
CAACAGCATCAGCAGCGGCAGCGGAGGCAGTATCGGCGGCGGCAGCGGCA
GCAGCATCGGCGGCGGCGGCGACCGGAGCAGCATTAAGGCTGAGGACAAG
GCCGTGCCGAACGGCGCCTCCCCCAGACGCAAGGTGACGCCAGGTAGCGC
CGGGAGCGGCAAGGACATCCTGGTGAATATTTTTAGCGGCGGCGGCGGCG
GTGGCAGCAGAGGCGGCGGTGGTAGCGGCAGCGGCAGCATCTCGGCATCG
CCCACCTCCGACGAGGGGAAGGATTTCTCCGAGACTTCGTCCATCGCGGC
CCCGTCGACGTTTTCCGGGGGTTTCGGCAGCGCCCCGGACGGCGGGGACG
CGGAGCGCGAGTCACGGCCGAGACTACCACCAACGCTTCCACCGTGCGAC
GGCTCGCCCCCCGTGAAGGACCCGCCCGCCGCGGGGACGGGATCCGCGGC
GGCGACTTCGCCGAGCGTTTCTCCCACCCGTGCTCCAGCCGGTGTCGAGG
CGCATCCGAGCGCTGATGCCTCCGTCGATGTCGACATTGACCACACTGTA
GGTGCGGTGGCGCGGGAGGAAACAGGCGATGGCCAGGCGGGGGCGGAGAG
TGGCGACAGTGGAGGTGGCGGCAGCGGTGGCTGCAGCGGCAGCGGCAGCG
ACACGGGTTTTACGGTCGCGGCGGCGGCCACTGGAGATGAGGACCGCAAG
GGGTGGAACAAGATATTGCCGACTATCCTCAGCCCGGCGGCGCGGCGTTA
TGCGGCCATGTACCTCGCGACGTGCGTGCGGCAGGCTCTGACTAAGAACC
CGAACCAGATGGCCAGGTCCACCCTCAACTCGGCGGCCCAGCTGGCGCAC
ACGATCAAGCCCGCCTTCGACTACCACGAGAGGAAGGTCGCCGGGCCGTC
CAACGCCGTCCCGTTCGTCTTCGAGGCCCGCTGCGTCGTGTCGTCCCACC
TCGAGGAGTTATCCGGTCTGATCCTCGTCAAGCGTGCCACGGGCACCACG
ATTAAGGCGGCGAGGGAGAACGCCGCGGTAAAGGTCCGGAATTACCTGCT
GGCGAAGGATGTTCCGAAGGCCCAGCCGCCTGCTGCTACCCCGTAGGTCC
ACCCTCAACTCGGCGGCCCAGCTGGCGCACACGATCAAGCCCGCCTTCGA
CTACCACGAGAGGAAGGTCGCCGGGCCGTCCAACGCCGTCCCGTTCGTCT
TCGAGGCCCGCTGCGTCGTGTCGTCCCACCTCGAGGAGTTATCCGGTCTG
ATCCTCGTCAAGCGTGCCACGGGCACCACGATTAAGGCGGCGAGGGAGAA
CGCCGCGGTAAAGGTCCGGAATTACCTGCTGGCGAAGGATGTTCCGAAGG
CCCAGCCGCCTGCTGCTACCCCGTAG
back to top