prot_P-fluviatile_contig1.18.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.18.1
Unique Nameprot_P-fluviatile_contig1.18.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length88
Homology
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BLAST of mRNA_P-fluviatile_contig1.18.1 vs. uniprot
Match: D8LFY0_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY0_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.540e-24
Identity = 58/83 (69.88%), Postives = 66/83 (79.52%), Query Frame = 0 
Query:    1 MEEPSASGKVQVGRTSKFSVLDPKGSKVKHVAAPAEEAVGGDEGEQLGTKKNGKRENKTRLTESTGKLIEEGRGKIGGEFILQ 83
            M  P+ +GKVQVGRTSKFSVLDPKGSKVKHV APA  A      +++  K +GKRE+KTRLTESTGKLIEEGRG IGG+F LQ
Sbjct:    1 MAGPAVAGKVQVGRTSKFSVLDPKGSKVKHVVAPAAAATAPTVADEVANK-DGKRESKTRLTESTGKLIEEGRGNIGGDFTLQ 82
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFY0_ECTSI1.540e-2469.88Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:218481..220755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.18.1mRNA_P-fluviatile_contig1.18.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 218481..221110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.18.1 ID=prot_P-fluviatile_contig1.18.1|Name=mRNA_P-fluviatile_contig1.18.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=88bp
MEEPSASGKVQVGRTSKFSVLDPKGSKVKHVAAPAEEAVGGDEGEQLGTK
KNGKRENKTRLTESTGKLIEEGRGKIGGEFILQAGRQ*
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