mRNA_P-fluviatile_contig11.1277.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1277.1
Unique NamemRNA_P-fluviatile_contig11.1277.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 1014 bits (2622), Expect = 0.000e+0
Identity = 518/532 (97.37%), Postives = 526/532 (98.87%), Query Frame = 2 
Query:  194 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGKQQG 1789
            MSAPVMVLPVNTKRETGRAAQLGNI+AAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALD CDALAETIDVDNGPQLK+LVDAAVGTKFSHRWG+KLVSMAIDAV+RVRTVVDG RVEVDVKRYARVEKIPGGEMEDC VLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYF+FLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQ LSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDM+DLGIWEPF VKTQTYKTAVEAACMILRIDDIVSGIK G++QG
Sbjct:    1 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDG-RVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG 531
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 832 bits (2149), Expect = 1.930e-295
Identity = 420/540 (77.78%), Postives = 468/540 (86.67%), Query Frame = 2 
Query:  203 PVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKC-----------------TWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIK 1771
            PVMVLP+NTKRETGR AQLGNISAAKAV++IIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP+L + +HPTQIV GYA ALQ AL+TC A+++ +D+ +   LKELV+AAVGTKFSHRWG+ LV MAIDAV +V   VDG R EVDVKRY RVEK+PGGE++ C+VLDGVMFNKDVTH++MRRRIE+PR+LLLDCPLEYKKGES TNVEVT+E+DWNTLLRMEEEY+ENICAQIVAF PDIVITEKGVSDLAQHY MKA+IT FRRLRK+DNNR+ARAVGAT+VSRPDEIQESDIGTGCGLFEVRKIGDEYF+FLE CKD KACTVLLRGGSKDVLNEVERNL DAMQVVRNVVFEPRLLPGGGATEMAV+  L++ A+  +G Q+W   A A A E IPRTLAQNCGA+VVR LTQLRAKHA  A                   TWGI+G TG + DM  LG+WEP++VK QTYKTA+EAACMILRIDDIVSG+K
Sbjct:    5 PVMVLPINTKRETGRTAQLGNISAAKAVSEIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAAAEPLLLQHLHPTQIVRGYAHALQVALETCTAVSKVVDLKDRAALKELVEAAVGTKFSHRWGDILVGMAIDAVTKVVCDVDG-RTEVDVKRYVRVEKVPGGELDQCRVLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDEYFAFLEQCKDPKACTVLLRGGSKDVLNEVERNLQDAMQVVRNVVFEPRLLPGGGATEMAVAAALTRAAEAADGAQRWPVAAVAGAFEAIPRTLAQNCGASVVRTLTQLRAKHAAPAAXXXXXXXXXXXXXAHTGVTWGINGVTGELADMDTLGVWEPYSVKVQTYKTAIEAACMILRIDDIVSGVK 543
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 815 bits (2106), Expect = 3.700e-289
Identity = 405/530 (76.42%), Postives = 464/530 (87.55%), Query Frame = 2 
Query:  194 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDG-GRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKA-QEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQG 1777
            M APVMVL   TKRETGR+AQLGNI+AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVI+LTGE L +AEP + R VHPT IV G+ RALQ +L+ C  +A  +D+++  Q+  +V +++GTKFS RWG +++ MA+ AV RV     G G+ EVD+KRY + EK+PGGE+ DC+VLDGVMFNKDVTH+KMRRRIENPR+LLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEV+KIGDEYF+FL  C+D KACTVLLRGGSKDVLNE+ERNL+DAMQV+RNVVFEP LLPGGGATEMAV Q L++ A  +VEGVQQW F A   ALEVIPRTLAQNCGANVVRV+TQLRAKH +    TWGIDG TG + DMKD+G+WEP+ VK QT KT++EAACMILRIDDIVSG+K+G
Sbjct:    1 MQAPVMVLNTTTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIVLTGETLLLAEPFIVRNVHPTVIVSGFTRALQHSLEVCKRVAVKVDLEDRAQMMSIVQSSIGTKFSARWGAQMIDMALTAVLRVVHEDGGSGQKEVDIKRYVKTEKLPGGELSDCQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDEYFTFLTQCQDPKACTVLLRGGSKDVLNEIERNLSDAMQVIRNVVFEPLLLPGGGATEMAVGQALARDAASKVEGVQQWPFAAIGKALEVIPRTLAQNCGANVVRVMTQLRAKHTSLDSSTWGIDGATGKLADMKDMGLWEPYNVKVQTLKTSIEAACMILRIDDIVSGMKKG 530
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 815 bits (2106), Expect = 1.080e-288
Identity = 404/531 (76.08%), Postives = 462/531 (87.01%), Query Frame = 2 
Query:  191 VMSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGKQ 1783
            +M APVMVL  NTKRETGR AQLGNI AAKAV+DIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+L +AEP L R +HPT IV GY +ALQ AL  C  +A  +D+D+  Q+ ++V + +GTKFS R+G+++V++A+ AVR+V      G+ EVD+KRY + EKIPGGE+ DC VL+GVMFNKDVTH+KMRRRIENPRVLLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEVRKIGDEYF F+E C D KACTVLLRGGSKDVLNE+ERNL DAMQV+RNVVFEP LLPGGGATEMAV Q L++ +  +EGV+QW + AA  ALEVIPRTLA+NCGANV+RV+TQLR KH      TWGIDGTTG + DM+DLG+WEPF VK QT KTA+EAACMILRIDDIVSG+ +G Q
Sbjct:   29 IMQAPVMVLNTNTKRETGRTAQLGNIMAAKAVSDIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILCLAEPFLMRNIHPTVIVSGYNKALQEALVVCKQMAVPVDLDDTKQMTDIVRSTIGTKFSSRFGDQMVNLALTAVRKVVKEGADGKKEVDIKRYVKTEKIPGGELSDCCVLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDEYFVFMEECADPKACTVLLRGGSKDVLNEIERNLGDAMQVIRNVVFEPLLLPGGGATEMAVGQALARSSVGLEGVEQWPYVAAGKALEVIPRTLAENCGANVIRVMTQLRTKHLTLDNATWGIDGTTGKLADMQDLGLWEPFVVKVQTLKTAMEAACMILRIDDIVSGMAKGPQ 559
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 806 bits (2082), Expect = 1.880e-285
Identity = 404/536 (75.37%), Postives = 464/536 (86.57%), Query Frame = 2 
Query:  191 VMSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVV------DGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGK 1780
            +M+APVMVL  NTKRETGR AQLGNI+AAKAV+DI+RTTLGPR+MLKMLLDPMGGIVITNDG+CILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP L R +HPTQIV GY++ALQ AL  C+ALA+ IDV++   L ++V A VGTKFS RWG  +V +A+D+V +V   V      +GG  E DVKRY RVEKIPGGE+ D KV+DGVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAF PDIVITEKGVSDLAQHYL+KA +TAFRR+RK+DNNRIARAVGA +VSRPDEIQE D+GTGCGLFEVRKIGDEYF+FLE C+  +ACTVLLRGGSKDVLNEVERNL DA+QVVRN+VFE +LLPGGGATEMAV Q L++ + EVEGVQQW +KA   ALEVIPRTLAQNCG NV+R++TQLRAKHA +   TWGIDG  G++  M+ LG+WEP+AVK QT KTAVEAACM+LRIDD+VSG+K+ K
Sbjct:    1 MMNAPVMVLNANTKRETGRTAQLGNIAAAKAVSDIVRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGGYKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDEYFAFLEQCEQPQACTVLLRGGSKDVLNEVERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARASTEVEGVQQWPYKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHA-QGPTTWGIDGEKGILVPMETLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMKKKK 535
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 798 bits (2060), Expect = 3.150e-282
Identity = 397/529 (75.05%), Postives = 452/529 (85.44%), Query Frame = 2 
Query:  194 MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGK 1780
            M APVMVL  NT+RE GR+AQL NI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILRE+DV HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML++AEP L++ +HPT IV GY RA+  ALD C  +A  +DV++  Q+ +LV+A +GTKFS RW +KLV MAIDAV +V    D GR EVD+KRY RVEKIPGGEM DC+VLDGVMFNKD+TH KMR+ IENPRV+LLDC LEYKKGESQTNVE+TKEEDWNTLLRMEEEYIENICAQIVA  PD+VITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+VSR +E++E DIGTGCG FE+RK+GDE+F+F E C +AKACT+LLRGGSKDVLNEVERNL DAMQVVRN+V+EPRLLPGGGATEMAV+  L K A  VEG  ++ F A   ALEVIPRTLAQNCGANVVR LTQLRAKH +    TWG+DG TG + DM++ G+WEPFAVK QT+KTAVEA CM+LRIDDIVSG+K+ K
Sbjct:    1 MQAPVMVLNTNTQREHGRSAQLSNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREIDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLALAEPFLSQDIHPTVIVQGYMRAMTLALDVCKEIAMDVDVNDRAQMTQLVEATLGTKFSSRWSSKLVGMAIDAVLKV-VKDDDGRKEVDIKRYCRVEKIPGGEMGDCRVLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVALRPDVVITEKGVSDLAQHYFVKAGITAFRRLRKSDNNRVARATGATIVSRTEELREEDIGTGCGRFEMRKVGDEWFAFFEACAEAKACTLLLRGGSKDVLNEVERNLQDAMQVVRNIVYEPRLLPGGGATEMAVAYELGKAALAVEGPARFPFAAVGQALEVIPRTLAQNCGANVVRALTQLRAKHTDPGNRTWGVDGETGAVRDMREAGVWEPFAVKVQTFKTAVEAGCMVLRIDDIVSGMKKRK 528
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A7R9U7E4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7E4_9STRA)

HSP 1 Score: 790 bits (2039), Expect = 1.460e-278
Identity = 391/533 (73.36%), Postives = 459/533 (86.12%), Query Frame = 2 
Query:  182 ICSVMSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGK 1780
            +   M  P+MV+ VNT+RETGRAAQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLS+AEP L R +HPT +V GY RALQ AL+TC  +A+ +D+++   ++ELV  AVGT FS R+GN ++ +A+DAVRRV T   G R EVD+KRYA+VEKIPGGE+ DC VL+GVMFNK  TH+KMRRRIENPR+LL DCPLEYKKGESQ NVE+T EED+ ++LRMEEEYIEN+C+ I+A  PDIV+TEKGVSDLAQHYL KA ITAFRRLRKTDNNRIARAVGAT+V RP+E++ESD+GTGCGLFEVRKIGDEYF+FLE CKDAKACT++LRGGSKDVLNEVERNL DAMQVVRN+VFEP+LLPGGGATEM +++ LS++A  VEGV QW F+A   ALEVIPRTLAQN GANV+R +T+LRAKHA+    T+GI G TG + DM + GIW+P++VK QT+KTA+E+ACMILRIDDIVSG K+ K
Sbjct:   25 LTDTMQTPMMVMNVNTQRETGRAAQLGNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVLTNDGHAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLSMAEPFLERNIHPTLVVKGYTRALQVALNTCKEIAKHVDIEDTASIQELVKTAVGTTFSSRFGNIVIGLAVDAVRRVVTY-SGDRPEVDIKRYAKVEKIPGGEIADCAVLNGVMFNKVPTHAKMRRRIENPRILLFDCPLEYKKGESQANVEITNEEDFESMLRMEEEYIENLCSHIIALRPDIVVTEKGVSDLAQHYLTKAGITAFRRLRKTDNNRIARAVGATIVHRPEEVRESDLGTGCGLFEVRKIGDEYFTFLEECKDAKACTIMLRGGSKDVLNEVERNLQDAMQVVRNIVFEPKLLPGGGATEMCIAEALSREASNVEGVDQWPFQAVGQALEVIPRTLAQNAGANVIRSITELRAKHASGGCRTYGIHGHTGRIADMAEEGIWDPYSVKVQTFKTAIESACMILRIDDIVSGTKKPK 556
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: M4B2C9_HYAAE (T-complex protein 1 subunit gamma n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C9_HYAAE)

HSP 1 Score: 759 bits (1959), Expect = 2.420e-266
Identity = 382/525 (72.76%), Postives = 441/525 (84.00%), Query Frame = 2 
Query:  206 VMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGK 1780
            V  +  NTKRETGR AQLGNI AAKAV+DI+RTTLGPRSMLKMLLDPMGGIV+TNDGN ILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIIL GE+L VAEP L   VHPT I+ G+ RAL T L     +   ID++N   +++LV +++GTKFS R GN +  +A+DAVR V      G  EVDVKRYA+VEKIPGGE+ED +VL GVMFNKDVTHSKMRRRIENPR+LLLDCPLEYKKGESQTNVE+T ++DWNTLLR+EEEYIEN+CAQ+VA  PD+VITEKGVSDLAQHY +KA ITAFRRLRKTDNNR+ARA GAT+VSR DEIQESDIGT CGLFEVRK+GDEYF+F E CK+  AC++LLRGGSKDVLNE+ERNL DAMQVVRNVVFEP LLPGGGATEM ++  L K+A E+EGV+Q+ F+A   ALEVIPRTL QNCGA+VVRV+T LRAK A E +  +G+DG TG +T  ++LG+WEPF VKTQ+ KTAVEAACM+LRIDDIVSG+ + K
Sbjct:   40 VRCVDTNTKRETGRTAQLGNIEAAKAVSDIVRTTLGPRSMLKMLLDPMGGIVMTNDGNAILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILAGELLVVAEPFLRHQVHPTVIIRGFHRALSTLLAIAKQMTHGIDLENKEDMRQLVQSSIGTKFSPRVGNLVSDLALDAVRTVVYTTASGHKEVDVKRYAKVEKIPGGELEDSRVLKGVMFNKDVTHSKMRRRIENPRILLLDCPLEYKKGESQTNVELTNDQDWNTLLRLEEEYIENLCAQVVAMKPDVVITEKGVSDLAQHYFVKAGITAFRRLRKTDNNRVARATGATIVSRADEIQESDIGTKCGLFEVRKLGDEYFAFFEECKEPGACSILLRGGSKDVLNEIERNLQDAMQVVRNVVFEPLLLPGGGATEMRLAHELKKRADEIEGVEQFPFRAVGEALEVIPRTLLQNCGADVVRVMTSLRAKQA-ETEEAYGVDGVTGKVTSSEELGVWEPFQVKTQSIKTAVEAACMLLRIDDIVSGLAKKK 563
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A485KTS9_9STRA (T-complex protein 1 subunit gamma n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KTS9_9STRA)

HSP 1 Score: 755 bits (1950), Expect = 1.610e-265
Identity = 386/529 (72.97%), Postives = 448/529 (84.69%), Query Frame = 2 
Query:  191 VMSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRV-RTVVDGGRVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQ 1774
            +M APVMVL  NT+RETGR AQLGNI AAKAV++I+RTTLGPRSMLKMLLDPMGGIV+T+DGN ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML VAEP L+R VHPT I+ GY +ALQ  L+T   +A+ ID+++ P ++ L+ ++VGTK+S R GN +  +A++AV  V RT    G+ EVDVKRYA+VEKIPGGE+E+ +VL GVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVE+T E+DWNTLLR+EEEYIEN+CAQIVA  PDIVITEKGVSDLAQHY +KA+IT FRRLRKTD NR+ARA GATVVSR DEIQ+SDIGT CG+FEVRKI DEYF+F E CKD  ACT+LLRGGSKDVLNEVERNL DA+QV RNVVFEP LLPGGGATEM ++  L ++A EV GV+QW FKA A ALEVIPRTL QNCGA+VVRV+T LRAK A  +   + +DG  GV+   ++L +WEP+ VKTQT KTAVEAACM+LRIDDIVSG+K+
Sbjct:    1 MMQAPVMVLNTNTQRETGRTAQLGNIQAAKAVSEIVRTTLGPRSMLKMLLDPMGGIVMTSDGNAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLVVAEPFLSRQVHPTVIIRGYHQALQVCLETAQRMAKKIDINDKPSMRNLIMSSVGTKYSPRVGNIVSDLALEAVLTVMRTNPVTGKKEVDVKRYAKVEKIPGGELEESRVLSGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVELTNEQDWNTLLRLEEEYIENLCAQIVAMKPDIVITEKGVSDLAQHYFVKANITCFRRLRKTDQNRVARATGATVVSRADEIQDSDIGTKCGVFEVRKIADEYFAFFEECKDPGACTILLRGGSKDVLNEVERNLQDALQVARNVVFEPLLLPGGGATEMRLAHELRQRAHEVVGVEQWPFKAVADALEVIPRTLLQNCGADVVRVMTALRAKVA-ASNGGFAVDGVKGVVVSTEELAVWEPYQVKTQTIKTAVEAACMLLRIDDIVSGLKK 528
[Close]
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Match: A0A7S2VZH4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZH4_9STRA)

HSP 1 Score: 756 bits (1953), Expect = 1.630e-265
Identity = 379/547 (69.29%), Postives = 451/547 (82.45%), Query Frame = 2 
Query:  203 PVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQLKELVDAAVGTKFSHRWGNKLVSMAIDAVRRVR----TVVDGG------RVEVDVKRYARVEKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANE----------AKCTWGIDGTTGVMTDMKDLGIWEPFAVKTQTYKTAVEAACMILRIDDIVSGIKQGKQ 1783
            PVMVL   T+R+TGR AQL NI+AA+AVADIIR+TLGPRSMLKMLLDPMGG+VITNDGNCILREVDV+HP AKSMIELSRAQDEEVGDGTTSVIIL GE+L ++E  +   +HPT IV GY RALQ AL  C+  A  +D+++   + +LV++++GTKFS RW + LV MA+ AVR V     T  DG       ++EVD+KRYA+VEKIPGGE+ D +VL GVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGE+QTNVE+T  EDWNT+LRMEEEY+EN+C +I+AF PDIVITEKGVSDLAQHYL KADITAFRRLRKTDNNR+ARA GA VVSR DEIQESDIGTGCGLFE++KIG+E+F FL+ C+D KAC+++LRGGSKDVLNE+ERNLADAM+V+RNVV++P+LLPGGGATEMAV+  L +   ++EGVQQ  F+A   A+EVIPRTLAQNCG +V+R +TQLRAKHA              CTWGI+G TG + +M +LGIWEPF+VK QT KTA+E+ACMILRIDDIVSG K+GKQ
Sbjct:   13 PVMVLNSKTQRQTGRQAQLSNITAARAVADIIRSTLGPRSMLKMLLDPMGGVVITNDGNCILREVDVSHPTAKSMIELSRAQDEEVGDGTTSVIILAGELLILSEQFIRNNLHPTVIVQGYNRALQEALKICERQALVVDINDNETMLKLVNSSIGTKFSSRWNSILVEMALKAVRTVARASSTSTDGSSSTYYNKMEVDIKRYAKVEKIPGGEISDSRVLKGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGETQTNVEITNTEDWNTMLRMEEEYVENMCMEIIAFQPDIVITEKGVSDLAQHYLAKADITAFRRLRKTDNNRVARATGAIVVSRTDEIQESDIGTGCGLFEMKKIGEEWFVFLDECEDPKACSIILRGGSKDVLNEIERNLADAMEVIRNVVYDPKLLPGGGATEMAVAMGLRRAGLKIEGVQQHPFQAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHAASYDEFEQGGTFKPCTWGINGVTGKLVEMDELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSKKGKQ 559
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU47_ECTSI0.000e+097.37T-complex protein 1 subunit gamma n=1 Tax=Ectocarp... [more]
A0A836CR16_9STRA1.930e-29577.78T-complex protein 1 subunit gamma n=1 Tax=Tribonem... [more]
A0A7S2SP58_9STRA3.700e-28976.42T-complex protein 1 subunit gamma n=1 Tax=Rhizochr... [more]
A0A7S2FP00_9STRA1.080e-28876.08T-complex protein 1 subunit gamma n=1 Tax=Florenci... [more]
W7TWK9_9STRA1.880e-28575.37T-complex protein 1 subunit gamma n=2 Tax=Monodops... [more]
A0A6S9KVF4_HETAK3.150e-28275.05T-complex protein 1 subunit gamma n=1 Tax=Heterosi... [more]
A0A7R9U7E4_9STRA1.460e-27873.36T-complex protein 1 subunit gamma n=1 Tax=Pinguioc... [more]
M4B2C9_HYAAE2.420e-26672.76T-complex protein 1 subunit gamma n=2 Tax=Hyaloper... [more]
A0A485KTS9_9STRA1.610e-26572.97T-complex protein 1 subunit gamma n=10 Tax=Saprole... [more]
A0A7S2VZH4_9STRA1.630e-26569.29T-complex protein 1 subunit gamma n=1 Tax=Eucampia... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3210114..3222210 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1016.5
Seed ortholog evalue4.4e-294
Seed eggNOG ortholog2880.D8LU47
Preferred nameCCT3
KEGG koko:K09495
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002199,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0005975,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006884,GO:0007154,GO:0007165,GO:0007166,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0008152,GO:0008361,GO:0009311,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009751,GO:0009826,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0009992,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0036211,GO:0040007,GO:0042221,GO:0042493,GO:0042592,GO:0042623,GO:0043170,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046677,GO:0046931,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055082,GO:0060255,GO:0060341,GO:0060560,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:0140096,GO:1901564,GO:1901700,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG0459@1,KOG0364@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionT-complex protein 1, gamma subunit
Ec32 orthologEc-16_000190.1
Exons14
Model size2545
Cds size1599
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1277.1prot_P-fluviatile_contig11.1277.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 3210307..3221457 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815477.8215115-UTR-P-fluviatile_contig11:3210113..32103061622815477.8215115-UTR-P-fluviatile_contig11:3210113..3210306Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3210114..3210306 +
1693561992.557271-UTR-P-fluviatile_contig11:3210113..32103061693561992.557271-UTR-P-fluviatile_contig11:3210113..3210306Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3210114..3210306 +
1622815478.0380511-UTR-P-fluviatile_contig11:3221457..32222101622815478.0380511-UTR-P-fluviatile_contig11:3221457..3222210Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3221458..3222210 +
1693561992.724007-UTR-P-fluviatile_contig11:3221457..32222101693561992.724007-UTR-P-fluviatile_contig11:3221457..3222210Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 3221458..3222210 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815477.836671-CDS-P-fluviatile_contig11:3210306..32104311622815477.836671-CDS-P-fluviatile_contig11:3210306..3210431Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3210307..3210431 +
1693561992.5707016-CDS-P-fluviatile_contig11:3210306..32104311693561992.5707016-CDS-P-fluviatile_contig11:3210306..3210431Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3210307..3210431 +
1622815477.851321-CDS-P-fluviatile_contig11:3212088..32121641622815477.851321-CDS-P-fluviatile_contig11:3212088..3212164Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3212089..3212164 +
1693561992.579205-CDS-P-fluviatile_contig11:3212088..32121641693561992.579205-CDS-P-fluviatile_contig11:3212088..3212164Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3212089..3212164 +
1622815477.8618474-CDS-P-fluviatile_contig11:3212650..32127471622815477.8618474-CDS-P-fluviatile_contig11:3212650..3212747Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3212651..3212747 +
1693561992.5873208-CDS-P-fluviatile_contig11:3212650..32127471693561992.5873208-CDS-P-fluviatile_contig11:3212650..3212747Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3212651..3212747 +
1622815477.8731859-CDS-P-fluviatile_contig11:3213786..32138451622815477.8731859-CDS-P-fluviatile_contig11:3213786..3213845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3213787..3213845 +
1693561992.59733-CDS-P-fluviatile_contig11:3213786..32138451693561992.59733-CDS-P-fluviatile_contig11:3213786..3213845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3213787..3213845 +
1622815477.8839722-CDS-P-fluviatile_contig11:3214980..32151171622815477.8839722-CDS-P-fluviatile_contig11:3214980..3215117Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3214981..3215117 +
1693561992.6071339-CDS-P-fluviatile_contig11:3214980..32151171693561992.6071339-CDS-P-fluviatile_contig11:3214980..3215117Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3214981..3215117 +
1622815477.8948307-CDS-P-fluviatile_contig11:3215607..32157491622815477.8948307-CDS-P-fluviatile_contig11:3215607..3215749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3215608..3215749 +
1693561992.616522-CDS-P-fluviatile_contig11:3215607..32157491693561992.616522-CDS-P-fluviatile_contig11:3215607..3215749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3215608..3215749 +
1622815477.9075763-CDS-P-fluviatile_contig11:3216489..32166031622815477.9075763-CDS-P-fluviatile_contig11:3216489..3216603Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3216490..3216603 +
1693561992.6269002-CDS-P-fluviatile_contig11:3216489..32166031693561992.6269002-CDS-P-fluviatile_contig11:3216489..3216603Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3216490..3216603 +
1622815477.923796-CDS-P-fluviatile_contig11:3217216..32173931622815477.923796-CDS-P-fluviatile_contig11:3217216..3217393Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3217217..3217393 +
1693561992.6354053-CDS-P-fluviatile_contig11:3217216..32173931693561992.6354053-CDS-P-fluviatile_contig11:3217216..3217393Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3217217..3217393 +
1622815477.936442-CDS-P-fluviatile_contig11:3217823..32179661622815477.936442-CDS-P-fluviatile_contig11:3217823..3217966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3217824..3217966 +
1693561992.6479049-CDS-P-fluviatile_contig11:3217823..32179661693561992.6479049-CDS-P-fluviatile_contig11:3217823..3217966Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3217824..3217966 +
1622815477.94786-CDS-P-fluviatile_contig11:3218846..32189611622815477.94786-CDS-P-fluviatile_contig11:3218846..3218961Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3218847..3218961 +
1693561992.6610622-CDS-P-fluviatile_contig11:3218846..32189611693561992.6610622-CDS-P-fluviatile_contig11:3218846..3218961Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3218847..3218961 +
1622815477.9598649-CDS-P-fluviatile_contig11:3219381..32194741622815477.9598649-CDS-P-fluviatile_contig11:3219381..3219474Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3219382..3219474 +
1693561992.6750515-CDS-P-fluviatile_contig11:3219381..32194741693561992.6750515-CDS-P-fluviatile_contig11:3219381..3219474Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3219382..3219474 +
1622815477.9694667-CDS-P-fluviatile_contig11:3219877..32199971622815477.9694667-CDS-P-fluviatile_contig11:3219877..3219997Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3219878..3219997 +
1693561992.6865947-CDS-P-fluviatile_contig11:3219877..32199971693561992.6865947-CDS-P-fluviatile_contig11:3219877..3219997Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3219878..3219997 +
1622815477.980729-CDS-P-fluviatile_contig11:3220667..32207991622815477.980729-CDS-P-fluviatile_contig11:3220667..3220799Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3220668..3220799 +
1693561992.6971219-CDS-P-fluviatile_contig11:3220667..32207991693561992.6971219-CDS-P-fluviatile_contig11:3220667..3220799Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3220668..3220799 +
1622815478.0230365-CDS-P-fluviatile_contig11:3221388..32214571622815478.0230365-CDS-P-fluviatile_contig11:3221388..3221457Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3221389..3221457 +
1693561992.7110972-CDS-P-fluviatile_contig11:3221388..32214571693561992.7110972-CDS-P-fluviatile_contig11:3221388..3221457Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3221389..3221457 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1277.1

>prot_P-fluviatile_contig11.1277.1 ID=prot_P-fluviatile_contig11.1277.1|Name=mRNA_P-fluviatile_contig11.1277.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=533bp
MSAPVMVLPVNTKRETGRAAQLGNISAAKAVADIIRTTLGPRSMLKMLLD
PMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILT
GEMLSVAEPILTRGVHPTQIVMGYARALQTALDTCDALAETIDVDNGPQL
KELVDAAVGTKFSHRWGNKLVSMAIDAVRRVRTVVDGGRVEVDVKRYARV
EKIPGGEMEDCKVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGE
SQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQ
HYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFE
VRKIGDEYFSFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNV
VFEPRLLPGGGATEMAVSQVLSKKAQEVEGVQQWAFKAAASALEVIPRTL
AQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMKDLGIWEPFAV
KTQTYKTAVEAACMILRIDDIVSGIKQGKQQG*
back to top

mRNA from alignment at P-fluviatile_contig11:3210114..3222210+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1277.1 ID=mRNA_P-fluviatile_contig11.1277.1|Name=mRNA_P-fluviatile_contig11.1277.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12097bp|location=Sequence derived from alignment at P-fluviatile_contig11:3210114..3222210+ (Porterinema fluviatile SAG_2381)
GAGGCTTTCGGAGGTCGCAGTACTCATCTTGCTCCAACACCCCCCTTTGA
TTTCCGAACCAGAGCGGGGGCTCTCACAGGCGAGGCAGGTGTGCAAAGCA
CAGCAAGGAAGACGTTCTTCCAGTCCCGTGGATCACCAACACGACACCTA
CAAGCGATAGCCTCTTCCTGCAGCAGCGAAAATCTGCTCAGTCATGAGCG
CCCCCGTGATGGTTTTGCCCGTCAACACCAAGAGAGAAACCGGCCGTGCT
GCGCAGCTTGGCAACATCTCAGCCGCAAAAGCAGTAGCCGACATCATCCG
GACAACCCTGGGGCCCAGGTAAGCACAGGAGGCCGAGGGCGAGCGCGAAT
TGTGGGCAGGACTGCTTACACAGCAGGCATTTTGCAGCGCACATGGCTGG
CTTTATTCTGTGTGATTTTGCTGAAAACCGGATCGCGAGGGGTGCGCTGG
TGTGTCGCTGTCGTCTCGCTGGCATCGATTTTTGAAATGTCCGAGAAATA
CTCCGGAGAAGATACTAAGATTTGTTGTGGAATAGGTGGTCTCGTGGGTT
CTATCCAGCGCGTGTGTTTAACGCATGCGGAAGCTACCGTTTCGAACATA
CGGAGAGCTGTGTTCGCCTCGGTACGGCTGGACTTCCCCTTACGTGCGCT
CGCGTGTGTGTGTCGCGGCAACCTTCGTCCTCAAAAGGAACGCCACATTT
CCGTGCAGGACGAGGGGTCAACACACGGGGGAAAGGTGTTAGCACATAGG
TCACATGAGATATCACACGCCCTGGGGTCGATTTTCAACGCTCAATTTCT
CCACGCTCAAAGATGTAGTGTCGTCAAAGGGAGCGGCTTTCGATAGAAGC
TGTCGAGAGCGTTGCAGTGACGTATCGTTCGATATTCGGCAACCTCTCGC
TGTCTAGATACCGAACTTCGAAAAACGATCCAAGGGGTGTGTTATCTTGT
GCGACCGACGGAATGTGTCCGGTGTGTTTCGCTGCAAGGGAAAAACGGAA
CGAGGAGCAGGCTCGCGGGTAGCTCAGTTGTAAACAATACTGTTGGGCAT
GGTGTGCGCTCGCGTGCGTGCCGTGACGAGTAGTCGGCTGCTGCTGCGGC
TTTGTATCAGCTTTTGTCGCCGCTAGAATGAAACAATAATATTATTGGAC
GTTTGGCAGGTTGAGGTTTTCGTATGCGACCCACCGCACGACCCACCGCA
CTAAGCACCAAACCGACGCCCAGGCGAGAACAGCGTACCACGTTAGATAG
TAGGAAAGCACAATGCGAATCAAGGCGCACGCGAACTCTGCTTACAATTC
CTGACGAGATTGTGTTTATATGCCGCTGAATTTTCTTTTGGAAATACTTT
GAAAGGAGAACTTCTGGGTCCTTGATACCTCCTTCGGACTCTCCCGCAAG
CTTTCATTTCCACGGTCGTGTGTGGTACGTGCCGTGAATTAGGAAGAGCT
TCGCTTTCTTGGAGCCGCTGCCAACCACTTTTTCAATTGACAGGCAAAGT
CGCTTCCATCTCGTGTTCTTTGGGGGGTAATTACAATGATGCCACAATTT
GATGTCATCAGCGGCTGGCTGGCTTTTGTGCCCAAAACTGCATTTTTGCG
ATGAGCGGCGGCACGTGCTGCCGTGGAGCCTGCTGCTGCGCTCGCATCAG
GCAGCACCCACGACCCAGCTGCTGATTGTGCATCGTGCGGGCCCTCGCGC
CTCTTCTTCTGTGCGCGATGATTTTACCACGACGGCGTAGCGTCGCGCTT
ATTTGTCGCACCACGCAACGCTGTGCTTATTTGTTGTCCAAGCCACCTAA
GTTGGTGTGGCGCTTTCTCTCATCCGGGTCAGCGCTCTCTTCTCGATTGC
GGCGGTGGCTACACGCCTGTTTGTCTATCTGTGTGTCTACCCGTCTGTAT
TTCTTTCCGCTCAAGCGTCTCTACTACCGCCGCCGCTGCTACTGCTGTTA
CTGCCCCGGCTGGTGCGTTGGTCAGGTCCATGCTGAAGATGCTTCTGGAC
CCGATGGGCGGCATTGTCATCACAAACGACGGCAACTGCATCTTGCGAGA
GGTGAGGGAGGGTTTCATACCCTGACATGACGACGTGCGCAAGAACGAGA
GGGCTTTGTTGTGGTGGGCGAAAGTCGCTTCGTCAAGACGTCGGAAAGCG
GCCCGCCTTCTTCGGTCGATGTGCGCGGGTGTGAAACGCCATGTTGAGGC
GACCGCGGTACGCATCGCCCAGCATATTTTTACGTGTGTTTTTTCGCTGA
GTGCCGTTTGACGTGCATCGTTACAGGTCAATTTCAAACTTGTCGCATCT
GTCTTTTAGACATTGAAGTATTGCCGCTGCTGCTGTGGGAGCGAGAACTG
TCCGTCTGCAGCACCACAGCGTTACTCGCAGCGGCGATGCTCCCAAGGAC
GTTTATCAGATGGATGCCCTGTGCGCTGATGCTTGCTCGCGAGCTGCGTT
CTACTCTTGTTCGACGAAAGGTGGGACTGATCCGTATGAGTGCGCGTTTT
GTGCATTTCCCCTGGATTGGAATGGGATCGACCCCAGGTGGACGTGGCGC
ACCCGGCCGCTAAGAGCATGATAGAGCTCAGCCGCGCGCAGGACGAGGAG
GTCGGCGACGGCACCACCTCCGTAATCATCCTCAGTGAGTGCAGCTTCCC
CGATTCCCCTTCAAAGTCATCAATGACCCCCGCTTCCCTCCCCTCTCACC
TCTTGACCCCCGAAGCACGTTCCCCACAGCGATCCCTCCCTGCTTTTTTT
TTGGGACATTCGCGACATTTCGGGATGTTTGCTTTGTAACACGAGTCTAC
TATCACCCGTGCCGCATGGTTTACAACCAAGGGGGACTTGTGCTGCGATC
GGGCGAAGAATGACCCCTACCTCCCCCTCGTCAGCGTTTTAATAGCTTGC
CTCTTCGCCGGCGTTGATGCATCCTCCGGGGGCGCAATGCGCGGTACCAC
TCTCGAAGCATCACATCTCAGTCAGCCTTGGCTTGCAACGAGTTGAGGTT
GGGGTCAATGTCACCACCCATCGTTCTGCGTGAAATGAGAATAACATTGT
CATAGCCGCTTTGTCATGAACTTGATCCCAAAACGCGAGAACCCCTGGCG
ATTCTGGAGCAACCTTACGCGACGCTCGTGTTGCCCCATTTTTTTTCCTT
TTTCACTAGCCGACTTTGCGCTGCACTCGTGCTTCCTTCCCACGCAAGCG
CTTCTGTTTCTTCGAGTGCGCTCTCTTGTCCTGCGTGTTGTTCGTTTTCA
CGAAATCGCTTTCTCCCATAACTTCGGATTCGCCGAAGGCATTGGAGGCC
TTTCTTTTCTTCGTGCGTGTGCCTGTCGGCTTGGCGTCCATCGCTCTCCG
AAACAAACGTTGCGTTACCGGTGAACTGATCGAGCTACTTCCCGAACTCA
ACATCCCCCCCGATAACTGGAGAGGTTCACGACTGAAGCGCTCTTCGAGA
GGGCTATCTTGTTGCGCTCAGCTACATGTAAGACAACTTCCTTGTTTTGT
GCCGCCTTCAAGGAAACGGCGCTGTTCATTTTTGCTTTTTTGCCCCCGAC
CAATCGCACCCCCGCCGCTTTCTTCCTTCTTCCCTTTTTTGCATTTCTTC
GATTTCTGCTTCCCTCGCTTGCTCTTCTCGAATCTGCTGCGTGGGCGTGC
TATCGGTTGTTGCCTCCGTGTAGCCGGAGAGATGTTATCGGTTGCGGAGC
CCATCTTGACGCGGGGTGTACACCCGACGCAGGTGAGGTAGACTCCTTCA
CGAGTTTATTTCTTCAATTAAATTTTTTCTTGTGTTTCTCTGTTTATCTC
TCCAATATTCGACATAATCATCGCCCATGATGCGCAGCGCCATCATGCTT
ATCGCCCGTCGCAGCATTGTACAGTATGTGTTTCGCTAGGACTCCTGTGC
ACGGGTTTGGTTATTAATGGTTGTTGTCGGATAGTAGAAGCACCCCGTAT
AGCCACCGACGGTGTGGCGAGAGTGAATGGAGATTGACGGGCAGTATGCT
GCACCCAGGTTGCCACGATATTGGGGCATGCCTCGCCGCCGCCTCAGCCT
CAGCACGTCGGGGCTCGCCAAGGGCCTGGAGCCTCTTGCAGGGTGCCCCC
CACCCCCCCCTTGTTCATGGCTCTTCCCTGGTAATGCTTCCCGTTCTTGA
GGCCCTCATCGTTTCAGATGTCTCGCTGCTTCGTATTTCCTAGCCCTTCA
CGTCAGTTGGCGTGTTTTGCCGAGAAAGTTACTCGCTCTCCTTAGATTGC
CTCTCTTTCCAGTTGACCGAGTACGTCGCGCCTGCGGTCATCTCACCTAC
CCTGCGAGGGCGGCTTGTTGCCTCGAGACGAAAAACCAGATACAGATACA
CGCGCTCGGAGACGGATCGCAGCCAGATGGCTTGCGCGCTGTGTCATGAC
CTTCGAAACCGACGTCTCGCGCTGCACGCTAGGTTGTGTTTCCTCTCCGC
TGCGCTTTGCCATGCTTCTTTCATGCCCCTGAAGTGCTTCTTGCGACTGG
TGACCAGCTGCTGTCGTGGCCCGTACGTGGAGGAGGGCGGTCACTTGTCG
ATTGCTTTCTCTCCTTCCCAGCGCGTGACGGTGCATGACACAAAATAAAA
GGGCTGTGGCAGCGTTACCGGCTGGCTTTCTTGCCTCGTCAGCTACGTTA
CGTTGAGCCATGGCATGGCATCACCCGACGCCGCCACGCCTGACACCGCG
CCGCACAACACTACAATACGCCCCACCACACCACGCCACACCGCACCACA
CCACACCACACCACACCACACCCTGGTTTGACCGCTGCCGTGCGTGCTTG
TGCTTGCCCCCGCCCCCTTCGGATTACTCGACCACCGCGAATTATCATCT
ATTTAACTACGGGGTAGATCGTGATGGGCTACGCGCGCGCGCTGCAGACG
GCGCTGGACACCTGCGACGCTCTGGCGGAGACGATCGACGTCGACAACGG
GCCGCAGCTCAAGGAGCTCGTCGACGCCGCGGTCGGTACCAAGTTCTCTC
ACAGGTTTGTGAAGCTGGCTGCTGGTGTTATTGCGGCGATTTGGGTGTCC
TGGAACTGGTGTTCTTGTGAGACGGGGGCGTGGCTTGCCGATCCTGAGCG
TGCTGTGACTTCTTTTTTTGTTGCATTTTTCGCCCTCCCTGCCCCCTCGC
CCCCGTGCAAGAGGTTGCGTCGCAAAATCACAACAGCCAAGCACACTCCG
GACGAGACACGCGCAAGAACACGATGCCGCTTTGATTACGCTTTTGACCA
CAGTCCGCAGGCTGTCCTGCGACAGAGCCTTTGTGATGAACAAAAGCGTA
GTCGAATTTCTCAGGAAAGAGCTGTCGTGAGAGCAACATCGGCGACCACA
ACAAGAAAGAGCAACAACGACCACGACAGCATATCCATAACCGCCGTCAG
CAACGACGACGACGACAACAACAACAACAACAACAACAACAACAACAACA
ACAACATCGGAAGGTCGCGCGTCTCCCGGCTGCCCGCCTTTCAGGTGGGG
CAACAAGCTTGTGTCGATGGCCATCGACGCCGTGAGGCGGGTGAGGACAG
TTGTGGACGGTGGTCGCGTCGAGGTCGACGTCAAGCGCTACGCCAGGGTA
GAGAAGATCCCCGGTGGGGAGATGGAGGACTGCAAGGTGAGTTAGTGAGC
GAGCGAGCGAGTGGGTACACACCGAACGTTGGCGACCACGAGCCCCGGCG
GGCATTGGTCCCTGTTGGTTGCGTAATCACGCGGTCATTTCAATATTGCG
GCGGGGTGTCCTTTACGGCTACTGCTCCTCGCTTCCACTGCCGTCTAGTC
TGGTGCCTCTTCTGCAGTGTGGTGTTCGCTTACGGACAGTTGTCACGAGG
GCCGTCGAGGCGTGTAGCGAGGGTGGAGCCAGGATCCGGCGGTTCAACTT
GCGGATGGACGTGCCATGCCATAAGGCTCCTGTTGCGGCGCGCTCTCTGC
CCCAAGGCCGTTGCCGGCGGCACTGGTTGATTTAGAACATGGTATTGGGA
CAATAAAACCACCCCCCTTCGCAGGGTAGTCGGTCGGCGTACCGACAATT
TGCTCATCGGCTGTCTCGGGGTGTTGATTCCGGGGCATCCCTTCGCCCCC
TGTATAATTTCACCCGTCTCGGTCACGCCCCTCAGACCTCGCGCCGCGAT
CGTTCACCGCGTCGTACGACCCCGGTGCTCAACCGCTGCACTCTCCCCGT
TCGCGGTCACCGATGAAATCGATCCCATCCCCCTGACGAGGAGACGCGAT
CGACTCATAGATCTCGCGCGATTGGTCCATGTCCCTCATCTCCACATACT
TTCGTCGCTTGTCGAGCCTGGTGTAACGCCCCGCCCCCCTTCCCCTCATT
TTTTTTTTTTCTCCTCGTGAGAGCAGGTTTTGGATGGTGTGATGTTCAAC
AAGGACGTGACTCACTCTAAAATGAGGAGAAGGATCGAGAACCCCCGCGT
GCTGCTGCTGGACTGCCCCCTCGAGTACAAGAAGGGAGAGGTGTGCCATC
GTGTTATCTGTTTGTTTTTGACGTCGCCATCTTCGGGTTCTGACTACTGC
CTCGGGCGCTTGGGTTTCTGGGGCGCACGTGTCCACAAGTATTGTTTGCA
ACTATCCCCGTACGCACATCTGGAAATGTGTGCTTTCGTGCTTGAAGCTC
CCATCAGCGAAGGAAGAGGCAAAGCCGATTTCAGGTGTTACTGGAATTTC
TGGTGGGATGTTGGGGTCAATACAACAGGAATTTCTGTGTACTTCATCTG
CATGTAGCTGTGAGGCGTCCCATTGAAACGAAAAGAGAGCTAGGTGTGCG
CGCTCTGCCTGGTTTCAGTAGTTTCTAGAAAACCAGATTTTTTGGGACGA
AAGTGGAAAATAAGATCGAACGGCAACGATATCACGAACACTGCCTTCAA
AAACTTTTTCACATCGCTATCAACACTATGGAGGAGACTGTCATCAACAA
TATCACGAACACTGCCATCCTCAACAGTGGACGAAACTATGCCCACCGAC
ATATGCAGCAACGCAACATAAACAACCACGACGGAGCTTCTCATCGACAG
AATCATGTCAATATCGCATACATCGCTGCAAAACGTGAATTGAATTTCCG
CAGTCCCAGACCAACGTAGAGGTGACGAAGGAAGAGGACTGGAACACCCT
CCTGAGGATGGAGGAGGAGTACATCGAGAACATCTGCGCGCAGATCGTGG
CGTTCCACCCGGACATCGTCATCACCGAGAAGGGCGTCAGTGATCTCGCG
CAGCACTACCTCATGAAGGCTGACATCACCGTAAGTCAACCACCGCTTGT
CATTTCGTCATGATCAGAAAGCCCTGCCTACTCTGAGCCGTCAAGTCAAC
CCTCGGGAATAAATTTGGGGCGTTTCTTGGCTTGTGGGAGGGAATAGGTG
TGAATGTTCGGTTTCGCTACCCGCTGTACGTGCGGTGTATCCATCCATCG
CGCGTCTCGATCTTGAAATATGTTTGCTTCTCTGACTTGATCCCTTGGTC
ATCACAAGAATACACGCAAAGCCTGACATCGCGTCAGACCCACATGGGCT
TGTATCCGGGGGGGCATCGTACCGATTTTAACTACAGCACGAAATTCGCC
CAGCGCAAAGACGACCTTGTTACGTAACACTTCCATCGGTTTCGGTGGAT
GTTTATTTCGCTTGCGCGCTGATTATCCGGTGATTTTTTGTTGTTTAAAC
TTGAACACAGGCATTCCGCCGCCTCCGCAAGACGGATAACAACCGCATCG
CTCGCGCGGTGGGGGCGACGGTGGTGAGCAGGCCCGACGAGATCCAGGAG
TCGGACATCGGCACGGGCTGCGGGCTGTTCGAGGTCCGCAAGATCGGGGA
CGAGTGAGTGACTACAACGTTTGCGAAAGGCACTTGTAGGCTGTGGTAGG
TGTGTCAGCATCTGAGCAAGATTGGGGAGGAGTGAGTCCCTACAGCTGTC
TTCGATGCACATGAAAAGCTTTCGTGGACTACAATGGAGAGGTCCGAAGC
CGAAGGCGCCGGTGGCGTAGGTTGTGAGGGATGCGCGCTGTGGAACGGTT
GGCCTCTTGAATAGCGACCACACCTCATCGACGTGTTTTGTACCACAGCA
GTGCGGTACGTTGCTTGGCCGCACATGAGCCCGGGATGCAGCGTTTACCG
CCTTCGACTTGCTTCTTCCTTTTCTCCTGCCGCAGCGCGAGTTGTGTACT
GTTTATGGCTCCGCGACTTTTCGATGGCTACCTCGGCCTGCTCGGTGTGA
GTCAACCACGGAAAATATTCCTCACAGAAATGTTTCCCCGTGGAAGGGGT
TCCTTGGTGTCCGCCTGACCTGCCGGAACATCTCCAGAGCGAGGTGTTTT
ACCCCTTTGCTTGGCTCGTGCAGCACCGGCGATCGTGTGGTCGCTAGTTT
ATCACCCCCTCGTGTTCGCTGTGCACCCGTTGGTGTCGGGACGGGCCTAA
AGCGACTCCAAAATCCGCTCGCGAGTGGTCGAGAGTGACTGGTAAAGATT
GCGCCAGGGGCGATTGTGGAAGCGACCTAAACACTTGTGCAGGGCGCAAG
TCTGGCGTGCGAGCGTGTATCACATTTGTTCTGCCTCGATAGGCGGAAGG
GAAAGACAAACATGACTGACAAGCGGCAAGTGAAGACAGGCTAAGCCGCG
TTGAATGGCTGCGTAGTTGAGAATTGAGAAACCCTGGCTACACTTTTTTG
AAACACTGTCGTCCAAATATCCACGTTGGGCAGGTACTTTTCGTTCCTGG
AGGGCTGCAAGGATGCCAAGGCGTGCACCGTCCTCCTTCGGGGTGGCAGC
AAAGACGTGCTCAACGAGGTTGAGCGGAACCTGGCAGATGCTATGCAGGC
GCGTGCGTGATATGAACCGTCTTGTCACCTTGGGGAAAAGTTGCTATGAA
GAAAAGGCTGTATTCGATAGAGGCTCGTTTTGGAAAAGAGCGCTGAGTTG
GTGTTTATCCAACACGCACGTCAGCAAGGTGGAAAGGACGACCAAATAGC
ACCAACACTTGAAATCACAGCAGCTTGCGCGTGGTACCCCGTTGCTAGTC
GCTAGACGACGGTCGGTACCAAGGACTAGGACGTGTCGCTGTTCAGACTT
TTTCGTGTTCACGTATGCAAGGTTGCCTTGAGGCAGGGTCGGTATGGGCC
CTGATTTGTTGACCCCTCCATCATACTCTCAACTTGTAGGTATGATCCAA
ACATCGGCGGCATGTAGGGTGGGTGAAACTTTGCCTCACAACGATGGATC
CATCCCTGATAACATCAGGTGGTGCGCAACGTGGTCTTCGAGCCGCGACT
GCTGCCGGGCGGCGGCGCCACGGAGATGGCGGTGTCCCAGGTCCTGTCCA
AGAAGGCACAGGTAGGCGGCACGGCACCCCCTGACCTCTCTACCATCTAC
CACACCACGGAACTCCTGCACGCAGTGAGATAGAACCTCGATGTACATGA
CCCATCCGTCCCCCACTCCGTCCCCCCCCCCCGCTATGGCGTCTGAGAAT
GAGGTTGCGCAGGAACACTGCCCTCCCTTTGAGGTAGATACCATTGCGCT
TTGTTGGCGGGGGGGATGGAGCATGATACAGTTTGCCGTCAGATGGTCGT
TAAATCTGGCCGTCGAGAGCATTAAGCCCGCCCCTTTGGCCTCCATCCTC
GGTGCCCCATGGCGTTTCTCTCTTGTCTCGTCGGTCACATGAAATGTGAT
CATCTCGGTGTTGTGTCGTCGCACGTTGCGTCTCCTTCCCCCCCTCGCCA
TAATCTTGTTACAGGAGGTGGAGGGCGTGCAGCAGTGGGCCTTCAAGGCG
GCCGCTTCTGCGCTCGAGGTCATCCCCCGCACGCTAGCACAGAACTGCGG
GGCTAACGTTGTGCGGGTGCTGACGCAGCTGAGGGTGTGTGGGCGGTTCA
AACGTGTTCGAAGACGTTTTGCAGAAGCTGTCCGCGTCCGTTCTGTTGCA
ATGCCATGTGTGCCAGCACGTGTGCTTCTTTTTTGTCTTTCCCCCACCTT
CTACCCTGTTCTTGGGCCACCCAGAACATTTTTTTTTTCAGTTCAAGTTC
TTAAGTGTGGGTGAGGCCACGGGGCGGAAGGGGGGCCGGCCCTGCCCTTC
ACGAGGGTGAAGTAGCGAATGCGTGCCCCCCAGAGGCACAAGTGCTTGGT
AATTGATGTGTAATACGTTTTGATTTGAGTCCTCCCTTGTTGCATCGCAC
TGCTGTCGGGCCTGCTTTCGATATTTTGAAAAAACAGCCTGCCTTGCGTC
CTGTGCGCGGACCTCGGCTTTTGTCGATGCTCAGCTCTGCACGAAGTCAT
GAGTATTTTGCCGACCTACTGTACGTTCTTGAGCTGCTTTTGGGGTTGAA
ACCGGGCAAAACGACGCGGCCAACTCAGCCAGGGAACATGACTCGTGTGT
AGTTGCCTGACGCTCTTTGTACTGTTTGCGAAACACCTTATCACGTGTCC
AGCTGCAGAGCCATCATCCCCTCATTCTCTCGACCCTGCCCCCTGTCGAC
CGAGTCTCTTTGTCCTGCTTTCGAAACACCTTAATGATTCGTTCGGTCGA
TCAGGCAAAACACGCGAACGAGGCGAAGTGCACATGGGGCATCGACGGCA
CGACGGGGGTCATGACCGACATGAAGGATCTGGGCATCTGGGAACCGTTT
GCCGTCAAGACGCAGACGTACAAGACGGCGGTCGAGGTGCGTTCACGACG
CGACGTGATGGAGCCGAAACGGCCCGTTGGTTTAGAATGAGAACAGCACA
TGTATCGAACATGATCGGTCCGTCGATGGGGAAAGGTCGGAAAGCGGTCG
GCTCATTGATCGAACGAGAGGACAGTCTGGTAACCCGCAAGCCCTGGTGA
CGAGCGCGAGTGAAAAGAAGAGAAAGGGGCAGGCGCACGTTTGTGTGACC
GAGGCAGGAGATGCAGACAGACGTTCCGCAGACAAACAATCGGTTCAGAT
CGCTCTCACGTGTCGCTGTTTCTCTCACTAGGAATGCACACAAGGCCTAG
AGGTCGCTATACGTGAAGATGTAAACTGCGCGAATGCGATGCGCTGTTCG
TACGTGTGCGACCTTGTGCCGTGGTGTACAGACGCGTATACTCACCGCAG
TTTGCTCAGGAACAAGCGGCGAATATTTCGAACTGCAACGACCTTGCCTT
GCAGATGTGCTTTCTTACCACCGCTCACTTGTGCATCTTTCGCGGTGTGT
GTGCCGTCACTCATCCTCGGATCTGTCCTCTGTGTCTCTGTCTTGACTTT
CTGTGTACGTCCCACGGTGTCACAGGCGGCATGCATGATCCTTCGCATAG
ACGACATCGTGTCTGGTATCAAGCAGGGGAAACAGCAGGGATAAGCCGGA
GGTGCGACCCATCGACTCCATCGAGAGAAAGGCTGTGTGTGTACGGTGGG
GTGAGGGCGGGGCAGTTTCGCGGGGGAGGGGGGAAGGCAAGAGTGTAGAG
ATGGGAAATGGAGGTGGGTCTGGTGAATCAGCCGGCCACGCTCAATCCTG
CTCTCCAAACACTTGGCAGCGTGGGCTGACGAACACTGTGTTGAGGTGTT
GCGCCAGTTCCGCGCGGCCTGTGCGTGGCGTGAGGGTCATGCTTTGCTGC
ACAAGCGCTTTGCTTGAAGGAATCACAAGCATGTCTTGCTCTTGAACGGT
GCTTGTCCCGTCAAGAGCGGAAGTAAAGCCGTCCATGAATGAATGGGGAG
GCATCCATGATGGTATCCTGCCAAAGGAAAGCAAACATTTGATTTTGAAG
TGACAGCGGCGGCACTGTAGACGTTGCACGTGAGGGCCGGATTGAGCACA
CGCAACAGCGGCGTGTTCCGAGCAGCAGCGCAACAACAGGGGGGACGGGA
GCCGAGAGATAGCTTGTACACCTACAGGCTGTTAGAGTTGCTCGAATGAG
CGGCCGCTGTCAAGAGAGTCGAGATAGCGGAGGCGCATACCCCAGTTCGG
GCGCGGGCATGTCCTTATTTTTGTTGCGAAGCACCGGCGGAGGTGGTGAC
AAAGGTGGTACTGTTTTGCCTCCGCCTGTGACTAAGGCACTCAAGAGTAC
TGTATTTGCGCGTAGTCCAGGGGGGTGGGGTGGATGTGCGCGGGAGG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:3210114..3222210+

>mRNA_P-fluviatile_contig11.1277.1 ID=mRNA_P-fluviatile_contig11.1277.1|Name=mRNA_P-fluviatile_contig11.1277.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3198bp|location=Sequence derived from alignment at P-fluviatile_contig11:3210114..3222210+ (Porterinema fluviatile SAG_2381)
ATGAGCGCCCCCGTGATGGTTTTGCCCGTCAACACCAAGAGAGAAACCGG
CCGTGCTGCGCAGCTTGGCAACATCTCAGCCGCAAAAGCAGTAGCCGACA
TCATCCGGACAACCCTGGGGCCCAGATGAGCGCCCCCGTGATGGTTTTGC
CCGTCAACACCAAGAGAGAAACCGGCCGTGCTGCGCAGCTTGGCAACATC
TCAGCCGCAAAAGCAGTAGCCGACATCATCCGGACAACCCTGGGGCCCAG
GTCCATGCTGAAGATGCTTCTGGACCCGATGGGCGGCATTGTCATCACAA
ACGACGGCAACTGCATCTTGCGAGAGGTCCATGCTGAAGATGCTTCTGGA
CCCGATGGGCGGCATTGTCATCACAAACGACGGCAACTGCATCTTGCGAG
AGGTGGACGTGGCGCACCCGGCCGCTAAGAGCATGATAGAGCTCAGCCGC
GCGCAGGACGAGGAGGTCGGCGACGGCACCACCTCCGTAATCATCCTCAG
TGGACGTGGCGCACCCGGCCGCTAAGAGCATGATAGAGCTCAGCCGCGCG
CAGGACGAGGAGGTCGGCGACGGCACCACCTCCGTAATCATCCTCACCGG
AGAGATGTTATCGGTTGCGGAGCCCATCTTGACGCGGGGTGTACACCCGA
CGCAGCCGGAGAGATGTTATCGGTTGCGGAGCCCATCTTGACGCGGGGTG
TACACCCGACGCAGATCGTGATGGGCTACGCGCGCGCGCTGCAGACGGCG
CTGGACACCTGCGACGCTCTGGCGGAGACGATCGACGTCGACAACGGGCC
GCAGCTCAAGGAGCTCGTCGACGCCGCGGTCGGTACCAAGTTCTCTCACA
GATCGTGATGGGCTACGCGCGCGCGCTGCAGACGGCGCTGGACACCTGCG
ACGCTCTGGCGGAGACGATCGACGTCGACAACGGGCCGCAGCTCAAGGAG
CTCGTCGACGCCGCGGTCGGTACCAAGTTCTCTCACAGGTGGGGCAACAA
GCTTGTGTCGATGGCCATCGACGCCGTGAGGCGGGTGAGGACAGTTGTGG
ACGGTGGTCGCGTCGAGGTCGACGTCAAGCGCTACGCCAGGGTAGAGAAG
ATCCCCGGTGGGGAGATGGAGGACTGCAAGGTGGGGCAACAAGCTTGTGT
CGATGGCCATCGACGCCGTGAGGCGGGTGAGGACAGTTGTGGACGGTGGT
CGCGTCGAGGTCGACGTCAAGCGCTACGCCAGGGTAGAGAAGATCCCCGG
TGGGGAGATGGAGGACTGCAAGGTTTTGGATGGTGTGATGTTCAACAAGG
ACGTGACTCACTCTAAAATGAGGAGAAGGATCGAGAACCCCCGCGTGCTG
CTGCTGGACTGCCCCCTCGAGTACAAGAAGGGAGAGGTTTTGGATGGTGT
GATGTTCAACAAGGACGTGACTCACTCTAAAATGAGGAGAAGGATCGAGA
ACCCCCGCGTGCTGCTGCTGGACTGCCCCCTCGAGTACAAGAAGGGAGAG
TCCCAGACCAACGTAGAGGTGACGAAGGAAGAGGACTGGAACACCCTCCT
GAGGATGGAGGAGGAGTACATCGAGAACATCTGCGCGCAGATCGTGGCGT
TCCACCCGGACATCGTCATCACCGAGAAGGGCGTCAGTGATCTCGCGCAG
CACTACCTCATGAAGGCTGACATCACCTCCCAGACCAACGTAGAGGTGAC
GAAGGAAGAGGACTGGAACACCCTCCTGAGGATGGAGGAGGAGTACATCG
AGAACATCTGCGCGCAGATCGTGGCGTTCCACCCGGACATCGTCATCACC
GAGAAGGGCGTCAGTGATCTCGCGCAGCACTACCTCATGAAGGCTGACAT
CACCGCATTCCGCCGCCTCCGCAAGACGGATAACAACCGCATCGCTCGCG
CGGTGGGGGCGACGGTGGTGAGCAGGCCCGACGAGATCCAGGAGTCGGAC
ATCGGCACGGGCTGCGGGCTGTTCGAGGTCCGCAAGATCGGGGACGAGCA
TTCCGCCGCCTCCGCAAGACGGATAACAACCGCATCGCTCGCGCGGTGGG
GGCGACGGTGGTGAGCAGGCCCGACGAGATCCAGGAGTCGGACATCGGCA
CGGGCTGCGGGCTGTTCGAGGTCCGCAAGATCGGGGACGAGTACTTTTCG
TTCCTGGAGGGCTGCAAGGATGCCAAGGCGTGCACCGTCCTCCTTCGGGG
TGGCAGCAAAGACGTGCTCAACGAGGTTGAGCGGAACCTGGCAGATGCTA
TGCAGGTACTTTTCGTTCCTGGAGGGCTGCAAGGATGCCAAGGCGTGCAC
CGTCCTCCTTCGGGGTGGCAGCAAAGACGTGCTCAACGAGGTTGAGCGGA
ACCTGGCAGATGCTATGCAGGTGGTGCGCAACGTGGTCTTCGAGCCGCGA
CTGCTGCCGGGCGGCGGCGCCACGGAGATGGCGGTGTCCCAGGTCCTGTC
CAAGAAGGCACAGGTGGTGCGCAACGTGGTCTTCGAGCCGCGACTGCTGC
CGGGCGGCGGCGCCACGGAGATGGCGGTGTCCCAGGTCCTGTCCAAGAAG
GCACAGGAGGTGGAGGGCGTGCAGCAGTGGGCCTTCAAGGCGGCCGCTTC
TGCGCTCGAGGTCATCCCCCGCACGCTAGCACAGAACTGCGGGGCTAACG
TTGTGCGGGTGCTGACGCAGCTGAGGGAGGTGGAGGGCGTGCAGCAGTGG
GCCTTCAAGGCGGCCGCTTCTGCGCTCGAGGTCATCCCCCGCACGCTAGC
ACAGAACTGCGGGGCTAACGTTGTGCGGGTGCTGACGCAGCTGAGGGCAA
AACACGCGAACGAGGCGAAGTGCACATGGGGCATCGACGGCACGACGGGG
GTCATGACCGACATGAAGGATCTGGGCATCTGGGAACCGTTTGCCGTCAA
GACGCAGACGTACAAGACGGCGGTCGAGGCAAAACACGCGAACGAGGCGA
AGTGCACATGGGGCATCGACGGCACGACGGGGGTCATGACCGACATGAAG
GATCTGGGCATCTGGGAACCGTTTGCCGTCAAGACGCAGACGTACAAGAC
GGCGGTCGAGGCGGCATGCATGATCCTTCGCATAGACGACATCGTGTCTG
GTATCAAGCAGGGGAAACAGCAGGGATAAGCGGCATGCATGATCCTTCGC
ATAGACGACATCGTGTCTGGTATCAAGCAGGGGAAACAGCAGGGATAA
back to top