mRNA_P-fluviatile_contig11.1272.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1272.1
Unique NamemRNA_P-fluviatile_contig11.1272.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A6H5KZR8_9PHAE (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZR8_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 2.140e-180
Identity = 258/294 (87.76%), Postives = 268/294 (91.16%), Query Frame = 1 
Query:    1 MSAEEGTNPP--AEAAAP-IGEMPAEEPAVDLAKQNEQTVAQTNAINEDVKATQAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQLGSITLPDTGSEPMVTLLYRPGHYDVLYP 873
            MS E+ T  P  A +AAP  GE  A + +VDLAKQNEQTV Q NAIN  +KATQ KVG KE+V+ALLPEYEGNPKPGFRKGVQDL +RYSALRRVRGDGNCFYRSFLFGYLERLLQGIK  GDANTKAMLELSRLRQVVH+SKAALIALGYEEVALDDFWQTFLQELDALPNMEM QLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEH VDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF GQLGSITLPDTG+E MVTLLYRPGHYDVLYP
Sbjct:    1 MSEEKDTTAPPAASSAAPSTGETAAADSSVDLAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKGVGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFSGQLGSITLPDTGAEAMVTLLYRPGHYDVLYP 294
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A7S2SU36_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU36_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.060e-83
Identity = 133/265 (50.19%), Postives = 176/265 (66.42%), Query Frame = 1 
Query:  109 VAQTNAINEDVKATQAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFL--------EHAVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF-QGQLGSITLPDTGSEPMVTLLYRPGHYDVLYPA 876
            ++Q   I  D+ A   KVG  E V+ L  EY GNP+PGF  G++ LA RYSALRRVRGDGNCFYR FLFGYLE+L   I+    A   A  E  R  Q   +SK  L+++GY+E+A++ FW+  ++ L+ LP+ +++ LE  F+EE G  EY+VWYCR + +G++K N D FLPF+           VD+ ++C+REVEPMG+ECE +QIM LCE +   V IEYLDG    QG+L   T PD G+ P +TLLYRPGHYD+LYPA
Sbjct:    1 MSQLGEIERDIAAKSLKVGVPEPVQGLAGEYAGNPRPGFLPGIEYLASRYSALRRVRGDGNCFYRCFLFGYLEQL---IRQRDTAVEDAERERKRALQAARQSKDDLVSVGYDEMAIETFWEVLVEALETLPSTDLATLEKQFQEENGDAEYMVWYCRAIAAGYMKRNPDTFLPFILALDDAAGTAVVDINEYCRREVEPMGRECEAVQIMALCEAMQIGVAIEYLDGALLDQGRLSCPTFPD-GAAPQLTLLYRPGHYDILYPA 261
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: W7TH65_9STRA (Ubiquitinyl hydrolase 1 n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH65_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.330e-74
Identity = 134/274 (48.91%), Postives = 171/274 (62.41%), Query Frame = 1 
Query:  106 TVAQTNAINEDVKATQAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQ-GIKSPGDANTKA-----------MLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAV-DMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQ--GQLGSITLPDT---GSEP--MVTLLYRPGHYDVL 867
            T+AQ   I+  + A+Q  VGP E    LL  Y+ NP+ GF +GV+DLA RY+ +RR+R DGNCFYR+FLF YL  L++ GI+       K              E  R  Q V +SKA L+ +GYEEVA+D FW+ F++EL+ALP+  +S LE  F E  G   Y+VWYCR+LTSG+LK + + +  FL+ +  DM DFC REVEP GKECEQ+QIM L   L   V+IEYLDG+     GQL    LPD    G E    VTLLYRPGHYD+L
Sbjct:   41 TIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGGGKGRKRGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEGVPVTLLYRPGHYDLL 314
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A835ZBB3_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB3_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.870e-67
Identity = 126/268 (47.01%), Postives = 161/268 (60.07%), Query Frame = 1 
Query:  100 EQTVAQTNAINEDVKATQAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQV-----VHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFL-EHAVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQLGSITLP---DTGSEPMVTLLYRPGHYDVLYPA 876
            E TVAQ NAI E++K  Q  VG      AL PEY  N KPGF KG++ L++RY+ LR VRGDGNCFYR+  F  LE L+  ++S GDA      +    R V     + ES   L++LGYEEV+ D F    L+ L+ +       LE  F E+ G  EYI+W+CR+LTS F+K +  RF  FL    VD   FC REVEP+G ECEQ+QI+ LCE L+  V+IEYL+G+DF    G   +P   D   E    LL+RPGHYD+LY A
Sbjct:   23 EATVAQQNAIQEEIKKAQPLVGKAVSPSALSPEYTDNVKPGFLKGIEYLSKRYARLRPVRGDGNCFYRALTFALLENLVLKLRS-GDAAAAQAAKAEAQRLVDKGKPMKESCQTLLSLGYEEVSFDMFSAELLEALEGIETTTPESLEAKFNEDGGSGEYIMWFCRLLTSAFIKSHPSRFESFLIGDTVDT--FCAREVEPLGVECEQLQIIALCEQLDIGVRIEYLNGEDFDASKGLDAVPVNMDGRQEAAAELLFRPGHYDILYTA 287
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A7S1ADL7_NOCSC (Ubiquitinyl hydrolase 1 n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ADL7_NOCSC)

HSP 1 Score: 216 bits (550), Expect = 9.120e-66
Identity = 127/273 (46.52%), Postives = 165/273 (60.44%), Query Frame = 1 
Query:   91 KQNEQTVAQTNAINEDVKATQAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQ----------GIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAV--DMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQLGSITLPDTGSEPMVTLLYRPGHYDVLYP 873
            +QN  T  Q  +I   ++ TQA +G KE    L   Y+ NP   FR G+ DL  RYS +RRVRGDGNCFYRSFLFGYLE+LL             +S  +       EL R+   +  SK  L+A+GY+E A+D FW   ++ ++ALP      +   F EE G  EY+VWYCR L++GFLK + +RF+PF+  A   D+  FC  EVEPM KECEQ+QI+ L E+L   V+IEYLDG+   G   +   PD G  P +TLLYRPGHYD+LYP
Sbjct:   10 EQNVLTEKQVESITAQIR-TQALIGIKESPNVLDAVYQDNPLE-FRAGIADLTARYS-MRRVRGDGNCFYRSFLFGYLEQLLSQQRQHEAALAAQESAPEGEDAWCPELQRVVARLRGSKLDLVAVGYQESAIDVFWGEIVEFVEALPTHTPESILEQFNEENGGAEYMVWYCRALSAGFLKADPERFMPFILGANYGDIASFCAAEVEPMYKECEQVQIIALSEYLGVGVRIEYLDGRS-NGGASTHVFPD-GVHPQLTLLYRPGHYDLLYP 277
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A2D4CBL9_PYTIN (Ubiquitinyl hydrolase 1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBL9_PYTIN)

HSP 1 Score: 215 bits (548), Expect = 9.850e-66
Identity = 117/247 (47.37%), Postives = 154/247 (62.35%), Query Frame = 1 
Query:  160 VGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEH---AVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQ------LGSITLPDTGSEPMVTLLYRPGHYDVLYP 873
            VG +  V  L  E+EGN  P F  G+  L   Y A+RRVR DGNCF+R F+F   E+L+   +   DA   A L L+R++  + +SKA L+A+GY EVA+D FW+TF+  LDA+     S+L  +F  E G  EY+VWY R+LT+G+LK N+++F PF+E     + ++ FC  EVEPMGKEC+Q Q++ L E L   VKIEYLDG   +GQ       GS   P   S   V LLYRPGHYDVLYP
Sbjct:   10 VGERAPVLELRKEFEGNAXPNFLHGITALDRHYEAMRRVRRDGNCFFRGFIFALCEQLVS--RDDADAEKAAAL-LARIQNTIRKSKAELVAIGYXEVAIDTFWETFVXYLDAMETRTHSELVXDFGTEGGESEYLVWYMRLLTAGYLKRNSEQFQPFIEGLHPGLSVEQFCAAEVEPMGKECDQPQVIALTEALQVGVKIEYLDGNAAEGQELQHYVCGSS--PSGESSIHVHLLYRPGHYDVLYP 251
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: W2QGG4_PHYPN (Ubiquitinyl hydrolase 1 n=8 Tax=Phytophthora TaxID=4783 RepID=W2QGG4_PHYPN)

HSP 1 Score: 211 bits (536), Expect = 1.000e-63
Identity = 113/239 (47.28%), Postives = 151/239 (63.18%), Query Frame = 1 
Query:  187 LLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAVDMQ---DFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDG-----QDFQGQLGSITLP-DTGSEPM-VTLLYRPGHYDVLYP 873
            L  EY GN  P F  G+  L  RY ALRRVRGDGNCF+R F+F   E+LL    + G+ +  A+   SR++  +  SK+ L+A+GY +VA+D FW+TF+  L A+     ++L  +F+ E G  EY+VWY R+LT+G++K NA+ F PF++     Q    FC  EVEPMGKEC+Q QI  L E L   VKIEYLDG     +D Q  + S T+   T  EP+ +TLLYRPGHYD+LYP
Sbjct:   28 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALR--SRIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGPGEDLQSYVCSPTVEATTQQEPVSITLLYRPGHYDILYP 264
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: A0A8K1CBZ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBZ9_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 4.730e-63
Identity = 108/237 (45.57%), Postives = 145/237 (61.18%), Query Frame = 1 
Query:  187 LLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEH---AVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDG-----QDFQGQLGSITLPDTGSEPMVTLLYRPGHYDVLYP 873
            L  EY GN  P F  G++ L + Y  +RRVRGDGNCF+R+F+F   E+LL   +    A    +  L ++RQ    SKA LIA+GY EVA+D FW+TF+  L+A+      +L  +F+ E G CEY+VWY R+LT+G LK +A++F PF+E     + ++ FC  EVEPMGKEC+Q QI  L E L   VKIEYLDG     QD Q  +       +     + +LYRPGHYD+LYP
Sbjct:   31 LKAEYLGNANPNFLHGIEALNKHYEGMRRVRGDGNCFFRAFIFALCEQLLTNKEDVAAATALRLRILDKIRQ----SKAELIAIGYSEVAIDAFWETFVDYLEAMETRTHDELVQDFQTEGGECEYLVWYARLLTAGHLKRHAEQFQPFIEGLFPGLTVEQFCAAEVEPMGKECDQPQITALTEALQVRVKIEYLDGSTTAEQDLQSYICGTNAEGSEDSINIHVLYRPGHYDILYP 263
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: H3H1C1_PHYRM (Ubiquitinyl hydrolase 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1C1_PHYRM)

HSP 1 Score: 208 bits (529), Expect = 7.400e-63
Identity = 109/236 (46.19%), Postives = 147/236 (62.29%), Query Frame = 1 
Query:  187 LLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAVDMQ---DFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQ-LGSITLPDTGSEPMVTLLYRPGHYDVLYPAMA 882
            L  EY GN    F  G++ L  RY ALRRVRGDGNCF+R F+F   ERLL        A  +A+ +  R+++ + +SK+ L+A+GY +VA+D FW+TF+  L A+ +   ++L  +F+ E G  EY+VWY R+LT+G++K NA+ + PF++     Q    FC  EVEPMGKEC+Q QI  L E L   VKIEYLDG    G+ L S     T     +TLLYRPGHYD+LYP  A
Sbjct:   27 LKAEYVGNANANFMHGIESLNGRYEALRRVRGDGNCFFRGFIFALCERLLPS------AGNEALRD--RIQRTIQQSKSELVAIGYSDVAIDAFWETFVDYLAAMESRSHAELVQDFQTEGGEAEYLVWYMRLLTAGYMKKNAETYQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGPGEELQSYVCSGTEEPVAITLLYRPGHYDILYPREA 254
[Close]
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Match: M4C1S8_HYAAE (Ubiquitinyl hydrolase 1 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1S8_HYAAE)

HSP 1 Score: 208 bits (529), Expect = 1.070e-62
Identity = 109/237 (45.99%), Postives = 147/237 (62.03%), Query Frame = 1 
Query:  187 LLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEEVALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLEHAVDMQ---DFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDFQGQ------LGSITLPDTGSEPMVTLLYRPGHYDVLY 870
            L PEY GN    F  G++ L  RY ALRRVRGDGNCF+RSF+F   E LL    S G  ++ A L   R++  + +SK+ L+A+GY +VA+D FW+TF+  L A+     ++L  +F+ E G  EY+VWY R+LT+G++K NA+RF PF++     Q    FC  EVEPMGKEC+Q QI  L E L   VKIEYLDG    G+        ++   +  +   +TLLYRPGHYD+LY
Sbjct:   27 LKPEYVGNVNGNFMHGIESLDTRYGALRRVRGDGNCFFRSFIFTLCEHLLP---SQGAEDSNAALRC-RIQDKIQKSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSYAELVQDFQTEGGEAEYLVWYMRLLTAGYMKKNAERFQPFIDGPYPGQTVAQFCATEVEPMGKECDQPQIAALTEALEVGVKIEYLDGSAGAGEPLQSYVCSTVDATERQAPVFITLLYRPGHYDILY 259
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZR8_9PHAE2.140e-18087.76Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SU36_9STRA1.060e-8350.19Ubiquitinyl hydrolase 1 n=1 Tax=Rhizochromulina ma... [more]
W7TH65_9STRA5.330e-7448.91Ubiquitinyl hydrolase 1 n=4 Tax=Monodopsidaceae Ta... [more]
A0A835ZBB3_9STRA1.870e-6747.01Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S1ADL7_NOCSC9.120e-6646.52Ubiquitinyl hydrolase 1 n=1 Tax=Noctiluca scintill... [more]
A0A2D4CBL9_PYTIN9.850e-6647.37Ubiquitinyl hydrolase 1 n=1 Tax=Pythium insidiosum... [more]
W2QGG4_PHYPN1.000e-6347.28Ubiquitinyl hydrolase 1 n=8 Tax=Phytophthora TaxID... [more]
A0A8K1CBZ9_PYTOL4.730e-6345.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3H1C1_PHYRM7.400e-6346.19Ubiquitinyl hydrolase 1 n=1 Tax=Phytophthora ramor... [more]
M4C1S8_HYAAE1.070e-6245.99Ubiquitinyl hydrolase 1 n=1 Tax=Hyaloperonospora a... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:3171803..3179212 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score521.9
Seed ortholog evalue1.9e-145
Seed eggNOG ortholog2880.D8LU52
Preferred nameOTUB1
KEGG koko:K09602,ko:K09603
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006282,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009892,GO:0009987,GO:0010033,GO:0010605,GO:0010639,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0019784,GO:0019899,GO:0031056,GO:0031057,GO:0031323,GO:0031324,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031625,GO:0031974,GO:0031981,GO:0032182,GO:0032268,GO:0032269,GO:0033043,GO:0033044,GO:0033182,GO:0033183,GO:0033554,GO:0034097,GO:0035871,GO:0036211,GO:0036459,GO:0042221,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045738,GO:0045934,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051716,GO:0060255,GO:0065007,GO:0070011,GO:0070013,GO:0070536,GO:0070555,GO:0070646,GO:0070647,GO:0070887,GO:0071108,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0101005,GO:0140096,GO:1900044,GO:1900045,GO:1901314,GO:1901315,GO:1901564,GO:1902275,GO:1902914,GO:1902915,GO:1903320,GO:1903321,GO:1905268,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001251
EggNOG free text desc.NEDD8-specific protease activity
EggNOG OGsKOG3991@1,KOG3991@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase C65, otubain
Ec32 orthologEc-16_000260.1
Exons8
Model size888
Cds size888
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1272.1prot_P-fluviatile_contig11.1272.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 3171803..3179212 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815477.171166-CDS-P-fluviatile_contig11:3171802..31718451622815477.171166-CDS-P-fluviatile_contig11:3171802..3171845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3171803..3171845 -
1693561990.6653404-CDS-P-fluviatile_contig11:3171802..31718451693561990.6653404-CDS-P-fluviatile_contig11:3171802..3171845Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3171803..3171845 -
1622815477.1838138-CDS-P-fluviatile_contig11:3173108..31732481622815477.1838138-CDS-P-fluviatile_contig11:3173108..3173248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3173109..3173248 -
1693561991.3200104-CDS-P-fluviatile_contig11:3173108..31732481693561991.3200104-CDS-P-fluviatile_contig11:3173108..3173248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3173109..3173248 -
1622815477.1958704-CDS-P-fluviatile_contig11:3174498..31745831622815477.1958704-CDS-P-fluviatile_contig11:3174498..3174583Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3174499..3174583 -
1693561991.677944-CDS-P-fluviatile_contig11:3174498..31745831693561991.677944-CDS-P-fluviatile_contig11:3174498..3174583Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3174499..3174583 -
1622815477.2074547-CDS-P-fluviatile_contig11:3175066..31751581622815477.2074547-CDS-P-fluviatile_contig11:3175066..3175158Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3175067..3175158 -
1693561991.6950405-CDS-P-fluviatile_contig11:3175066..31751581693561991.6950405-CDS-P-fluviatile_contig11:3175066..3175158Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3175067..3175158 -
1622815477.2178268-CDS-P-fluviatile_contig11:3176041..31761531622815477.2178268-CDS-P-fluviatile_contig11:3176041..3176153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3176042..3176153 -
1693561991.7041337-CDS-P-fluviatile_contig11:3176041..31761531693561991.7041337-CDS-P-fluviatile_contig11:3176041..3176153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3176042..3176153 -
1622815477.2284389-CDS-P-fluviatile_contig11:3177049..31772131622815477.2284389-CDS-P-fluviatile_contig11:3177049..3177213Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3177050..3177213 -
1693561991.7138476-CDS-P-fluviatile_contig11:3177049..31772131693561991.7138476-CDS-P-fluviatile_contig11:3177049..3177213Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3177050..3177213 -
1622815477.239071-CDS-P-fluviatile_contig11:3177795..31778941622815477.239071-CDS-P-fluviatile_contig11:3177795..3177894Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3177796..3177894 -
1693561991.724377-CDS-P-fluviatile_contig11:3177795..31778941693561991.724377-CDS-P-fluviatile_contig11:3177795..3177894Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3177796..3177894 -
1622815477.2526686-CDS-P-fluviatile_contig11:3179059..31792121622815477.2526686-CDS-P-fluviatile_contig11:3179059..3179212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3179060..3179212 -
1693561991.7377467-CDS-P-fluviatile_contig11:3179059..31792121693561991.7377467-CDS-P-fluviatile_contig11:3179059..3179212Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 3179060..3179212 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1272.1

>prot_P-fluviatile_contig11.1272.1 ID=prot_P-fluviatile_contig11.1272.1|Name=mRNA_P-fluviatile_contig11.1272.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=296bp
MSAEEGTNPPAEAAAPIGEMPAEEPAVDLAKQNEQTVAQTNAINEDVKAT
QAKVGPKEDVEALLPEYEGNPKPGFRKGVQDLAERYSALRRVRGDGNCFY
RSFLFGYLERLLQGIKSPGDANTKAMLELSRLRQVVHESKAALIALGYEE
VALDDFWQTFLQELDALPNMEMSQLEINFREEAGPCEYIVWYCRMLTSGF
LKLNADRFLPFLEHAVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVK
IEYLDGQDFQGQLGSITLPDTGSEPMVTLLYRPGHYDVLYPAMAP*
back to top

mRNA from alignment at P-fluviatile_contig11:3171803..3179212-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1272.1 ID=mRNA_P-fluviatile_contig11.1272.1|Name=mRNA_P-fluviatile_contig11.1272.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7410bp|location=Sequence derived from alignment at P-fluviatile_contig11:3171803..3179212- (Porterinema fluviatile SAG_2381)
ATGTCTGCAGAGGAAGGAACCAACCCACCAGCCGAAGCTGCGGCACCCAT
TGGGGAGATGCCTGCAGAGGAACCTGCCGTGGACCTGGCCAAACAAAACG
AGCAAACCGTGGCTCAAACGAACGCCATCAATGAAGATGTCAAAGCGACA
CAGGTGTGTTGAGTTCGAACTCAAGAACCAATAGTGCGTGCAACATTCGA
TATCCTCTCGATATAGGTCGAAGAGGCACCGAACTACTACCTCCACAGCA
ACGATAAAGGATACTACCGCAGCGATTTCTCTCGGTGTCTCGGTATTGGT
ATACTGATTGCAATATTTGCCTGCCGTATTGGCAACCCGATTCGGGTTCA
CATCCAATATACCGGAGCGACTTCGTGTGCCTATCGCATCCAGTGGGGTG
GCCTGATTTCCAGCGCTCGAATACTCCTCGGGATGTAAGAAGCTCCAGCA
CTGAGCCATAAAGCTTCTCGGCGTCGCGAATATCGCTCTGCGTGGGTCGT
GCAGAACGCAGCATTTGCCCTCTGACTACTTGCAGATCCAGCAAAACTCG
GTTTGTTAACAATCCAGCGGCAGGCAACAAGCAGCGAGTTCGTCGGCTCG
TGATGATCCGGGGGGAGGAGGTGGGAGGGGGTGTACTCATAGTCGTGCAT
GCCGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGAACGGA
GCACGCCGGGTTCTCACGGGACCAGGCTCTCACACCACCAAGCGCGAAGC
GCCGTGAGGTATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAA
GGGTGTTCGGCATCTTGTGCTTACTTCCTTGCATACGGATGACAGCTGCG
TATGGCTTAATTTATTTTCTGGTGCTTCCACTTCCAGAGACAGTTGCAAG
CACTGTGTAACTGCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTG
CGATCATCCCCCTTGCGCGGAGTGAGGGTTTTCCACTCCGCACAACATGA
TCTTCTCGACCACCATTATGGTTACCGCCAAAAAAAACAGAGGAAAAAAA
AAGACGATAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTAC
AACGTCGTTGCCAAGCGACGAAAACCCAATCTCGATGGCAAACACCGAGG
TGAGAGCCAGCGGGAGGGGACAGGTGGGAGGGGGGGGGGGGGGGCAAGGT
AGAGAGGGGGCAACAGGTCTGTCTTGCAACTTCTCGGCCGGAAAGTCACC
CCAATCAAACGTAGGGTGTGCGACCGAGCTAATCGCCGTTGTCGCGTCCC
CCTGTCAAATTGCAACAGGCGAAAGTCGGCCCGAAAGAGGACGTGGAGGC
TCTGCTGCCGGAGTATGAGGGGAACCCCAAGCCAGGGTTTAGGAAGGGGG
TGCAAGACTTGGCCGAGGTACATGATCAACCAATTTTGTTTCGAAAGGGT
GGCACAAGGAATTGGGGGAAGCAGGAAGGGGCAGGGAGGGGGTATTTTTG
GAGCTAGGCAACTCGACAGTCGGCGAGACCTCAAACTCTCAAATTCTATG
CTTACATCCGTCCTCACACCCTTCGCCTCCTTCGAGACGACATCAGGGAC
GTGTTTCGGACGTTTTCTCTGGACCAGGAAGAAGTGGGAACGGGGTAGGG
CAGGGGGAGAAGATAACCCCTCACGTCGCCTCACATTTTTTGCAAGAACC
GTTGGTTTCGTTCGACCCACGGGACCAGAGGACGCAGCGGCAGCGGCAGC
AACGGTGCTGACGAGCTCAGGGACATGACCACGGACTAGTAGAAGCCGCA
CACAGCACACAAGCCGCGCCCCCTTGGCCGGCTCTCTCTTGAACAACATG
CTGCCGCTGCCGTCGTCGCCGCTGCTGCTGCGCTGTGCGCGACGCACCAG
CCGAAGACAAGGAAGCCACAACACAACCCAGCGCAACACACCAAAACAAA
TACTTGCCGTTCATTTATTCCCCTTTCCAATCGGGTGGCTTTCCTGCAGC
GCTATTCAGCCCTCCGGCGCGTGAGGGGTGACGGCAACTGCTTTTACCGC
TCCTTCCTCTTCGGGTACCTGGAGCGACTGCTGCAGGGCATCAAGAGCCC
CGGCGACGCCAACACGAAGGCCATGCTGGAGCTCAGCCGGCTCCGGCAGG
TGGTTCACGAAAGGTGCATTGTGGTCCGCTCCGCCGCGGCTGTCGCGGCT
GCTCGTCGACGTTGTGTTGTGTTCTGTTGTTTGCTGCGTGTTGTTGTGGT
GGGTGGAGATGGCTGGGGTGGTTGCTGTTGTGGTCGTCATTGTGAAGATG
ACTGGTTTTGCGTTGTTCGTGTGCCCTTTTCCCAGCGATATCATCCTCTC
TCGTTGGTTTACATTCCGCACCAGCTACGAGCTTTGGGACTTTTTTGGAT
GGGGGGGGGGATCCAACGCTCATTGACGCAGCAGGATGTGGCGCTTTCTC
CGTCTAGTGTCTGTCTCCGCGTCCTCAGGCCTCACCAAAAGCACTTGAAT
GTTGCTGGCGTCGATCGGCAGCTTCATCGTCCACGAATGATGATGCACAA
TGTTGATTCGTCCTCGGGTTCGCCTTTTTTTTCCTGTTTCGACCGCGACC
GGCCGCGGCGGACGTGTTCGCTCAGAGTGTTCGTCGACGTTTTCGTTGGA
CGCTTTGTTGTCCTCTATGCGTCGGACATGCACGCGTGGGAGTTTGGCGC
TGCGGCGCCGGCAGCCGACAGGCCGGTAGCAGAGATCGACGTTGCCGCTT
CGTGCCTTCCCAAAACCTTGCCGCTGCTGCTGTCGTGCTGTTGTTGTGCC
TCCTCGGCCGCCAGAAGTTGTGATGCTGACGAATGGGTTACCGCGGCGGC
GCGGGGTAGAGGTCGATTGTTCGGCTTTGTTTAGTTTTGTTGGGTCGTTG
AGGAACATTGCATTGCGTTGTGTTGTGGATTTGTGTTCGTGTGCTGTCTG
TCGTCGCTTGTTCGCAAGGTGTTGATCTGTTCGTCTGTGCTTTTTGCTGC
TGCTTCTCCCGCTAATGCTGCTGTTTCGCCTTCTGTCGCTGCTGCTGGTG
TTTTTACAGCAAAGCCGCTTTGATAGCCCTGGGGTACGAGGAAGTCGCCC
TCGACGACTTTTGGCAGACCTTTTTGCAGGAGTTGGACGCTCTGCCCAAC
ATGGAGATGAGTCAGCTCGAGGTGCGGACGCACAGGATACCCCACTCGCC
TCTTCCCACGACCTTATCAGCACTCGCGTGTGTGACGATTTTCCACCAAG
ACGGCCCCCCGAGTAGCACGCCCTTCACCCCACCCGCCGCGTGTGCTAAC
CGGGGCAGCACTGGACACTCTCGAACGGCCGAAAAACAGAACACAATGTG
TAGGTCAATGTCTGCGTCATGGAGCCTTCTATTGCTTGATATTCCAACAG
TATCCTCCCAAGCCCTTCCTTGAAATACGGCGCTGCTGCCAGCTAACCCC
TGAGATTCTATACGTTGCAGCAAGCAGCATACACGCTGCACACCGCGTGG
GAAACGATGCACGTGGAGACCTCCGGAAACCTGTCTTGACATTTCTTTGT
GACTGGAGATCCTTTCCACGACAGTCCGGGGAGGGTGCTGTCGGGTGTCA
TGCCCAAGCGCCGCTTGCTATGGGCTTGATCAACTAGCCGACATTCACTT
TACGACGAATGAAGAGCAAGGGAACGGAAGGAACAAGGTCGCTCGTTACT
GTTGGCGGCGGTGGCGGTGCGACTCGACGAAGGCGGTACTAGGTTTCCGT
GTCCCAGGCCAGGTGCCGCTCGATGAGGATGGGTGGTCACCGCCCGCAGT
TTGGTGTCCGTGATCCCACCGAGTTTGCAAGTGCGTGGTCTCACGTTTTC
ACGGTTGCAGCCCTCTCTCTTGAAGCGTTTACCTCGATCTCTTTTCAGAA
GATATTCAACTCTTGCTCTATCTCCTTCCCTCCCTGCCCTCACCTCCTCC
CTCTCTACTTACCCTTGCGCTGTCTCCCCGCGTGTTCTATTACTTGCGGT
TGTATGCCTTGTCCCAAATATTCTTCTCCCGCGGGAGACGGACTGGACTG
TCAGATTAATTTCCGAGAAGAAGCGGGGCCGTGCGAGTACATCGTCTGGT
ATTGCAGGATGCTGACCAGCGGCTTCCTCAAGCTCAATGCCGACAGGTGG
AGGGTTGACCGGCACGACGTGGCCACGCTTGCTCACACAATTCGTTTCAC
ACACATGTCATACAACGCAACCTCAGGAATGACGACCTCTCCTTGTTTGC
CTCTGCTCAGCCTGGCTTATTTTGATTCTTCAGACGATGTTTCTTCCACA
GCAGTGATAAGCTTTGAATTGCTCTAGTTAGGTGGTAGCGCGAAGCGCCG
ATAACCTTGCATGAATTTCTAATTAATCATCCAACACGATGGCTCAAGAT
CGGCCGTTTCAGGCGTGCATCGCGGCGCGCGCGTGTGTTTGTTTGTCGAT
GTGCTCGCGGAGACCGATTCCGCCCTCCCCGCACCACGACCTTGCTCAGA
GCTCTGTTTGTTCCGTCGTATAATTGCTCTCCCTTCTTCCCGCTTGATAG
CTGCGTGCTCAAATTTGTTTCGGTGTTGCCGCCGTCGATCTTGCCCACCC
ACCCGGCGGTCAAACATGCTTGTCAAAAGATTCCTGCCATTTCTGGAGCA
TGCGGTGGACATGCAGGACTTTTGTCAGCGGGAAGTGGAGCCCATGGGCA
AGGAATGCGAACAGGTGTGCTGGCAGAAGAAGGGGGGGTGCTGGTACAAC
AAGCTCGCTTGTCCTCGACCTCAAATAGACTTCAGTCGGCAGGAAGCAGG
GGGCGTATTCATGTTTTGCATGCCTTAGTTGTTAGACCATTGACCACGCG
TCCTCGAGAGGACGGAGCGTTGTTCGGCAGGAAGCGGGGGTGCTTTAATC
TTCACTCTGTTCTTGGCGGAAAGTAAAGTTGTTTGTGCTTATGTTTCTAG
TTACTCAGCAGAAAAATGAAGTCGAGCAAAGTTGGGAATCGTACCAATCA
CCAGAAAACATCACCTCGTCTCCAGTCCGAGGTGGTAAAAAAAAAAAAAA
CGAGCGATGTTACAACAGCAGATTGAATGTCGACCGTGAGCGCGCTTCCC
TGCACTCTTTGCCTGGTTGAGCGAATCTGAAGGCTGTTCTCGCTATGTGC
TTGTCTTCTTGTGTTTGTAGCGCAAGTGCTGATTCACGAAATGAGTCGGG
CCAGGGCCAAGAAGTAGTGCGATGCCGCGCGAAATGAGTGCACGGGCGCG
GGGCATTGGAGCAACCGTCCTCGAGTTCATCGGGAAGGCCGTGGCGGGAA
GGGACGATATGGAGCGTGCCTTGAGGCCACCCCCTCGTGCTTCATCGATG
GCTCCGTCCACGCCAACCTCGGAAGGCCGTGGAAATATCCGCCGCACACT
AGCCGACAAACCCGATCCGGGTCACAGAACCGTAGGCTTCCCCTTCACAC
ACCGTTTAGTATTCCATGTGAATTCCCTCATTTCACGCAAATCTGTCCCG
CCTGGAAAAAGCTTGGTTCAAGCGAAACTGAATATCCTCAAAAATGAGTT
ACACGATTTTTCCAGAGCCTGAGGGCCTCTGATATGTGGAGGTGTAGAGA
GCGATGATGTGTCATCCTACGGGAGCCTCCATGGGATATGCATGGACGTT
GGTGTGTAAATGACGCCCTGCAGTAACACAATCAGCGAAAAGGTTGCCGC
TCGATGGTACGTTTCCTTGGTCTCCTTCGTCTCGCCTCTTTTCGGCGGTC
GAGTTGTAACAGCTTGGTGAGGGATCTTGCCACCTCTTTCAGAAGACCCC
AGACCCCGTGGTCTGGAAGATATGCTGGAGCCGGTACTTGAAGATGACAG
CAAATCACACGCGGGTAAAAGACGCACGTGTTCGTCGTCCTCTTCGCATC
CGTCATTGTTTACTACATTCTTGTGCGGGTGCGTGGTGCGTTTTTTGCGG
GCATACCAACGTAGATCCAGATCATGGGTCTGTGCGAGCACCTCAACACC
CCCGTGAAGATAGAATACTTGGATGGTCAGGACTTCCAGGGGCAGCTGGG
AAGCATCACTCTCCCGGACACGGGGTCGGAACCCATGGTCACGCTGCTGT
ACAGGTACGATCAACCCCGCTTTGAGAGCAGCAACTTTGAGGACACTCTC
CGCCGTATAGACACTTCCCGTTTCTGAAGCAGGGGACCGGATGATTGACC
TCGTACTGAATCTCGAGGACGCCCACCCCCGCGCAGAGTTCACATCAAGA
TTGAAACGGAACGACTGTGCTTCCTTAAGTGGGAATGACTGTGTTTGCGT
TCCCGTTTTTTCTGGCGAGTGTTGCCCCTTTTTGGTACAACTACTGTACA
CTACACGTTTCGGTGTAAGTATTTAATGTGTTATACTTGTTCGGTGACGT
TTGCTGTACAACCACAACCAGCCGGGGTCAATCAGGACGCGGTAAACGCA
GGAGTTTCTTTCTTCTTCTTTTTGTTTTTTGCCCCACCTTCCTCCTGCGG
TTCGTTTCATTTTTTATCACGAGAATGGCTCAGCCGTGCCATCCCCTCAT
CAACAGCGAAGTTGAATGTCGTATTCTGTGAGCTTTTCACCTTTTTTTGT
TTTCTACCCCAAAGTTGCAAAAATTTCACCCTCATCGGGATTCGAACTCA
CGACGTTGTTGCTAGCGGGTTTTCAAGGCCACCCATTAGACCACCGGGGC
GACCGTACGCCTGCCTGGAGAGACACGGGAACTCGGGGTAGAACTTGGCG
TTGCCAACTCTTCGGTCTTCTTGCTCAATCTCGCCGTTACTCGTTGAATG
TGAGCGCGCGCGCGAGCGAGAGAGACAGGCGGAGAGGGAGAGTTGCGAGA
GAGTGATGGGGAGCACCAGTGCGTTGATGCGGGGATCTCATGCAGCGGTG
CTCGCCCGACTAGCAGCATCTGTGTGTGGTCATACCCCTGCTCCGCCAAA
GGCCATACTGCCATCCCACCATTTATCTCTCCCCGCTGCTCCACGCACCA
AGGCCGTCACAACCGCAGCCACGACTAGCCTCCGTGCGCCGAATTAGTAC
CCAGCTGTCGTCCTGCGCCGTCTGCACGAAGCTCGTGTCCAACCGAGCCG
CAATGACCACCCGTTGTAAATTGGTGCACCCTTCCTTCTTGTACCCGCAA
ATTTTGTCAGTTTTTTTCCTGCTTTTACAAAAAGTACGCGGACTTAGAAG
AACCAGACTCACATGAATGTTCAGCTTCATCGATCCCAAAGTCTCAACCC
TCTTCCCGTCCTCTCTTCCGCCTCCCGTGTCTCCGTGATTGTTATGGTCG
GGATCGGGTGTGTGTGCCCATCTCACCCGTCCCCCCCTCCCTCCCTCCGT
CGACCCGTGTCGAAAAGGCCCGGACACTACGACGTGCTTTACCCGGCGAT
GGCGCCATGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:3171803..3179212-

>mRNA_P-fluviatile_contig11.1272.1 ID=mRNA_P-fluviatile_contig11.1272.1|Name=mRNA_P-fluviatile_contig11.1272.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1776bp|location=Sequence derived from alignment at P-fluviatile_contig11:3171803..3179212- (Porterinema fluviatile SAG_2381)
ATGTCTGCAGAGGAAGGAACCAACCCACCAGCCGAAGCTGCGGCACCCAT
TGGGGAGATGCCTGCAGAGGAACCTGCCGTGGACCTGGCCAAACAAAACG
AGCAAACCGTGGCTCAAACGAACGCCATCAATGAAGATGTCAAAGCGACA
CAGATGTCTGCAGAGGAAGGAACCAACCCACCAGCCGAAGCTGCGGCACC
CATTGGGGAGATGCCTGCAGAGGAACCTGCCGTGGACCTGGCCAAACAAA
ACGAGCAAACCGTGGCTCAAACGAACGCCATCAATGAAGATGTCAAAGCG
ACACAGGCGAAAGTCGGCCCGAAAGAGGACGTGGAGGCTCTGCTGCCGGA
GTATGAGGGGAACCCCAAGCCAGGGTTTAGGAAGGGGGTGCAAGACTTGG
CCGAGGCGAAAGTCGGCCCGAAAGAGGACGTGGAGGCTCTGCTGCCGGAG
TATGAGGGGAACCCCAAGCCAGGGTTTAGGAAGGGGGTGCAAGACTTGGC
CGAGCGCTATTCAGCCCTCCGGCGCGTGAGGGGTGACGGCAACTGCTTTT
ACCGCTCCTTCCTCTTCGGGTACCTGGAGCGACTGCTGCAGGGCATCAAG
AGCCCCGGCGACGCCAACACGAAGGCCATGCTGGAGCTCAGCCGGCTCCG
GCAGGTGGTTCACGAAAGCGCTATTCAGCCCTCCGGCGCGTGAGGGGTGA
CGGCAACTGCTTTTACCGCTCCTTCCTCTTCGGGTACCTGGAGCGACTGC
TGCAGGGCATCAAGAGCCCCGGCGACGCCAACACGAAGGCCATGCTGGAG
CTCAGCCGGCTCCGGCAGGTGGTTCACGAAAGCAAAGCCGCTTTGATAGC
CCTGGGGTACGAGGAAGTCGCCCTCGACGACTTTTGGCAGACCTTTTTGC
AGGAGTTGGACGCTCTGCCCAACATGGAGATGAGTCAGCTCGAGCAAAGC
CGCTTTGATAGCCCTGGGGTACGAGGAAGTCGCCCTCGACGACTTTTGGC
AGACCTTTTTGCAGGAGTTGGACGCTCTGCCCAACATGGAGATGAGTCAG
CTCGAGATTAATTTCCGAGAAGAAGCGGGGCCGTGCGAGTACATCGTCTG
GTATTGCAGGATGCTGACCAGCGGCTTCCTCAAGCTCAATGCCGACAGAT
TAATTTCCGAGAAGAAGCGGGGCCGTGCGAGTACATCGTCTGGTATTGCA
GGATGCTGACCAGCGGCTTCCTCAAGCTCAATGCCGACAGATTCCTGCCA
TTTCTGGAGCATGCGGTGGACATGCAGGACTTTTGTCAGCGGGAAGTGGA
GCCCATGGGCAAGGAATGCGAACAGATTCCTGCCATTTCTGGAGCATGCG
GTGGACATGCAGGACTTTTGTCAGCGGGAAGTGGAGCCCATGGGCAAGGA
ATGCGAACAGATCCAGATCATGGGTCTGTGCGAGCACCTCAACACCCCCG
TGAAGATAGAATACTTGGATGGTCAGGACTTCCAGGGGCAGCTGGGAAGC
ATCACTCTCCCGGACACGGGGTCGGAACCCATGGTCACGCTGCTGTACAG
ATCCAGATCATGGGTCTGTGCGAGCACCTCAACACCCCCGTGAAGATAGA
ATACTTGGATGGTCAGGACTTCCAGGGGCAGCTGGGAAGCATCACTCTCC
CGGACACGGGGTCGGAACCCATGGTCACGCTGCTGTACAGGCCCGGACAC
TACGACGTGCTTTACCCGGCGATGGCGCCATGAGCCCGGACACTACGACG
TGCTTTACCCGGCGATGGCGCCATGA
back to top