prot_P-fluviatile_contig11.1263.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-fluviatile_contig11.1263.1
Unique Name	prot_P-fluviatile_contig11.1263.1
Type	polypeptide
Organism	Porterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length	365

Homology

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BLAST of mRNA_P-fluviatile_contig11.1263.1 vs. uniprot
Match: D8LMZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMZ5_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 4.640e-80
Identity = 172/359 (47.91%), Postives = 208/359 (57.94%), Query Frame = 0

Query:    4 QKRELGIVPVLSSPHDVVPI---------------VPVQGRLDGPVECYRVASKGLCRVTSVLGWAAVVIGAGEVVAGVLVFDKWRREGGWWAGLLGTLLGIVATGVTADTPIGTPLVAWLLALGLASFVTSLATLLALDGARWQETKGVEACTTSFDGVCWGFDCACSTSPDSWDKCFSPGNGDCGGIESSSPVLLASSIALLALAAVSTMLLAAGIKVKCLGGGVQVGGARAERPHPTKI----------LNGALFLDPVLPETLTGTGPQRSKHRDRENRDRDRSWRPPRSREAEEEDCKEGEEEDRIEAGAVGAEAAKEEEGERREVLTGAEAWAVGYVERLAGGGNKRRRDELN 337
            ++ +  ++PV+SSP ++ P                V VQGR  GPV+ YRVASK LCRV SV GWAAVVIGAGE   G +VF KWRREGGWWAG+L  +LG+  TG+TADTP+GTPLV  L+ LG+AS +TSL T LALDGA+W   K VE C +    VC   +C CS+S   WD CF P NG CGGIE ++  LLASS+ LLALA VS +LLA GIKVK LGGGV+VGG  A RP+P K           ++GA   +P  P  +     QR                               +E D                  +RE LTGAE WAVGYV+RLAGGGNK+RRDELN
Sbjct:   11 KRHQKFVLPVVSSPSNLGPSSRHGLPSEPATPKASVLVQGRAGGPVDRYRVASKRLCRVASVFGWAAVVIGAGETALGAVVFSKWRREGGWWAGVLAVMLGMAGTGITADTPVGTPLVTRLVFLGVASLITSLVTALALDGAKWLSIKDVEMCASDVRSVCQ--ECTCSSSNLLWDMCFPPLNGSCGGIEFAAAPLLASSVVLLALALVSAVLLATGIKVKFLGGGVEVGGEEA-RPNPAKTPGKRRAPYKCVDGA---EPPTPADVL----QRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKESDTAPTA-------------KREFLTGAEPWAVGYVDRLAGGGNKKRRDELN 346

The following BLAST results are available for this feature:

BLAST of mRNA_P-fluviatile_contig11.1263.1 vs. uniprot

BLAST of mRNA_P-fluviatile_contig11.1263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LMZ5_ECTSI	4.640e-80	47.91	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 107..127
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..49
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 128..182
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 77..95
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 96..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..76
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 183..206
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 207..364
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..70
None	No IPR available	TMHMM	TMhelix		coord: 77..95
None	No IPR available	TMHMM	TMhelix		coord: 48..70
None	No IPR available	TMHMM	TMhelix		coord: 184..206
None	No IPR available	TMHMM	TMhelix		coord: 105..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-fluviatile_contig11	contig	P-fluviatile_contig11:3105361..3109108 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Porterinema fluviatile SAG_2381	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-fluviatile_contig11.1263.1	mRNA_P-fluviatile_contig11.1263.1	Porterinema fluviatile SAG_2381	mRNA	P-fluviatile_contig11 3104186..3109182 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-fluviatile_contig11.1263.1 ID=prot_P-fluviatile_contig11.1263.1|Name=mRNA_P-fluviatile_contig11.1263.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=365bp
MVVQKRELGIVPVLSSPHDVVPIVPVQGRLDGPVECYRVASKGLCRVTSV
LGWAAVVIGAGEVVAGVLVFDKWRREGGWWAGLLGTLLGIVATGVTADTP
IGTPLVAWLLALGLASFVTSLATLLALDGARWQETKGVEACTTSFDGVCW
GFDCACSTSPDSWDKCFSPGNGDCGGIESSSPVLLASSIALLALAAVSTM
LLAAGIKVKCLGGGVQVGGARAERPHPTKILNGALFLDPVLPETLTGTGP
QRSKHRDRENRDRDRSWRPPRSREAEEEDCKEGEEEDRIEAGAVGAEAAK
EEEGERREVLTGAEAWAVGYVERLAGGGNKRRRDELNKADRGGRAREDVE
NGGGGASGEGGVAQ*