mRNA_P-fluviatile_contig11.1255.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: D7FQN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQN8_ECTSI) HSP 1 Score: 564 bits (1454), Expect = 1.380e-164 Identity = 361/469 (76.97%), Postives = 401/469 (85.50%), Query Frame = 1
Query: 4291 SGGLSSEGLIEAVTAKVTAEMAARISDLQVSLEHTVASCCRQTLLASLATAEDARANESAALLGDM--------RRAMAETVANPLAKLMVSTARQVVVDPLQASVSTLHGQQQRQAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGNVRRELLESREELSRDVSRAVAAVVQDPVGAAFRECFEGQLIPRIQARKPYPSLFHGAVQRMFEQINETLTRGLQASPLLNGSNRAGAIAEDVSHVRARVEALEGGLRDVMAALSGLGSKMERLVEISVATQQTGLATAASVEAVAASTXXXXXXXXXXXXXXXXXXXSMSGRNSAISTPPIVVVDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPDSTPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTVVRMTTHIVNSLASM 5673
+GG+ +E LIEA+TA+V A+MAAR+S LQ SLE +VASCCR+T+LAS A+AED RANE AAL+GD+ RR M ETVA PLAKL+VSTARQVVVDPLQAS+ST+HG QQR XXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGNVRRELLESRE+LSRD+SR+VA+ VQ+PVG AFRECFEGQLIPRIQ+ AVQRMFEQIN++LTRGLQASPL+N NRAGA+AEDVSHVR RVE LE G+RDV +ALSGLG KMERL E++ A QQTGLATAASVEA XXXXXXXXXXXXXX SMSGR+S TPP VDPREELHRLV AGRVD+AMNRALSASDLPLVMWLCGRLDP +TPS LPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDP +ATIR+HLPVVLRQLKGAL +STP+ISQRGG DV+VVR+TTH+VNSLASM
Sbjct: 1347 AGGMDTEELIEAITARVNADMAARMSGLQSSLEQSVASCCRRTILASTASAEDTRANERAALVGDISSSVDRSVRRGMVETVATPLAKLVVSTARQVVVDPLQASMSTMHGHQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGNVRRELLESREDLSRDISRSVASAVQEPVGVAFRECFEGQLIPRIQS----------AVQRMFEQINDSLTRGLQASPLVN--NRAGALAEDVSHVRDRVEGLESGMRDVASALSGLGVKMERLAELTRAMQQTGLATAASVEAXX-XXXXXXXXXXXXXXXXTTATRSMSGRSSGNVTPP-AAVDPREELHRLVGAGRVDDAMNRALSASDLPLVMWLCGRLDPVATPSTLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPTEATIRAHLPVVLRQLKGALTTSTPIISQRGGTDVSVVRLTTHVVNSLASM 1801
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A836CCU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU1_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.640e-21 Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 5275 REELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPDSTPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTVVRMTTHIVNS 5661
+ E+H+L+ R +EA+ RALSA DLPLV+ +C RLD ++ P+ L Q +LLCL+QQ +D+ D KL WLQ C +A+ P D I++H +L QLK A+ P ++ GG T VR I+NS
Sbjct: 377 KNEIHQLLLESRFEEALTRALSAGDLPLVVSVCKRLDFNAIPAVLSQPVLLCLLQQLS-TDMSTDLPFKLAWLQACAVALSPRDPLIKAHAAGILAQLKAAVEQVVPALTAMGGPSSTAVRTLLLIINS 504
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A1Y1I4G3_KLENI (Ge1_WD40 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4G3_KLENI) HSP 1 Score: 99.8 bits (247), Expect = 5.620e-17 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 5266 VDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPD----STPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVT-VVRMTTHIVNSL 5664
+DP +EL RL+ G+ +EA +AL+A D+P+V WLC ++DP+ S P L Q +LL LV Q G S+L +DT+ KL W+ VLAI+P D + H+ L QL +L + + G DV+ +R H+VNSL
Sbjct: 1274 LDPTKELSRLLAGGKYEEAFLKALNAFDVPMVTWLCNQVDPNAIFASHPLPLSQGVLLWLVSQLG-SELAKDTSKKLDWISQAVLAINPEDPLLAPHMRPYLEQLYQSLHAQLQAVPS--GGDVSRSLRTIIHVVNSL 1408
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: C1EEP4_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EEP4_MICCC) HSP 1 Score: 85.9 bits (211), Expect = 1.860e-14 Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 5266 VDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDP------DSTPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTV---VRMTTHIVNSL 5664
+DP EL RLV G +EA +AL + + V W CGR +P + P L Q +LL L+QQ SDL ++ + KL+W+Q LA+DP+D ++ LPV+L GA+ S +Q V +R+ H+VNSL
Sbjct: 111 MDPTIELGRLVDEGNYEEAFQKALGMASVETVTWTCGRCEPVRDDIFGAVPVPLSQTVLLSLMQQLS-SDLDDEPSLKLQWIQAACLAMDPSDQSLAQALPVIL----GAVFDSLTETAQAPDTPAGVRGDLRLVLHVVNSL 247
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: UPI001F5C40D5 (enhancer of mRNA-decapping protein 4-like isoform X1 n=4 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C40D5) HSP 1 Score: 88.6 bits (218), Expect = 1.360e-13 Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 1
Query: 5260 VVVDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPDS----TPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALA--SSTPVISQRGGADVTVVRMTTHIVNSL 5664
V +DP EL RL++ + DEA AL SDL +V WLC ++D P L Q +LL L+QQ A D+ DT KL+W++ +AI P D TI H+ + Q+ G LA S P IS D+ R+ H++NS+
Sbjct: 1150 VPLDPLNELSRLISERKFDEAFTMALQRSDLFMVSWLCSQVDLQGLCTLNPVPLNQWVLLALLQQL-ACDIGNDTPVKLQWMKAVGMAIQPADQTIAVHVRPIFEQVYGVLAHQQSLPGISPLEANDI---RLMMHVINSV 1286
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A103YJK9_CYNCS (WD40 repeat-containing protein n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YJK9_CYNCS) HSP 1 Score: 87.4 bits (215), Expect = 3.050e-13 Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 5266 VDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPDSTPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTVVRMTTHIVNS 5661
VDP +EL RL+ + +EA AL SD+ +V WLC + P L Q +LL L+QQ A D++ DT+ KL W+ + V+AI P+D I H+ + Q++ L ++ A+++ +R+ +VNS
Sbjct: 1144 VDPAKELSRLIYEHKYEEAFTTALQRSDVQIVSWLCSQGILTRNPIPLSQGVLLSLLQQL-ACDIVNDTSKKLGWMMDLVVAIKPSDGIIAMHVRPIFEQVQSMLNHQASLLPTTSVAELSSIRVVMKLVNS 1274
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A835I2V0_9MAGN (Ge1_WD40 domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835I2V0_9MAGN) HSP 1 Score: 87.4 bits (215), Expect = 3.090e-13 Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 5227 GRNSAISTPPIVVVDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPDSTPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALAS--STPVISQRGGADVTVVRMTTHIVNSL 5664
GRN + P +DP EL RL++ + EA AL SD+ +V WLC + P L Q +LL L+QQ A D+ DT+ KL W++ V+AI+P D I H+ + Q+ L STP + A+ + +R+ H++NS+
Sbjct: 1171 GRNHDTAMPIEAPLDPTIELSRLISERKFGEAFTGALQRSDVSIVSWLCSQGILGMVPLPLSQGVLLALLQQL-ACDISNDTSQKLTWMREAVVAINPADPMIAVHVRPIFEQVYQRLGHTCSTPTTT---AAEKSSIRLVMHVINSM 1314
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A2U1NQD5_ARTAN (WD40 repeat-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NQD5_ARTAN) HSP 1 Score: 82.0 bits (201), Expect = 5.340e-13 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 5266 VDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPD----STPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTVVRMTTHIVNS 5661
VDP +EL RLV + +EA AL SD+ +V WLC ++D S P L Q +LL L+QQ A D+ DT+ KL W+ + V+AI P+D I H+ +L Q+ L + + ++++ +R+ ++NS
Sbjct: 128 VDPTKELSRLVYEHKYEEAFTYALQRSDVWIVSWLCSQVDLQGILTSNPLPLSQGVLLSLLQQL-ACDISNDTSRKLSWMMDTVVAIKPSDGMIAMHVRPILDQVYSILNHQVS-LPNKSVSELSSIRVLMKLINS 261
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A194Q0H1_PAPXU (Enhancer of mRNA-decapping protein 4 n=3 Tax=Papilio xuthus TaxID=66420 RepID=A0A194Q0H1_PAPXU) HSP 1 Score: 84.7 bits (208), Expect = 6.450e-13 Identity = 42/103 (40.78%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 5281 ELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPD---STPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGAL 5580
E+H L+ AG V+ + RAL+A+DL LVM C +P + P RL Q +LL L+QQ A+D++ DT K ++L++ ++ ++P D RSHLP+V+++++G L
Sbjct: 335 EIHNLMRAGEVNSSFERALNAADLTLVMAACRAAEPARLFAPPCRLRQPVLLSLLQQL-ATDMVHDTQLKCRYLEDAIINLNPCDTVTRSHLPIVVKEVRGHL 436
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Match: A0A2U1NAY4_ARTAN (WD40 repeat-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NAY4_ARTAN) HSP 1 Score: 82.0 bits (201), Expect = 6.800e-13 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 5266 VDPREELHRLVTAGRVDEAMNRALSASDLPLVMWLCGRLDPD----STPSRLPQHILLCLVQQFGASDLLEDTTAKLKWLQNCVLAIDPNDATIRSHLPVVLRQLKGALASSTPVISQRGGADVTVVRMTTHIVNS 5661
VDP +EL RLV + +EA AL SD+ +V WLC ++D S P L Q +LL L+QQ A D+ DT+ KL W+ + V+AI P+D I H+ +L Q+ L + + ++++ +R+ ++NS
Sbjct: 142 VDPTKELSRLVYEHKYEEAFTYALQRSDVWIVSWLCSQVDLQGILTSNPLPLSQGVLLSLLQQL-ACDISNDTSRKLSWMMDTVVAIKPSDGMIAMHVRPILDQVYSILNHQVS-LPNKSVSELSSIRVLMKLINS 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1255.1 >prot_P-fluviatile_contig11.1255.1 ID=prot_P-fluviatile_contig11.1255.1|Name=mRNA_P-fluviatile_contig11.1255.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1347bp MSAAFNAFFAQFAGGGGAADGSLSPASAAPEGGGDSGGGGSGSGGGGVSGback to top mRNA from alignment at P-fluviatile_contig11:2987337..3006568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1255.1 ID=mRNA_P-fluviatile_contig11.1255.1|Name=mRNA_P-fluviatile_contig11.1255.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=19232bp|location=Sequence derived from alignment at P-fluviatile_contig11:2987337..3006568- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2987337..3006568- >mRNA_P-fluviatile_contig11.1255.1 ID=mRNA_P-fluviatile_contig11.1255.1|Name=mRNA_P-fluviatile_contig11.1255.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=8082bp|location=Sequence derived from alignment at P-fluviatile_contig11:2987337..3006568- (Porterinema fluviatile SAG_2381)back to top |