prot_P-fluviatile_contig6.12646.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12646.1
Unique Nameprot_P-fluviatile_contig6.12646.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length337
Homology
BLAST of mRNA_P-fluviatile_contig6.12646.1 vs. uniprot
Match: A0A6H5KBW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW0_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.390e-42
Identity = 135/336 (40.18%), Postives = 162/336 (48.21%), Query Frame = 0
Query:   28 WGQKNKVGGLIVAMMDRRFDGGYQIFAPEVDRDSRYDAPEGGGGQDSIVERTYERPRGRSLPKWDRGAHVTVRRPPSPXXXTAASTWGSIGSGLLQQPWDCQACTFFNESPAFRSACEMCRTPRPSPVADFGGXXXXXXXXXXKGSPRISGASSAIPEGGEAFASAGAFGAV-------------------------------PRMES------AVAGSRANGVPGMDRVADAGGSD-NDGEVDGMLGGLSPGGGATLPAASTSGLAASAAGENAGASRSVAGAPDRAAIGWEGGKEWQGFGNASFGHDFPVSSSSRQTPLGFSLGDSRGDESGAG 325
            WG+K KVGG+IV M++RR DGGYQIF+PE++RDS   A  G      +V RTYERPRGRSLPKWDR       RP  P     AS  G +GSG   QPW+C ACT+ NE PAFR+ACE+C TPRPS       XXXXXXXXXX                                                            P++E+      +V G  A G+P        GG +  D EVDG+LGG+SPGGGA    +ST    +   G    AS +  G        WE G EWQGFG+ SFG + PV  S RQ    F     R  E+G G
Sbjct:  806 WGEKKKVGGVIVGMLERRVDGGYQIFSPEIERDSPIAAQRG------VVARTYERPRGRSLPKWDRSDDAVSTRPLPPPPPRPASKLGLVGSGFSHQPWNCPACTYLNEDPAFRAACEICNTPRPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPQIEACIPSGFSVGGGEAGGLP-------VGGIEVEDNEVDGILGGISPGGGAFPVVSSTDQAESRHCGSATAASAAALGGS------WEAGDEWQGFGSGSFGQESPVKCSPRQPATAFEFS-FRNSEAGGG 1121          
BLAST of mRNA_P-fluviatile_contig6.12646.1 vs. uniprot
Match: D7G1S7_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S7_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 5.150e-39
Identity = 126/329 (38.30%), Postives = 150/329 (45.59%), Query Frame = 0
Query:   41 MMDRRFDGGYQIFAPEVDRDSRYDAPEGGGGQDSIVERTYERPRGRSLPKWDRGAHVTVRRPPSPXXXTA---ASTWGSIGSGLLQQPWDCQACTFFNESPAFRSACEMCRTPRPSPVADFGGXXXXXXXXXXKGSPRISGASSAIPEGGEAFASAGAFGAV-----------------------------------------------PRMES------AVAGSRANGVPGMDRVADAGGSDNDGEVDGMLGGLSPGGGATLPAASTSGLAASA-AGENAGASRSVAGAPDRAAIGWEGGKEWQGFGNASFGHDFPVSSSSRQTPLGF 312
            M++RR DGGYQIF+PE++RDS   A  G      +V RTYERPRGRSLPKWDR       RP   XXX     AS  G IGSG  QQPW+C ACT+ NE PAFR+ACE+C TPRPS  AD  G          +             +  E   S G                                                    P++E+      +V G  A G+P      D      D EVDG+LGG+SPGGGA  P  S +  AAS   G    AS +  G       GWE G EWQGFG+ SFG + PV+ SSRQ    F
Sbjct:    1 MLERRVDGGYQIFSPEIERDSPIAAQRG------VVARTYERPRGRSLPKWDRTDDAVSTRPAPXXXXXXXRPASKLGLIGSGFSQQPWNCPACTYLNEDPAFRAACEICNTPRPSAAADAVGTGTSGDGGEQRHDDW---------DDSEVLKSCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAPPPQIEACIPSGFSVGGGEAGGLPXXXXXVD------DNEVDGILGGVSPGGGA-FPVVSGAYQAASGHCGSATAASAAALGG------GWEAGDEWQGFGSGSFGQESPVNCSSRQPTKAF 301          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBW0_9PHAE1.390e-4240.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1S7_ECTSI5.150e-3938.30RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.140coord: 119..156
e-value: 4.5E-7
score: 31.5
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 124..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:3210199..3213566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12646.1mRNA_P-fluviatile_contig6.12646.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 3209114..3218564 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12646.1 ID=prot_P-fluviatile_contig6.12646.1|Name=mRNA_P-fluviatile_contig6.12646.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=337bp
MPPPLSPSSPLRPTSRSYDDGVRCSPSWGQKNKVGGLIVAMMDRRFDGGY
QIFAPEVDRDSRYDAPEGGGGQDSIVERTYERPRGRSLPKWDRGAHVTVR
RPPSPPPPTAASTWGSIGSGLLQQPWDCQACTFFNESPAFRSACEMCRTP
RPSPVADFGGGGGGKAGGGGKGSPRISGASSAIPEGGEAFASAGAFGAVP
RMESAVAGSRANGVPGMDRVADAGGSDNDGEVDGMLGGLSPGGGATLPAA
STSGLAASAAGENAGASRSVAGAPDRAAIGWEGGKEWQGFGNASFGHDFP
VSSSSRQTPLGFSLGDSRGDESGAGAGSCAREGSAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf