mRNA_P-fluviatile_contig6.12581.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI) HSP 1 Score: 192 bits (489), Expect = 2.720e-52 Identity = 101/164 (61.59%), Postives = 120/164 (73.17%), Query Frame = 2
Query: 1511 SHMVAALPRSACLSETSNNIAATKVNLNPGGPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTG-LKREPPYAQGFTVKITGPGSVYIQSTHMGRLSRVRAA---AQRASGGGDLMKAAALTLVVMIAVFSLLDWED 1990
S + A P S N+I+ K+ L G Q +EMR+IAG GMCYI GGGAAVQK+LG+ E M+VEFGC+AAVS++CKIV E+R G L REPPY QGF VKITGPGSV+IQSTH GRLSR A AQ SGGGD+MKAA LTLV+MI VF++LDWE+
Sbjct: 109 SGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIVVFTVLDWEE 272
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: UPI0008256974 (TIGR00266 family protein n=2 Tax=Bacillales TaxID=1385 RepID=UPI0008256974) HSP 1 Score: 60.5 bits (145), Expect = 2.790e-6 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 2
Query: 1628 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGGD 1921
M+++ G GMC++ GG +K L + +LV+ GC+ A++ + E G+K +G F + GPGSV+IQS RL SRV AAA G D
Sbjct: 150 MQKLEGDGMCFVHAGGTITRKELLPGQTLLVDTGCLVAMTSNVNYNIEFVKGIKTAMFGGEGLFFATLRGPGSVWIQSLPFSRLASRVFAAAPSRGGAKD 249
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A848F8M0_9BURK (TIGR00266 family protein n=4 Tax=Azohydromonas TaxID=312063 RepID=A0A848F8M0_9BURK) HSP 1 Score: 60.5 bits (145), Expect = 3.080e-6 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 2
Query: 1628 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 1918
M+R+ G G+ ++ GG V++ L + +L++ GC+ A++ S + +K +G F ++TGPG+V++QS RL SRV AAA + GGG
Sbjct: 149 MQRLDGDGLAFVHAGGTVVRRELQPGQTLLIDTGCVVAMTPSVNFEIQYVGKIKTALFGGEGLFFARVTGPGTVWLQSLPFSRLASRVFAAAPQTGGGG 247
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A2N2WI46_9BACT (TIGR00266 family protein n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2N2WI46_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 3.430e-6 Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query: 1601 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLS-RVRAA 1894
G F ++R+ G G+ ++Q GGA VQ++L E + V+ GC+ A S + G K +G F VK+TGPG+VY+QS RL+ R+ AA
Sbjct: 128 GLFGGEGFILQRLTGHGLAFVQAGGAIVQRNLHPGEVLKVDTGCLVAFHPSVDYDIQFIGGFKNALFGGEGLFLVKLTGPGTVYLQSLPFSRLADRITAA 227
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A316CV55_9BACT (Uncharacterized protein (TIGR00266 family) n=1 Tax=Oceanotoga teriensis TaxID=515440 RepID=A0A316CV55_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 3.470e-6 Identity = 39/108 (36.11%), Postives = 53/108 (49.07%), Query Frame = 2
Query: 1601 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLSRVRAAAQRASGGGD 1921
G F ++R+ G GM +I GGA V+K L E + V+ GCI S S E G K +G F K++GPG+VY+QS RL+ AA S G+
Sbjct: 128 GLFGGEGFILQRLQGHGMAFIHAGGALVEKQLNAGEILKVDTGCIVGFSNSIHYDIEFIGGFKNALFGGEGMFLAKLSGPGTVYLQSLPFSRLADRIVAASGYSNRGE 235
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A0Q6X8P2_9BURK (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A0Q6X8P2_9BURK) HSP 1 Score: 59.7 bits (143), Expect = 5.420e-6 Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 2
Query: 1601 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 1918
G F M+++ G G+ ++ GG V++ L E +LV+ GC+ A++ + +K +G F K+TGPG+V++QS RL SRV AAA + GGG
Sbjct: 139 GFFGGEGFVMQKLEGDGLAFVHAGGTVVRRELKADETLLVDTGCLVAMTPGVNFEIQYVGKIKTALFGGEGLFFAKVTGPGTVWLQSLPFSRLASRVFAAAPQRGGGG 246
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A5C6U3D5_9BURK (TIGR00266 family protein n=3 Tax=Burkholderiales genera incertae sedis TaxID=224471 RepID=A0A5C6U3D5_9BURK) HSP 1 Score: 59.7 bits (143), Expect = 5.420e-6 Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 2
Query: 1628 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 1918
M+++ G G+ ++ GG V++ L + +L++ GC+ A++ + + +K +G F K+TGPG+V++QS RL SRV AAA + GGG
Sbjct: 148 MQKLEGDGLAFVHAGGTVVKRELQAGQTLLIDTGCVVAMTPNVNFEIQYVGKIKTALFGGEGLFFAKVTGPGTVWLQSLPFSRLASRVFAAAPQTGGGG 246
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: H5WHP1_9BURK (TIGR00266 family protein n=1 Tax=Burkholderiales bacterium JOSHI_001 TaxID=864051 RepID=H5WHP1_9BURK) HSP 1 Score: 59.7 bits (143), Expect = 5.470e-6 Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 2
Query: 1628 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 1918
M+++ G G+ ++ GG +++ L + +LV+ GC+ A + S + +K +G F K+TGPG++++QS RL SRV AAA +A GGG
Sbjct: 149 MQKLEGNGLAFVHAGGTVLKRELAPGQTLLVDTGCVVAYTPSVNFEIQYVGKVKTALFGGEGLFFAKLTGPGTLWLQSLPFSRLASRVFAAAPQAGGGG 247
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A7Y7TWL8_9BACT (TIGR00266 family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y7TWL8_9BACT) HSP 1 Score: 59.3 bits (142), Expect = 6.190e-6 Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = 2
Query: 1601 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLS-RVRAAA----QRASGGGDL 1924
G F ++R++G G+ ++ GG +Q+ L E++ V+ GCI A+S S + G K +G F +++GPG+VY+QS RL+ R+ AAA +++SG G +
Sbjct: 128 GLFGGEGFILQRLSGDGLAFVHAGGTIIQRDLAPNENLRVDTGCIVAMSPSVDYDIQFVGGFKNALFGGEGLFLARLSGPGTVYLQSLPFSRLADRIHAAAGGHREQSSGIGGI 241
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: B7KDN9_GLOC7 (Uncharacterized protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KDN9_GLOC7) HSP 1 Score: 58.5 bits (140), Expect = 8.570e-6 Identity = 30/85 (35.29%), Postives = 49/85 (57.65%), Query Frame = 2
Query: 1628 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLS 1879
++R+ G G+ +I GGA V+K L E + V+ GC+ A S + + E G K +G F K+TGPG++Y+QS + +L+
Sbjct: 137 LQRLQGDGLAFIHAGGALVEKRLMSGEDIRVDTGCVVAFSPTVRYEIEMVKGFKNVLFGGEGLFLAKLTGPGTIYLQSLPLSKLA 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12581.1 >prot_P-fluviatile_contig6.12581.1 ID=prot_P-fluviatile_contig6.12581.1|Name=mRNA_P-fluviatile_contig6.12581.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=172bp MNVREDVPMMSHMVAALPRSACLSETSNNIAATKVNLNPGGPFPQHHIEMback to top mRNA from alignment at P-fluviatile_contig6:2558245..2561120+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12581.1 ID=mRNA_P-fluviatile_contig6.12581.1|Name=mRNA_P-fluviatile_contig6.12581.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2876bp|location=Sequence derived from alignment at P-fluviatile_contig6:2558245..2561120+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:2558245..2561120+ >mRNA_P-fluviatile_contig6.12581.1 ID=mRNA_P-fluviatile_contig6.12581.1|Name=mRNA_P-fluviatile_contig6.12581.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1032bp|location=Sequence derived from alignment at P-fluviatile_contig6:2558245..2561120+ (Porterinema fluviatile SAG_2381)back to top |