prot_P-fluviatile_contig6.12581.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12581.1
Unique Nameprot_P-fluviatile_contig6.12581.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length172
Homology
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.070e-58
Identity = 101/164 (61.59%), Postives = 120/164 (73.17%), Query Frame = 0
Query:   11 SHMVAALPRSACLSETSNNIAATKVNLNPGGPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTG-LKREPPYAQGFTVKITGPGSVYIQSTHMGRLSRVRAA---AQRASGGGDLMKAAALTLVVMIAVFSLLDWED 170
            S  + A P     S   N+I+  K+ L   G   Q  +EMR+IAG GMCYI GGGAAVQK+LG+ E M+VEFGC+AAVS++CKIV E+R G L REPPY QGF VKITGPGSV+IQSTH GRLSR   A   AQ  SGGGD+MKAA LTLV+MI VF++LDWE+
Sbjct:  109 SGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIVVFTVLDWEE 272          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: UPI0008256974 (TIGR00266 family protein n=2 Tax=Bacillales TaxID=1385 RepID=UPI0008256974)

HSP 1 Score: 60.5 bits (145), Expect = 8.030e-8
Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   50 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGGD 147
            M+++ G GMC++  GG   +K L   + +LV+ GC+ A++ +     E   G+K      +G F   + GPGSV+IQS    RL SRV AAA    G  D
Sbjct:  150 MQKLEGDGMCFVHAGGTITRKELLPGQTLLVDTGCLVAMTSNVNYNIEFVKGIKTAMFGGEGLFFATLRGPGSVWIQSLPFSRLASRVFAAAPSRGGAKD 249          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A848F8M0_9BURK (TIGR00266 family protein n=4 Tax=Azohydromonas TaxID=312063 RepID=A0A848F8M0_9BURK)

HSP 1 Score: 60.5 bits (145), Expect = 8.550e-8
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   50 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 146
            M+R+ G G+ ++  GG  V++ L   + +L++ GC+ A++ S     +    +K      +G F  ++TGPG+V++QS    RL SRV AAA +  GGG
Sbjct:  149 MQRLDGDGLAFVHAGGTVVRRELQPGQTLLIDTGCVVAMTPSVNFEIQYVGKIKTALFGGEGLFFARVTGPGTVWLQSLPFSRLASRVFAAAPQTGGGG 247          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A2N2WI46_9BACT (TIGR00266 family protein n=2 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A2N2WI46_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.040e-7
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   41 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLS-RVRAA 138
            G F      ++R+ G G+ ++Q GGA VQ++L   E + V+ GC+ A   S     +   G K      +G F VK+TGPG+VY+QS    RL+ R+ AA
Sbjct:  128 GLFGGEGFILQRLTGHGLAFVQAGGAIVQRNLHPGEVLKVDTGCLVAFHPSVDYDIQFIGGFKNALFGGEGLFLVKLTGPGTVYLQSLPFSRLADRITAA 227          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A316CV55_9BACT (Uncharacterized protein (TIGR00266 family) n=1 Tax=Oceanotoga teriensis TaxID=515440 RepID=A0A316CV55_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 1.050e-7
Identity = 39/108 (36.11%), Postives = 53/108 (49.07%), Query Frame = 0
Query:   41 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLSRVRAAAQRASGGGD 147
            G F      ++R+ G GM +I  GGA V+K L   E + V+ GCI   S S     E   G K      +G F  K++GPG+VY+QS    RL+    AA   S  G+
Sbjct:  128 GLFGGEGFILQRLQGHGMAFIHAGGALVEKQLNAGEILKVDTGCIVGFSNSIHYDIEFIGGFKNALFGGEGMFLAKLSGPGTVYLQSLPFSRLADRIVAASGYSNRGE 235          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A0Q6X8P2_9BURK (Uncharacterized protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A0Q6X8P2_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 1.590e-7
Identity = 37/108 (34.26%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   41 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 146
            G F      M+++ G G+ ++  GG  V++ L   E +LV+ GC+ A++       +    +K      +G F  K+TGPG+V++QS    RL SRV AAA +  GGG
Sbjct:  139 GFFGGEGFVMQKLEGDGLAFVHAGGTVVRRELKADETLLVDTGCLVAMTPGVNFEIQYVGKIKTALFGGEGLFFAKVTGPGTVWLQSLPFSRLASRVFAAAPQRGGGG 246          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A5C6U3D5_9BURK (TIGR00266 family protein n=3 Tax=Burkholderiales genera incertae sedis TaxID=224471 RepID=A0A5C6U3D5_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 1.590e-7
Identity = 33/99 (33.33%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   50 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 146
            M+++ G G+ ++  GG  V++ L   + +L++ GC+ A++ +     +    +K      +G F  K+TGPG+V++QS    RL SRV AAA +  GGG
Sbjct:  148 MQKLEGDGLAFVHAGGTVVKRELQAGQTLLIDTGCVVAMTPNVNFEIQYVGKIKTALFGGEGLFFAKVTGPGTVWLQSLPFSRLASRVFAAAPQTGGGG 246          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: H5WHP1_9BURK (TIGR00266 family protein n=1 Tax=Burkholderiales bacterium JOSHI_001 TaxID=864051 RepID=H5WHP1_9BURK)

HSP 1 Score: 59.7 bits (143), Expect = 1.600e-7
Identity = 34/99 (34.34%), Postives = 57/99 (57.58%), Query Frame = 0
Query:   50 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 146
            M+++ G G+ ++  GG  +++ L   + +LV+ GC+ A + S     +    +K      +G F  K+TGPG++++QS    RL SRV AAA +A GGG
Sbjct:  149 MQKLEGNGLAFVHAGGTVLKRELAPGQTLLVDTGCVVAYTPSVNFEIQYVGKVKTALFGGEGLFFAKLTGPGTLWLQSLPFSRLASRVFAAAPQAGGGG 247          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A7Y7TWL8_9BACT (TIGR00266 family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y7TWL8_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 1.960e-7
Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   41 GPFPQHHIEMRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRLS-RVRAAA----QRASGGGDL 148
            G F      ++R++G G+ ++  GG  +Q+ L   E++ V+ GCI A+S S     +   G K      +G F  +++GPG+VY+QS    RL+ R+ AAA    +++SG G +
Sbjct:  128 GLFGGEGFILQRLSGDGLAFVHAGGTIIQRDLAPNENLRVDTGCIVAMSPSVDYDIQFVGGFKNALFGGEGLFLARLSGPGTVYLQSLPFSRLADRIHAAAGGHREQSSGIGGI 241          
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Match: A0A536V1E7_9PROT (TIGR00266 family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536V1E7_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 3.010e-7
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 0
Query:   50 MRRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAA----VSESCKIVAEDRTGLKREPPYAQG-FTVKITGPGSVYIQSTHMGRL-SRVRAAAQRASGGG 146
            M+R+ G G+ ++  GG  V++ L   + +LV+ GC+ A    VS   + V + +T L       +G F  K+TGPG+V++QS    RL SRV AAA +  GGG
Sbjct:  148 MQRLDGEGLAFVHAGGTVVKRELQPGQVLLVDTGCVVAYTPNVSFDIQYVGKIKTALFG----GEGLFFAKMTGPGTVWLQSLPFSRLASRVFAAAPQTGGGG 246          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ3_ECTSI1.070e-5861.59Altered inheritance of mitochondria protein 24, mi... [more]
UPI00082569748.030e-837.00TIGR00266 family protein n=2 Tax=Bacillales TaxID=... [more]
A0A848F8M0_9BURK8.550e-834.34TIGR00266 family protein n=4 Tax=Azohydromonas Tax... [more]
A0A2N2WI46_9BACT1.040e-737.00TIGR00266 family protein n=2 Tax=unclassified Bact... [more]
A0A316CV55_9BACT1.050e-736.11Uncharacterized protein (TIGR00266 family) n=1 Tax... [more]
A0A0Q6X8P2_9BURK1.590e-734.26Uncharacterized protein n=2 Tax=Burkholderiales Ta... [more]
A0A5C6U3D5_9BURK1.590e-733.33TIGR00266 family protein n=3 Tax=Burkholderiales g... [more]
H5WHP1_9BURK1.600e-734.34TIGR00266 family protein n=1 Tax=Burkholderiales b... [more]
A0A7Y7TWL8_9BACT1.960e-732.46TIGR00266 family protein n=1 Tax=Bacteroidetes bac... [more]
A0A536V1E7_9PROT3.010e-737.86TIGR00266 family protein n=1 Tax=Betaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 22..127
e-value: 1.1E-14
score: 54.7
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 15..147
e-value: 1.5E-13
score: 52.3
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 44..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 40..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2559725..2560776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12581.1mRNA_P-fluviatile_contig6.12581.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2558245..2561120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12581.1 ID=prot_P-fluviatile_contig6.12581.1|Name=mRNA_P-fluviatile_contig6.12581.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=172bp
MNVREDVPMMSHMVAALPRSACLSETSNNIAATKVNLNPGGPFPQHHIEM
RRIAGVGMCYIQGGGAAVQKSLGQWEHMLVEFGCIAAVSESCKIVAEDRT
GLKREPPYAQGFTVKITGPGSVYIQSTHMGRLSRVRAAAQRASGGGDLMK
AAALTLVVMIAVFSLLDWEDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom