prot_P-fluviatile_contig6.12554.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12554.1
Unique Nameprot_P-fluviatile_contig6.12554.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length106
Homology
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BLAST of mRNA_P-fluviatile_contig6.12554.1 vs. uniprot
Match: D7G3S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3S5_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-18
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 0 
Query:   34 PGSQRIVYLDNPVVMEKPAGEKTGLLPKQ--KRPESRASKQIKRCQLVTVVVLSVVTVAVIILFTTGDSRRNDR 105
            PGS  IV+L  PVV+++  GEKT LLP Q  +RPES ASKQIKRCQLV VV++S+VT AVIILF  GD R ++R
Sbjct:   36 PGSPSIVFLKAPVVLQRTPGEKTKLLPSQTQQRPESHASKQIKRCQLVAVVLISLVTAAVIILFLAGDPRTDNR 109
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BLAST of mRNA_P-fluviatile_contig6.12554.1 vs. uniprot
Match: A0A6H5KEN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN3_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 3.250e-17
Identity = 45/71 (63.38%), Postives = 53/71 (74.65%), Query Frame = 0 
Query:   34 PGSQRIVYLDNPVVMEKPAGEKTGLLPK--QKRPESRASKQIKRCQLVTVVVLSVVTVAVIILFTTGDSRR 102
            PGS  IV+L  PVV+++P GE T LLP   Q+RPE  ASKQIKRCQLV VV++S+VT AVIILF   D RR
Sbjct:   36 PGSPSIVFLKAPVVLQRPPGEHTKLLPSETQQRPECNASKQIKRCQLVVVVLISLVTAAVIILFLADDGRR 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3S5_ECTSI1.140e-1863.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEN3_9PHAE3.250e-1763.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..105
NoneNo IPR availableTMHMMTMhelixcoord: 78..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2325788..2329670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12554.1mRNA_P-fluviatile_contig6.12554.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 2324438..2329733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12554.1 ID=prot_P-fluviatile_contig6.12554.1|Name=mRNA_P-fluviatile_contig6.12554.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=106bp
MTLACSDPYDHADIENVKIFMPVDNDLQSVMAFPGSQRIVYLDNPVVMEK
PAGEKTGLLPKQKRPESRASKQIKRCQLVTVVVLSVVTVAVIILFTTGDS
RRNDR*
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