mRNA_P-fluviatile_contig11.1243.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1243.1
Unique NamemRNA_P-fluviatile_contig11.1243.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1243.1 vs. uniprot
Match: D8LKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH2_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 7.000e-99
Identity = 176/229 (76.86%), Postives = 192/229 (83.84%), Query Frame = 3 
Query:  297 MSWAEPSDDMDTLSELPPTG--SSSIKSHKVSRSAPS-----KSSRRVGGASKSERRLLMEAKAGVGAAIAEERQERMIAKRRARKFVRFLYYAFKVVGVAACVFTSGLNLTLVYMRQDMRLQDRLIRSYLISFGVGGVLAELDTPFAKSNFRALQKWWFKAPFYVFMAWLCFDPDHSRGTVWFFLELAAFIALQAMAAMSVVLNVCLREVLERSGALGKRRSKRSAAS 962
            MSWAEP+D MDTLSELP      SS +  K+SR+  S     KS    GGASKSERRLLMEAKAGVGAAIAE+RQER+IAKRRAR+ VR LYYA KVVGVAACV+TSGLN TLVYMR D  LQDRL+RSYL+ FGVGGVLAELDTPFAK+NFRALQKWWFKAPFYVFMAWLCFD   SRGTVWF LELA+F+ALQ M AM+VVLNVCLREVLERSGA GKRR K+SA+S
Sbjct:    1 MSWAEPAD-MDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASS 228
[Close]
BLAST of mRNA_P-fluviatile_contig11.1243.1 vs. uniprot
Match: A0A6H5JH79_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH79_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 7.310e-73
Identity = 120/161 (74.53%), Postives = 135/161 (83.85%), Query Frame = 3 
Query:  492 ERQERMIAKRRARKFVRFLYYAFKVVGVAACVFTSGLNLTLVYMRQD----MRLQDRLIRSYLISFGVGGVLAELDTPFAKSNFRALQKWWFKAPFYVFMAWLCFDPDHSRGTVWFFLELAAFIALQAMAAMSVVLNVCLREVLERSGALGKRRSKRSAAS 962
            +RQER+ AKRRAR+ VR LYYA KVVGV AC +TSGLN TLVYMR D    +     L+RSYL+ FGVGGVLAELDTPFAK+NFRALQKWWFKAPFYVFMAWLCFD   SRGTVWF LELA+F+ALQ +  M++VLNVCLREVLERSGALGKRR K+SA+S
Sbjct:    8 DRQERLAAKRRARRIVRVLYYAMKVVGVGACFYTSGLNATLVYMRPDFGRELLASSLLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFSLELASFVALQTVGVMALVLNVCLREVLERSGALGKRRGKKSASS 168
[Close]
BLAST of mRNA_P-fluviatile_contig11.1243.1 vs. uniprot
Match: A0A835YSD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD9_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.130e-19
Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 3 
Query:  480 AIAEERQERMIAKRRARKFVRFLYYAFKVVGVAACVFTSGLNLTLVYMRQDMRLQDRLIRSYLISFGVGGVLAELDTPFAKSNFRALQKWWFKAPFYVFMAW--LCFDPDHSRGTVWFFLELAAFIALQAMAAMSVVLNVCLREVLERS 920
            A+ E  +E  IA+RRAR  V + Y+  K   VA  V     N+ ++  R +  L++R +R YLI F +  +LAELDT FA+ NFRALQKWW KA FYVF+    L + P  + G     L+LA    L A+A  +V L  CLR +LE++
Sbjct:   73 AMEEVAREAAIARRRARACVTYSYWVLKSTAVATHVLMITTNVWVLARRHEPDLRERAVRGYLIPFSLAALLAELDTRFARDNFRALQKWWCKALFYVFLGTVNLGWTPLGALGRPLTRLQLATAGVLCALALGNVALYTCLRRLLEKT 221
[Close]
BLAST of mRNA_P-fluviatile_contig11.1243.1 vs. uniprot
Match: A0A6H5JBH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.060e-7
Identity = 47/72 (65.28%), Postives = 54/72 (75.00%), Query Frame = 3 
Query:  297 MSWAEPSDDMDTLSELPPTG--SSSIKSHKVSRSAPS--KSSRRVGG---ASKSERRLLMEAKAGVGAAIAE 491
            MSWAEP+D MDTLSELP      SS +  K+SR+A S  +S++  GG   ASKSERRLLMEAKAGVGAAIAE
Sbjct:    1 MSWAEPAD-MDTLSELPRQSMVGSSGRPPKLSRTASSVGRSAKSRGGSRGASKSERRLLMEAKAGVGAAIAE 71
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKH2_ECTSI7.000e-9976.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH79_9PHAE7.310e-7374.53Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YSD9_9STRA3.130e-1942.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JBH1_9PHAE1.060e-765.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2874003..2879330 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-16_002950.1
Exons6
Model size1476
Cds size1179
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815472.8996043-UTR-P-fluviatile_contig11:2874002..28742981622815472.8996043-UTR-P-fluviatile_contig11:2874002..2874298Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2874003..2874298 +
1693561964.753525-UTR-P-fluviatile_contig11:2874002..28742981693561964.753525-UTR-P-fluviatile_contig11:2874002..2874298Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2874003..2874298 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815472.910386-CDS-P-fluviatile_contig11:2874298..28744931622815472.910386-CDS-P-fluviatile_contig11:2874298..2874493Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2874299..2874493 +
1693561964.7619488-CDS-P-fluviatile_contig11:2874298..28744931693561964.7619488-CDS-P-fluviatile_contig11:2874298..2874493Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2874299..2874493 +
1622815472.9251826-CDS-P-fluviatile_contig11:2875302..28754501622815472.9251826-CDS-P-fluviatile_contig11:2875302..2875450Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2875303..2875450 +
1693561965.2395704-CDS-P-fluviatile_contig11:2875302..28754501693561965.2395704-CDS-P-fluviatile_contig11:2875302..2875450Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2875303..2875450 +
1622815472.9355958-CDS-P-fluviatile_contig11:2876551..28766871622815472.9355958-CDS-P-fluviatile_contig11:2876551..2876687Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2876552..2876687 +
1693561965.257611-CDS-P-fluviatile_contig11:2876551..28766871693561965.257611-CDS-P-fluviatile_contig11:2876551..2876687Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2876552..2876687 +
1622815472.9453673-CDS-P-fluviatile_contig11:2877210..28774701622815472.9453673-CDS-P-fluviatile_contig11:2877210..2877470Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2877211..2877470 +
1693561965.2764485-CDS-P-fluviatile_contig11:2877210..28774701693561965.2764485-CDS-P-fluviatile_contig11:2877210..2877470Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2877211..2877470 +
1622815472.9548008-CDS-P-fluviatile_contig11:2878103..28781641622815472.9548008-CDS-P-fluviatile_contig11:2878103..2878164Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2878104..2878164 +
1693561965.2849624-CDS-P-fluviatile_contig11:2878103..28781641693561965.2849624-CDS-P-fluviatile_contig11:2878103..2878164Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2878104..2878164 +
1622815472.9658957-CDS-P-fluviatile_contig11:2878951..28793301622815472.9658957-CDS-P-fluviatile_contig11:2878951..2879330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2878952..2879330 +
1693561965.623657-CDS-P-fluviatile_contig11:2878951..28793301693561965.623657-CDS-P-fluviatile_contig11:2878951..2879330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2878952..2879330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1243.1prot_P-fluviatile_contig11.1243.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2874299..2879330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1243.1

>prot_P-fluviatile_contig11.1243.1 ID=prot_P-fluviatile_contig11.1243.1|Name=mRNA_P-fluviatile_contig11.1243.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=393bp
MSWAEPSDDMDTLSELPPTGSSSIKSHKVSRSAPSKSSRRVGGASKSERR
LLMEAKAGVGAAIAEERQERMIAKRRARKFVRFLYYAFKVVGVAACVFTS
GLNLTLVYMRQDMRLQDRLIRSYLISFGVGGVLAELDTPFAKSNFRALQK
WWFKAPFYVFMAWLCFDPDHSRGTVWFFLELAAFIALQAMAAMSVVLNVC
LREVLERSGALGKRRSKRSAASRRRRRLGIKSSSLSRGAGTGGGGAGGAS
AATSSSAGLGVSSFRDRDRRRPNRPLTSPTGIEGGGGFGAEDRDHAPEMV
PERAVLSSSSARLASPTASSTYVGVGGGGGGGAGVGGGFAASGRLGSYGA
INRSDAGGAGSVGVGVGGVGGVGGGGGLGGGISGKIKWWLDRG
back to top

mRNA from alignment at P-fluviatile_contig11:2874003..2879330+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1243.1 ID=mRNA_P-fluviatile_contig11.1243.1|Name=mRNA_P-fluviatile_contig11.1243.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5328bp|location=Sequence derived from alignment at P-fluviatile_contig11:2874003..2879330+ (Porterinema fluviatile SAG_2381)
GGCGCTATGTCAGCAGTGCACATAGGCCTACTGCTGTGCACGGGCTGTGT
TTTTGCTCTGAGATCCTTTCATTCGGCTATCAAAGCGTTGCAGATACATG
GCACCAGCCAAACTTGGCGCTGTCAGCGGTTTTGTCTCTTTTCTGTGTGT
GTACATCACCAAACGGTCGAATACAGACACATCCCTCCCACCTCTGCGTG
CCGCGAAGGCTTGGTCAGATCGGCAGTCGCGTCTCCTGATAGGGTGTAGG
TGTCCTTAAAAATCGTACTACGATCTGGTCATCCGGCACTTTTACAATGT
CGTGGGCAGAGCCTTCGGACGACATGGACACCCTGAGCGAGTTGCCTCCA
ACCGGTAGCAGCAGCATCAAGTCTCACAAGGTCTCGCGTTCTGCTCCTTC
GAAATCTTCGAGACGGGTCGGGGGCGCTTCCAAGTCGGAGCGGAGGCTTC
TGATGGAGGCGAAAGCCGGCGTTGGGGCTGCCATAGCAGAGGTGCGCAGT
AGAGTGGGTAGATTTTGTTGCACACGCGAGTGAGGGTGTGCTGCAGTCCG
AAGGTGGAAGCAATTTTTGAACTTGTGTCGGGTGCCTCACCACAAGGTGC
GAATGTGTTTGTTGTCCCAACTGCTCCGCCCGTCGTACAAACTGTTTTGA
CGAGCGGGTGTTTTCGTGTATTTAAGTATGCGTGTGTGCGTCATCGAAAG
AGAGAGGCAAATATATAGCAACACTTCCACTGCGATTGCGTGTCTTATCC
CTCATGTGGGATTGGAACACCACGAGCTGGCAGTCGAGTTTGGTATTCGA
AAGCAGTCTATTATTAGCCTCCCCTGTTCCCTCGGCGCGAGCGACAGCAG
CTCAGGCGAATCTACTGTTCATTCAGCAGCAACAGGTTGTCGTTTCCAGT
AGCTTTTCGGGCGTATGATTCTCCGACGTCTGTCTTTGCCGTGTTCGGTG
GCGTCTTGCGAAGCATTGTGGCGAGGCTCTTGAACTCACTCAACTGAACG
TATGTTTCCCTGACCTCGTGTTGAGAGATCATGCGTCGGGCTTCTGCCAC
CATATGAGACAGTCCGTGTGGAGGAGCGCGAAACTGTCAACCCGGGCCAC
CAACTGCTGCAAGATCGTAGATCCGCAGCGCGTGTGGACAGCGTTTCCGT
CGTGGTAAATGCTGGCTGGCTGGCCGGTTGGCTGGCTAGATGCTGGCTGG
CTGTGAGCTGGCTGACTCGCTCGCAAATTGGTCGGCACTAAATAACGCTT
ACCACACGTGCCGATGCGGTGGGGCCGTGCGTGCGGGCGGGGGACAGCAG
GAGAGGCAGGAGCGCATGATCGCGAAGCGAAGGGCGAGGAAGTTCGTTAG
GTTCCTGTACTACGCCTTCAAGGTGGTTGGGGTCGCGGCATGCGTCTTCA
CCTCGGGGCTAAACCTGACCCTCGTGTATATGAGGCAGGACATGAGACGT
GAGAGATTCGATTGAGAAGGCGGTGTGGGGTGGTGCTTGGCTGCTTTCGT
GAACTGGTGCTGTCGTTTTTTAAAAACGAAAGCGTGGCGAGGTTTGGATA
TAGCGGGCTGCTGTACTGCTGCAAATGTTTCAATGCTTGCTCATGTTGTT
GTTGTTGTTGTTGTTGTTGTTGTTTTTGTCGTCGTCTTCGTCGTCGTCGT
TGTCGTCGTCGTCGTTGTCGTCGTCGTTGTGTTGTAGTTGATGATGATGA
TGTCGTCTTTGTCATTGCAACGCATAGTTGAAGTTTTTGCGGTTGCTATT
CTCAATCGCTGCCGCGTCGTTGATATCGCCGCCGTCGTCTGCGTCATCGT
TGTCGTCGTTGTCGGATTTTTTCTTTCTAGTGACGTTTTTGGTTGTCATT
CTGGCTTTGCCCCGCCCCTTTACCTTTCCGATCCATCCTGCCCAAGAGGC
GGCTGTCCAACTACGAAACGTGGCGTGGGGTGAGGTGGTCTATTGCCCAC
CGGTTGGGAGCAGAAAGCGGACCGACCTGCTCCACGGCGGCCGTTGATAT
TTGATATTGCCATGTTCCCCATTCATTCACGTCGCCCCTTTCTTAGCTGA
GCAAGAGGGCACACAGATCGTGATTTAGCACTGCCCTGTCCAAGAGTGCG
ATGAAGCCCAAAACCGGAGGGTACGGGGATACGAAGTAATTATTGGGGGG
TATGCGGACAAGAAATTGTGGAGGGGAGTACACACCTCATAACCATCCCC
TCGAGGAGATTCTCGGAGCCCCCAGCCCTTAGCCCTATGTCAAGTAAAAT
TTGGATAGGAGAACCAACAAAATGCGCGACCGGGGGGTAGGGGGGTAGCA
GTGAAGTGCCGAAATACGATCTGTACAATGTATGCTCTCTTGAGCTCAGC
CCCCCACCCCCTTTCCTGCTGTTCGCGGGCCACCCGACTGAAACCTCACT
CGCATTTGTACGAGCGAAATGATTGGATCAAATAATTTCGGACCTGGGTG
ATACGATAGTTGCCTTGCTGCTCTTGATGCTCTCGTTGCCCCACACCCGC
CTTTGGCCGTTGCACCTCTTTGCTTGGCGGCTCTCTTGTTGTTGCTTAGT
TCAAGACAGGCTCATCCGATCGTATCTGATCTCGTTCGGCGTGGGTGGTG
TGCTGGCGGAGCTGGACACCCCGTTCGCCAAGTCGAACTTTAGGGCGCTC
CAGAAGTGGTGGTTTAAGGCCCCGTTCTACGTGTTGTGAGTTTATCTGGT
GGTTTGCGTCGAGGGTAGATATGAAAATTTGATATGGGGAACTGAAACAC
GGAGAGCATACGGCAATCACGAGGTCACCGGGTGAGGTTTCCCTTCATTA
ATTGATGTTTGACGGGCGAGGTTCAACCCCGCACACCCTTGAGGGGAAAG
CTTACGGCGGTGTGCAGAAAAGAAACAGGGAAAGGGGTTGAGGGGGCGAC
AGCGAGACCGTATGTCATCAGCCGCACTGCTGAAAGTCATTGCGAGTCGA
GCAAGGACGGCAGGAGCTCACGAGGGAGCGGCGAGAAGCTTTCTGTCGCC
ACAATCTCACCGAGCTTCGAGATCCCAACAGTAGGCGACTCATGCAGAAA
ACTACCACACTGCTCTCTGCCGGCAAAACCTCGGCACCGTTTCCCTATTT
CCGCCGTGCATGCAGATACCCAGAGTATTTGTGATTGAAATTATTTCGAC
CCACACCACCGTAGCCTCGTTCGGTCCTCCCTCCTTACACAAAACGCATC
GTTGCCAGCATGGCCTGGCTGTGCTTCGACCCCGACCATTCGCGAGGAAC
GGTGTGGTTCTTCCTCGAGCTCGCCGCGTTCATCGCCCTTCAGGCCATGG
CCGCCATGTCGGTTGTGCTCAACGTGTGCCTGAGGGAGGTGCTGGAGAGG
AGCGGGGCGCTGGGCAAGCGGCGCAGCAAGAGATCGGCGGCGTCACGGCG
GCGACGGCGGCTGGGGATCAAGTCTTCCTCCTTGTCCCGGGGAGCGGGGA
CGGGCGGGGGTGGTGCCGGTACGAGGGGGCGGGCCGGGAGCAGTTCCGCG
AGGATCTCTAGAATGTTTTTGAATGGATGCAGCTGTTGTCTCATGCTTGC
GGCGTGTTGGATAATCGCGATTAATTCATTTTTTCCTTggggGGGGGGGC
GGAGGTGATGTTTGCGGAGCTGTCTACCTTCTCTTCCGCGCCGTGCATCA
TAGTATATTTGTCGCCACCTTGCTCAGAACAGGGTGTGTTTTCTTCCGGG
TGTGCATGACGTAGTCATTGGACCACTGGGCTCGCATCCCTATTAGTGCA
CAGCGGATCTTCGCAGAACCAGTTTTGCGTTCACTTTACATACCACCAGT
GCGAAGCTCCGTAACTCGTTCCGCGAATCGTATATGGTGAGCTACGTTCT
GCGAAGATGGGTCGGCCTAAGGCATGCCAGACTTGCACACAGGTGTGGTG
GGGGGGTCAGTGCCTGCGTTTGGGCACCAGGGGGCGTGACCTTACTCGAA
AGCAGGAGGAAGGACGGGGGATGAATTCCGCAACGAATGAGAGCACGTAT
CTGCTACTTTTCCCTGGGCGGCAGCACATCTCTTGTAACTGACCCCGGAG
CTGACACCCCCTCCCGCTGGTGTATATTTCTTGTGTTTCCGCCCGGCGCA
GGCGGCGCGAGCGCGGCCACCTCGTCCTCGGCGGGCTTGGGTGTCAGCAG
CTTTCGCGATCGGTACGAGTCGCAAACTCGTCGTTCTGCTGCCCCTACTT
GTCCTCTGACGAATTTGGAAGGACCTCGCACGTGATAGGCTGTTCCCGAG
GAAGAGTGTAGTTTATGATTAAGAGTATCTACTAAGCTCTATTTTGCCCC
ACCTTCCCGCGTACTGCCCGTTACAACTCACCGCCCCCCCTTCCCCCTCC
CCTCCCACGCTCTCGGAAGAGATGCACCGGTCCGATAGCGCGGCAAAGGG
TTGGGTTGGCGCCGGGTTGGCGACCGCGGTTTGGAAAACATGCTGCTCAC
TGCATGAGCTAGGCAACCAGGTTTCTTTTTTTCCTCTTTTGTTTTTGGGC
GGTTCCACCATGATGGTGGTCGTGTAAAACCATGTGTGCGGGGTGGAACA
ATCAACGCTTCACATGGGGCATGGTCGCACCACGAAGTAAATGTTGGTGC
ACCCGCGAGGCACTGCCGTGGTATATTCCAAAGGCTGCCTCTGGGGCGAT
TCCAAATAATAAATTGCAGCTCAGTCGAGGCTTCATCCTTGTGCAAGATC
AGTGAGCCTTTGGCCGACCATTCTTGGTAGGATGCTGCCTACCCTTCAGC
GACTCGCCGAATGCATCACGGCGCTTCTCGCTTGGTGAATACAAGAGGCT
TGGCCGGTGAAAAACCAGCAAATCGCTCCGTTCCGGCCTAGTAAGGATGC
GAGGTCGATGGACTTATCAAAACGGCATTCGTGAACTTAGTACACACCCT
ACCGCCCCTCAATACACGAACATGCACACATACACACACACTCACACAGG
GACCGCCGACGACCAAACAGACCGTTGACCTCTCCGACCGGGATCGAGGG
CGGCGGGGGCTTCGGGGCGGAGGACAGAGACCACGCACCGGAGATGGTGC
CCGAGCGGGCGGTTTTGTCCTCCTCGTCGGCCCGCCTAGCATCGCCGACC
GCAAGCAGCACGTACGTCGGCGTCGGTGGCGGTGGCGGTGGCGGCGCGGG
CGTGGGTGGCGGCTTTGCAGCAAGCGGCAGACTGGGGTCGTACGGAGCGA
TCAACAGGAGTGATGCGGGGGGCGCAGGCAGCGTCGGTGTAGGCGTCGGC
GGCGTCGGAGGCGTAGGCGGTGGCGGAGGCCTCGGGGGCGGGATTTCGGG
GAAGATCAAGTGGTGGCTGGACCGAGGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig11:2874003..2879330+

>mRNA_P-fluviatile_contig11.1243.1 ID=mRNA_P-fluviatile_contig11.1243.1|Name=mRNA_P-fluviatile_contig11.1243.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2358bp|location=Sequence derived from alignment at P-fluviatile_contig11:2874003..2879330+ (Porterinema fluviatile SAG_2381)
ATGTCGTGGGCAGAGCCTTCGGACGACATGGACACCCTGAGCGAGTTGCC
TCCAACCGGTAGCAGCAGCATCAAGTCTCACAAGGTCTCGCGTTCTGCTC
CTTCGAAATCTTCGAGACGGGTCGGGGGCGCTTCCAAGTCGGAGCGGAGG
CTTCTGATGGAGGCGAAAGCCGGCGTTGGGGCTGCCATAGCAGAGATGTC
GTGGGCAGAGCCTTCGGACGACATGGACACCCTGAGCGAGTTGCCTCCAA
CCGGTAGCAGCAGCATCAAGTCTCACAAGGTCTCGCGTTCTGCTCCTTCG
AAATCTTCGAGACGGGTCGGGGGCGCTTCCAAGTCGGAGCGGAGGCTTCT
GATGGAGGCGAAAGCCGGCGTTGGGGCTGCCATAGCAGAGGAGAGGCAGG
AGCGCATGATCGCGAAGCGAAGGGCGAGGAAGTTCGTTAGGTTCCTGTAC
TACGCCTTCAAGGTGGTTGGGGTCGCGGCATGCGTCTTCACCTCGGGGCT
AAACCTGACCCTCGTGTATATGAGGCAGGACATGAGACGAGAGGCAGGAG
CGCATGATCGCGAAGCGAAGGGCGAGGAAGTTCGTTAGGTTCCTGTACTA
CGCCTTCAAGGTGGTTGGGGTCGCGGCATGCGTCTTCACCTCGGGGCTAA
ACCTGACCCTCGTGTATATGAGGCAGGACATGAGACTTCAAGACAGGCTC
ATCCGATCGTATCTGATCTCGTTCGGCGTGGGTGGTGTGCTGGCGGAGCT
GGACACCCCGTTCGCCAAGTCGAACTTTAGGGCGCTCCAGAAGTGGTGGT
TTAAGGCCCCGTTCTACGTGTTTTCAAGACAGGCTCATCCGATCGTATCT
GATCTCGTTCGGCGTGGGTGGTGTGCTGGCGGAGCTGGACACCCCGTTCG
CCAAGTCGAACTTTAGGGCGCTCCAGAAGTGGTGGTTTAAGGCCCCGTTC
TACGTGTTCATGGCCTGGCTGTGCTTCGACCCCGACCATTCGCGAGGAAC
GGTGTGGTTCTTCCTCGAGCTCGCCGCGTTCATCGCCCTTCAGGCCATGG
CCGCCATGTCGGTTGTGCTCAACGTGTGCCTGAGGGAGGTGCTGGAGAGG
AGCGGGGCGCTGGGCAAGCGGCGCAGCAAGAGATCGGCGGCGTCACGGCG
GCGACGGCGGCTGGGGATCAAGTCTTCCTCCTTGTCCCGGGGAGCGGGGA
CGGGCGGGGGTGGTGCCGCATGGCCTGGCTGTGCTTCGACCCCGACCATT
CGCGAGGAACGGTGTGGTTCTTCCTCGAGCTCGCCGCGTTCATCGCCCTT
CAGGCCATGGCCGCCATGTCGGTTGTGCTCAACGTGTGCCTGAGGGAGGT
GCTGGAGAGGAGCGGGGCGCTGGGCAAGCGGCGCAGCAAGAGATCGGCGG
CGTCACGGCGGCGACGGCGGCTGGGGATCAAGTCTTCCTCCTTGTCCCGG
GGAGCGGGGACGGGCGGGGGTGGTGCCGGCGGCGCGAGCGCGGCCACCTC
GTCCTCGGCGGGCTTGGGTGTCAGCAGCTTTCGCGATCGGCGGCGCGAGC
GCGGCCACCTCGTCCTCGGCGGGCTTGGGTGTCAGCAGCTTTCGCGATCG
GGACCGCCGACGACCAAACAGACCGTTGACCTCTCCGACCGGGATCGAGG
GCGGCGGGGGCTTCGGGGCGGAGGACAGAGACCACGCACCGGAGATGGTG
CCCGAGCGGGCGGTTTTGTCCTCCTCGTCGGCCCGCCTAGCATCGCCGAC
CGCAAGCAGCACGTACGTCGGCGTCGGTGGCGGTGGCGGTGGCGGCGCGG
GCGTGGGTGGCGGCTTTGCAGCAAGCGGCAGACTGGGGTCGTACGGAGCG
ATCAACAGGAGTGATGCGGGGGGCGCAGGCAGCGTCGGTGTAGGCGTCGG
CGGCGTCGGAGGCGTAGGCGGTGGCGGAGGCCTCGGGGGCGGGATTTCGG
GGAAGATCAAGTGGTGGCTGGACCGAGGAGGACCGCCGACGACCAAACAG
ACCGTTGACCTCTCCGACCGGGATCGAGGGCGGCGGGGGCTTCGGGGCGG
AGGACAGAGACCACGCACCGGAGATGGTGCCCGAGCGGGCGGTTTTGTCC
TCCTCGTCGGCCCGCCTAGCATCGCCGACCGCAAGCAGCACGTACGTCGG
CGTCGGTGGCGGTGGCGGTGGCGGCGCGGGCGTGGGTGGCGGCTTTGCAG
CAAGCGGCAGACTGGGGTCGTACGGAGCGATCAACAGGAGTGATGCGGGG
GGCGCAGGCAGCGTCGGTGTAGGCGTCGGCGGCGTCGGAGGCGTAGGCGG
TGGCGGAGGCCTCGGGGGCGGGATTTCGGGGAAGATCAAGTGGTGGCTGG
ACCGAGGA
back to top