mRNA_P-fluviatile_contig11.1238.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1238.1
Unique NamemRNA_P-fluviatile_contig11.1238.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A6H5KVJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ1_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 4.720e-97
Identity = 161/206 (78.16%), Postives = 174/206 (84.47%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAPMSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGP--AKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKR 643
            MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGC+SSKVDIE+RL SVLQGA M LFVPRSAREELKALGP F+KAY FA+GHCRGLP   N   A  A              E+GP  AKEI+A IGADN+GKYLVASQDENLR+RLRRVPGCPL+FVSRTVL+MEQPSGKSKAEFEKAERKK VG TEEE+RVL++LKKR
Sbjct:    1 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCISSKVDIEKRLTSVLQGAKMHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAGGAXXXXXXXXXXXXXGEKGPDPAKEIIAAIGADNEGKYLVASQDENLRMRLRRVPGCPLVFVSRTVLVMEQPSGKSKAEFEKAERKKAVGTTEEEDRVLAVLKKR 206
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BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A836CFL8_9STRA (Fcf1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFL8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 4.770e-56
Identity = 106/207 (51.21%), Postives = 142/207 (68.60%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAPMSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGPAKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKRERE 652
            MR+TRAKQYRR LRFFRIVYG+ APYKV+LDGNFIH CL+ KV++ +R+ +VLQG    L VP++A +EL+ALG  F+ A  FA   C+    ++ H P   +                 PA++I A I +DN  +Y+VASQDE LR +LR V GCPL+++S+TVLLMEQ SGK+KA FE  ER+KT G+TEEE  ++  L++ ER+
Sbjct:    1 MRITRAKQYRRRLRFFRIVYGVQAPYKVLLDGNFIHACLAHKVEMGERIQAVLQGEKYKLLVPKTAIDELRALGEKFQAAAAFATRSCQ---TITEHAPGKGS-----------------PAEQIEALISSDNPHRYIVASQDEELRAKLRNVAGCPLLYLSKTVLLMEQASGKTKAAFEALERRKT-GVTEEETAIVEQLRQEERQ 186
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BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: D8LKG1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG1_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.660e-47
Identity = 91/128 (71.09%), Postives = 99/128 (77.34%), Query Frame = 2 
Query:  203 MSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGP--AKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAE 580
            M LFVPRSAREELKALGP F+KAY FA+GHCRGLP   N   A                 E+GP  AKEI+A IGADN+GKYLVASQDENLRVRLRR+PGCPL+FVSRTVL+MEQPSGKSKAEFEKAE
Sbjct:    1 MHLFVPRSAREELKALGPEFQKAYNFAIGHCRGLPPPRNENQAXXXXXXXXXXXXXXXXXEKGPDPAKEIVAAIGADNEGKYLVASQDENLRVRLRRIPGCPLVFVSRTVLVMEQPSGKSKAEFEKAE 128
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: W7T2Y0_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 8.040e-34
Identity = 93/240 (38.75%), Postives = 135/240 (56.25%), Query Frame = 2 
Query:   59 RRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAPMSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGPAKEILAT-IGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKRER----------EERARERALQPRKRLKKRASAPNPLSTKKSSR 745
            R+ LRF+RIVYGI+ PYK+++DGNFIH  L  K+DI  RL  +L    ++ + P++  +EL A+GP F  A+++    C  +P             P  K +  + G+    A   + T +G  N  KY+VA+QD+ L+ RLR VP   L+FVSR V LME PS  S+    K E +K   +TEEE  +L+ L+ +E+           E+ ++   + R RLKKRA  PNPLS KKS +
Sbjct:    2 RKWLRFYRIVYGITPPYKILVDGNFIHMALKVKIDIRDRLKKMLLVENLACYAPQAVLDELAAMGPDFRAAHEWVQSCCDLVP------------NPTIKTNHDDSGKNYVSAGAAICTMVGEKNIDKYMVATQDQELKARLRHVPSVALLFVSRAVFLMEAPSTSSRLFSAKQEGEKFRLLTEEERCLLASLRHKEKPVLSQGSSQASEQQQKALTKSRVRLKKRAKGPNPLSVKKSDK 229
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BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A7S2B5Q5_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5Q5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.070e-31
Identity = 93/242 (38.43%), Postives = 128/242 (52.89%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAPMSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGPAKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQP--RKRLKKRASAPNPLSTKKSSRGG 751
            MR+ R K+ R+ L FFR+ +GIS PY+V+LDGNFIH C S K+DI  RL   L G    L+VP     EL+ LG   + A  FA+ +C  +   S    + +AG                    IL  IG  N   YLVASQDE+LR  LR +PG PL+F+ RTVL++E     SK    + E KK V +  +E + + ++++   E ++ +R       +R KKRA   NPLS KK    G
Sbjct:    1 MRLLRGKKARKTLAFFRLNFGISPPYRVLLDGNFIHECTSYKIDILARLGKQLGGEKFMLYVPSCVISELEMLGTNMKPALTFALENCEVVACDSAE--SCSAG--------------------ILGLIGEKNAEGYLVASQDEDLRCELRAIPGVPLMFIKRTVLILESTGHASKTATVQMETKK-VAVVGDESKAMGLVRQIREEAKSAQRLRVEGHSQRPKKRAKGANPLSCKKKKTKG 219
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BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A225W858_9STRA (rRNA-processing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W858_9STRA)

HSP 1 Score: 120 bits (301), Expect = 3.280e-28
Identity = 89/240 (37.08%), Postives = 133/240 (55.42%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAP--MSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGPAKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQPRKRLKKRASAPNPLSTKKSSR 745
            MR  RAK  R+ LR F  + GI  PYKV+LDGNFI  C+  KVD+ +R+   LQ  P     +VPR+A EELK LG A ++AY+ A    +       H       +P  +A           +K I   IG  NDGK++V +Q+  LR  LR+VPG PL++++R+VL+ E+ S  + A   + E+     +   E+R L  +++ + +++  E   Q ++  KKRA  PNPLS KKS++
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVHERVPKYLQVKPHECEFYVPRAALEELKMLGEAMKEAYELA----KSFKVAETH------NQPKNEAMDV--------SKCIQTIIGDKNDGKFVVCTQEVELRKALRQVPGVPLLYLNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEKRKLDQMQE-DNDDQTHE--PQQQRLTKKRAKGPNPLSMKKSTK 219
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A3M6VBL2_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBL2_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.800e-28
Identity = 92/240 (38.33%), Postives = 131/240 (54.58%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAPMS--LFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGP---AKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQPRKRLKKRASAPNPLSTKK 736
            MR  RAK  R+ LR F  + G+ APYKV+LDGNFI  CL  KVD+++R+   LQ  P     +VPR+A EEL+ LG   ++AY+ A                    +  E  D +E+ EE+ P   +K I   IG  ND K++V +Q+  LR  LR VPG PL++++R+VL+ E+ S  + A   + E+     +   E+R L  ++  E EE   E+     + LKKRA  PNPLS KK
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGLKAPYKVLLDGNFIAMCLQMKVDVQERVPKYLQVKPYECEFYVPRAALEELQLLGKTMKEAYELAKSF-----------------KVAESYDQSEK-EEDKPVDVSKAIQIIIGDTNDRKFVVCTQEVELRKALRLVPGVPLMYLNRSVLVFEEISHATLAIVRQEEKTNRAKLDVNEKRKLKQMQAGESEEGQAEKQ----RLLKKRAKGPNPLSVKK 218
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: H3GG59_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG59_PHYRM)

HSP 1 Score: 118 bits (295), Expect = 2.090e-27
Identity = 94/244 (38.52%), Postives = 132/244 (54.10%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAP--MSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGP---AKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQPRKRL-KKRASAPNPLSTKKSSR 745
            MR  RAK  R+ LR F  + GI  PYKV+LDGNFI  C+  KVD+ +R+   LQ  P     FVPR+A EEL+ LG A ++AY  A                    +  E  D  +E  +E P   +K I + IG  ND K++V +Q+  LR  LR VPG PL +++R+VL+ E+ S  + A   + E+   V +   E+R L  +++ E  E     A   ++RL KKRA  PNPLS KK+S+
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFIAMCMQMKVDVRERVPKYLQVKPHECEFFVPRAALEELQMLGEATKEAYDLAKTF-----------------KVAEAYDLQQEDGDEAPVDVSKCIQSIIGDKNDRKFVVCTQEVELRKALRLVPGVPLFYLNRSVLVFEEISRATVAIVRQEEKANMVKLDVNEKRKLDQMQEGENGE-----AQDEQQRLAKKRAKGPNPLSMKKASK 222
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: K3WYS6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYS6_GLOUD)

HSP 1 Score: 115 bits (289), Expect = 1.820e-26
Identity = 93/247 (37.65%), Postives = 129/247 (52.23%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAP--MSLFVPRSAREELKALG----PAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGP---AKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQPRKRLKKRASAPNPLSTKKSSR 745
            MR  RAK  R+ LR F  + GI  PYKV+LDGNF+  C+  KVDI +RL   LQ  P  +  F+ R+A +EL+ LG    PAFE A  F +    G PA             D K DG      + P   +  I   IG  ND K++VA+Q+  LR  LR VPG PL++++R+VL+ E  S  + A   + E+ K   + E E+R L  + + +      +R      RL K+A  PNPLS KK ++
Sbjct:    1 MRYLRAKGIRKALRQFHFLCGIKPPYKVLLDGNFVAMCMQMKVDIHERLPKFLQVKPHEVQYFIARTALDELELLGDAMRPAFEVAQSFTV--VEGNPA-------------DNKTDG------DAPVDVSAVIRGIIGDRNDRKFIVATQEVELRKVLREVPGVPLVYLNRSVLVFEDISRATLAIVRQEEKAKLAKLDENEKRKLDHVTEGDGNNEEEKR------RLTKKAKGPNPLSMKKPTK 220
[Close]
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Match: A0A6A3LC83_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LC83_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.180e-26
Identity = 91/238 (38.24%), Postives = 131/238 (55.04%), Query Frame = 2 
Query:   32 MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLASVLQGAP--MSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPAAAAGRPDEKADGAEEGEEEGPAKEILATIGADNDGKYLVASQDENLRVRLRRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSILKKREREERARERALQPRKRL-KKRASAPNPLSTKK 736
            MR  RAK  R+ LR F  + GI  PYKV+LDGNFI  C+  KVD+ +R+   LQ  P    LFVPR+A EELK LG   ++AY+ A           +   A A  +P+  AD  +       +K + + IG  ND K++V +Q+  LR  LR VPG PLI+++R+VL+ E+ S  + A   + E+     +   E+R L  +++ E  +       + ++RL KKRA  PNPLS KK
Sbjct:    1 MRYLRAKSIRKALRQFHFLCGIKPPYKVLLDGNFIAMCVQMKVDVRERVPKFLQVKPHECELFVPRAALEELKMLGETTKEAYELAQ----------SFKVAEAYDQPE--ADAVD------VSKVVQSIIGDKNDRKFVVCTQEVELRKALRLVPGVPLIYLNRSVLVFEEISRATLAIVRQEEKANMAKLDVNEKRKLEQMQEGEDGQ-----DHEDKQRLAKKRAKGPNPLSVKK 215
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVJ1_9PHAE4.720e-9778.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFL8_9STRA4.770e-5651.21Fcf1-domain-containing protein n=1 Tax=Tribonema m... [more]
D8LKG1_ECTSI3.660e-4771.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7T2Y0_9STRA8.040e-3438.75Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A7S2B5Q5_9STRA3.070e-3138.43Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
A0A225W858_9STRA3.280e-2837.08rRNA-processing protein n=1 Tax=Phytophthora megak... [more]
A0A3M6VBL2_9STRA4.800e-2838.33Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
H3GG59_PHYRM2.090e-2738.52Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
K3WYS6_GLOUD1.820e-2637.65Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A3LC83_9STRA3.180e-2638.24Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2842446..2847834 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score122.1
Seed ortholog evalue4.3e-25
Seed eggNOG ortholog4792.ETI36257
Preferred nameUTP23
KEGG koko:K14773
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0019843,GO:0022613,GO:0030490,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0070013,GO:0070181,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.Fcf1
EggNOG OGs3Q9U5@4776,COG1412@1,KOG3164@2759
Ec32 ortholog descriptionPIN domain-like
Ec32 orthologEc-16_002850.1
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Hectar predicted targeting categorymitochondrion
Exons7
Model size1235
Cds size873
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815472.2985196-UTR-P-fluviatile_contig11:2842445..28424761622815472.2985196-UTR-P-fluviatile_contig11:2842445..2842476Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2842446..2842476 +
1693561955.728831-UTR-P-fluviatile_contig11:2842445..28424761693561955.728831-UTR-P-fluviatile_contig11:2842445..2842476Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2842446..2842476 +
1622815472.4065926-UTR-P-fluviatile_contig11:2847503..28478341622815472.4065926-UTR-P-fluviatile_contig11:2847503..2847834Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2847504..2847834 +
1693561961.360418-UTR-P-fluviatile_contig11:2847503..28478341693561961.360418-UTR-P-fluviatile_contig11:2847503..2847834Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2847504..2847834 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815472.3135874-CDS-P-fluviatile_contig11:2842476..28425571622815472.3135874-CDS-P-fluviatile_contig11:2842476..2842557Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2842477..2842557 +
1693561960.9315536-CDS-P-fluviatile_contig11:2842476..28425571693561960.9315536-CDS-P-fluviatile_contig11:2842476..2842557Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2842477..2842557 +
1622815472.3279912-CDS-P-fluviatile_contig11:2843426..28435071622815472.3279912-CDS-P-fluviatile_contig11:2843426..2843507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2843427..2843507 +
1693561960.946849-CDS-P-fluviatile_contig11:2843426..28435071693561960.946849-CDS-P-fluviatile_contig11:2843426..2843507Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2843427..2843507 +
1622815472.3424149-CDS-P-fluviatile_contig11:2844274..28443581622815472.3424149-CDS-P-fluviatile_contig11:2844274..2844358Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2844275..2844358 +
1693561960.9582634-CDS-P-fluviatile_contig11:2844274..28443581693561960.9582634-CDS-P-fluviatile_contig11:2844274..2844358Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2844275..2844358 +
1622815472.3560557-CDS-P-fluviatile_contig11:2845094..28452741622815472.3560557-CDS-P-fluviatile_contig11:2845094..2845274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2845095..2845274 +
1693561960.9693365-CDS-P-fluviatile_contig11:2845094..28452741693561960.9693365-CDS-P-fluviatile_contig11:2845094..2845274Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2845095..2845274 +
1622815472.3686347-CDS-P-fluviatile_contig11:2845796..28459191622815472.3686347-CDS-P-fluviatile_contig11:2845796..2845919Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2845797..2845919 +
1693561960.97923-CDS-P-fluviatile_contig11:2845796..28459191693561960.97923-CDS-P-fluviatile_contig11:2845796..2845919Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2845797..2845919 +
1622815472.382609-CDS-P-fluviatile_contig11:2846701..28467901622815472.382609-CDS-P-fluviatile_contig11:2846701..2846790Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2846702..2846790 +
1693561960.9888568-CDS-P-fluviatile_contig11:2846701..28467901693561960.9888568-CDS-P-fluviatile_contig11:2846701..2846790Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2846702..2846790 +
1622815472.393536-CDS-P-fluviatile_contig11:2847268..28475031622815472.393536-CDS-P-fluviatile_contig11:2847268..2847503Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2847269..2847503 +
1693561961.3466299-CDS-P-fluviatile_contig11:2847268..28475031693561961.3466299-CDS-P-fluviatile_contig11:2847268..2847503Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2847269..2847503 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1238.1prot_P-fluviatile_contig11.1238.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2842477..2847503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1238.1

>prot_P-fluviatile_contig11.1238.1 ID=prot_P-fluviatile_contig11.1238.1|Name=mRNA_P-fluviatile_contig11.1238.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=291bp
MRVTRAKQYRRHLRFFRIVYGISAPYKVILDGNFIHGCLSSKVDIEQRLA
SVLQGAPMSLFVPRSAREELKALGPAFEKAYKFAMGHCRGLPALSNHPPA
AAAGRPDEKADGAEEGEEEGPAKEILATIGADNDGKYLVASQDENLRVRL
RRVPGCPLIFVSRTVLLMEQPSGKSKAEFEKAERKKTVGITEEEERVLSI
LKKREREERARERALQPRKRLKKRASAPNPLSTKKSSRGGKGGSSGKSAS
GGKVKAASASAAGEGKRVRRKRKKSLQSSGGGTGGSADNV*
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mRNA from alignment at P-fluviatile_contig11:2842446..2847834+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1238.1 ID=mRNA_P-fluviatile_contig11.1238.1|Name=mRNA_P-fluviatile_contig11.1238.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5389bp|location=Sequence derived from alignment at P-fluviatile_contig11:2842446..2847834+ (Porterinema fluviatile SAG_2381)
TCTTTGGCAAGGAGCATCCTAGTCACGTTCAATGAGGGTAACACGAGCGA
AGCAATATCGGAGACATCTTCGGTTCTTTCGAATCGTTTACGGGATTTCT
GCTCCGTACAAGGTGTGTGTCTTGTCCACGAGCTTGAGTTGACAGTCTCG
CGACCAAAACATCTCGGGAGGTTGGACAGGAGCGAGAGATGTAGTTTCAA
GGTTGAGACCGTGTGCAGTAGGCGTCTCACCCTTTCGGTCGGGGTCTCTG
AATGTGTCTGCCATGAGAGTTGTAAATGATATGCCGATCTCACTCCCTCT
CAAAGAACTCGTAGCATGTGGCCCAGACGCTTCACCTTCCCGGGCTTGTC
GTGGCGATCGCACACATGTCCCTCACCCTCAGTAAATCGCAGCGCGAATG
TTATCTCGTCGCGTAAAAGGCTGGTGAAGCATTTTAGAAACTCTCGGAGA
AGCACATCCGCGGTACAGATTCCTAAGGGAAGCGATGCGTCGCAGCTGCT
GGTTCGTGAACGGCTGCTACTGGTCATCAATAGATAGTATTAATATCAAT
AATGCTGTACTACAGTAATTGTTGATTTACGTACGAACAGTTGCTGGTTG
AACAACCTGCATTTGCCTCGTTGTAGTCTATTACGAGCCGATGCTCATTG
ACGATCATCTACCATGTTCACAACCACAAGCTATCGACAATGAGTCTGAA
GGAACTGATGAGAAGAAGTCTTAGAGAATGATTCCCTCGTTCATGTTCAA
GCCCGCCGATTTTGCGCGGGTGTCCCGTGTTGGGGAAACAATCCTTTGGA
ACCTTGTCACGAGGTTTTCAATTTGCCCCGTCCTCACAAGGCTTACAGGT
TGCCCCGTCCTCACACAACCGCATGCGCTCTCACCCCTTTTCTATAGTTT
TCGCGCGTGTCTGCATCCTGCCCATCGCACCCCCTCGTGCTTTTATGGTC
TCTCCACTTCACCTCTGCTCGGAAATCGCAGGTCATCCTCGATGGTAACT
TCATCCACGGCTGCCTGTCGTCGAAGGTCGACATCGAACAGCGGCTGGCC
AGCGTCCTGCAGGTTTGTTTTGTCTACCATCCCGTTCGCATACGGCCGCT
GCCGGTTCCGAGACACTGCTGTGAGTCTCAAAATAAGTGTGATCAGTCAG
GCAAGGGCAAGCACTGCCGTTGTTGTTTCCGAACCTCCCAAGAAACTCCG
TATTCCTTCACCTCAGCTCTGCGGAATGCGTGCGCAGTTTCTTGTTTTCA
TTGGCGTCGCGAGCACACCCCTAACCCCGTGTCCATTGAACACGCTGATT
TGTCCACTGTGACACCTTACACCTACTGACTGATGACTGATAAGATTTTG
ACTATTGTACGTGGAGTCGAAGAACTCGTGCGTTGGACGAAAATCCTGAA
TGCGGCCTTACGCGGCCGTTCCCTGCTGTTCGACGTTTTCCGGGACTCAT
CAACGTGCCCGTCTCATGCACTTATCCCCCTAGCGCGGCGCAGACCGAAT
ACAACGGGCGTCTCAGCGAGAAAACATCGAGCGAGTCAACCCAGCAGTGA
GAGTCTGCATTTCAGTCCCCAAAACGCTTCATGTGTGCCGGTTGCCTTTT
TTTCTCTTTCATCAGGTTCCCCTGTTCCTTCTCAAGGGTTTTTGTTGCAG
ACAACCCCCGCTCCCCCGTGCTTCCCCGCCGCTCCGTCCCGATAACAATC
AGTAGTTTTTGTTCAGATGCGCTGCGGTCGGCGAAATTCAGATGGCCTTC
CTCCCTTGTATCGCGCGCCTCACTTTCTTCGATGTACTTTGTCTCTTCAT
TTATATATGTGTCCGCCTCTGCTCGAAAGGGAGCGCCGATGAGCCTTTTT
GTCCCACGGAGCGCGAGAGAGGAGCTCAAGGCGCTCGGGCCTGCATTCGA
AAAGGCGTACAAAGTGAGCACGGGGTGAGGTTCGAGCGGGCTGTGCACTT
TGGGGGGGCGCAGCTCACGCACACCTGGTGCGCCGCAGCGATCCGAAATA
CCGAAAAGGAATACGCCGTAGACACGGTGCTCCGGCGGGTTGTGTAGGGG
AAAAAGAACAGACGAACGGAGAGAATGTTGTTTTCGCACTTTCACTGGTA
GGAAATGAGCGCTGGCCCGTTTTCACTTGTGTCTGTGCGGGTGGAATGTC
GGGGGGTTGTCGGTCGATCCCTTTCGCCCCACCCCCAAGCGAGAAGCTTA
GCAGGATGGACAGCTTACCCCGCATGGTTTTTGCCCTGATAGCTGCGCAA
GAACCCCGTGCTCTTTGATTATGTTGTTGAAATCAAGATCCTTGGGTGCT
AAGCAATTTTGGATGCTGGGGTTGAGCGTCGAAACTGCTTGGTCGTTGAA
CTGGGTCGTGTTGACGGCCTTTGATCTTGCGCGATGATCGGATGCAGTCA
GCGATGCGTACTTCAGATCGGCCATATCGGTGCAGAAAAGCTTGCACGGT
GACGACGGGGCGCCGTCAAGACGGCACGCTTCTTGAAGTCTCTATTGAAG
GGAGAGTTTCCTGAGCTCTTGTCGTCGGCGCAGGAATAAGTTTGTGGGAT
CGATCAACCCTGCTTTTGGTTCACCTCGACCCGCGCAGGCAGGCCAGTAG
CTCCCCACTCCCCCGACGACCCGCTCTCCTCATTCCTCATGCGCCGCAGT
TCGCGATGGGGCACTGCAGAGGGCTCCCCGCACTCTCGAACCACCCTCCC
GCAGCAGCAGCAGGAAGGCCGGACGAGAAGGCGGATGGGGCAGAGGAGGG
GGAAGAGGAAGGTCCGGCGAAGGAGATCCTTGCGACGATAGGGGCTGACA
ACGACGGGAAATACTTAGTGGCGTCTCAGGTGAAGTTCAAGCGTGGTAAA
TGATGTGTCATGGGCACGTTTCAACCTGTTGGGTGTTTTGCGCGGTGGTT
GATGGTGTGAACGTCCCCGTTGCTTGACAAGCGACGGGGAATCCCCATCG
GCACCGGCCTCAATTGTAGATTTGTTTCTGATAAAACTTGCCATGCCGGG
CATGCCCTCGTTGCACCTGGCAGCCTCTCCCCCACTGCTCAATATGAAGC
ATCGGTTGACCTCAACGAAAACATCCCTCATCTGCCTTTATAAACTTTCG
CCGTTGTGCCCTTTTTGTTTGGAAGCCGAGGTGACATGCGTGTTCACCGT
GGTCGCTAGAGTTTCCCTTACATTTTGGTCCCCGTGAATGCGCGTGATTT
CGCGTGGCGGGTAGTGCCCCCCCCCTCTCCCTCTTTCTCCCCCTCCAATG
CGCCGATCCGGTTATCCCTGTCCGCCCGTTCGTGTGCCGGCGCACTGGGG
GCGAATTTAAACCCCGTACGTGTTGTCTCTTGTCACCTGCCCTCCATGTA
GGATGAGAACCTCCGAGTTAGATTAAGGCGCGTCCCCGGATGTCCTCTGA
TATTCGTGTCGCGGACGGTGCTGCTCATGGAGCAGCCGTCGGGCAAGAGC
AAGGCCGAGTTCGAGAAAGCCGAGGTGAGGAGGAGCGATCGATGACGGCG
ACGTGATCTTTTTGTCGTTGGGGCGATCACCTCCCTCGCGACGAGGGGCT
TCATCGGACATCGATCGCGGGGCAAGGATTCTTCGGGTGTTTCGGTTGAG
TCCTTTCCTTGGATAGCGGCGGCCGTGGTGTTTTGCTATGATGTAGTGGA
GTACCCGCTGGCATTGGTTGTCGTCGTCGCCGCCATCGTGCTCGTCGTGA
TTCTTTGTTTCTCCAGCTGTTGCGAGATACAGGAAGAACGTTGACGGTGT
CGGTTTTCGCAAGGGCCGTTATGGGGTGAGGCTTGCCTTAATCGCCGTTG
CTTGCATGCTTTGCGTTGCTGCTTGTGTTGCCTGGAATCGCCTTTTCCTC
TGTGGTTGGCTCACCGCAGCGCCAAACTGGAAGCCGATCCCATGGCAACG
GCGTTTCCTGTGTGGCCAGATGTACCCGGGCCATCTCGTTTGAGCGAGGG
TGTCCGGTGCCACCGGGGAATTCACCGAACTCCTGTTATGTTCGTTTCAG
CCAAGAGAGGTATTATGTGTGTGCGATTGGGGCTATTGACCGAGCGCCGT
TGTCTCGGAATCTATGTGTTTTTTTTTCATACCCTGATGTCCTCTCGCCC
CTTCTTCTCGGTGTTTGGTCACTCCCTGCTCTCTCCTGAAATATGCATTT
CCGTTCCTCATGTCCGTTTTCCATGCCTCGGTACGGTTGTGCCTGCCCCT
TCCCCCCCCCCTTGCCCAACCCCCATTTGCGTTACAACCGCTGGTGGTGC
GATCAGCGAAAGAAAACGGTGGGCATTACTGAGGAAGAGGAACGGGTGCT
TAGCATTCTCAAGAAGAGGGAGAGAGAGGAGCGCGCGCGAGAGAGGTGAG
TTGCAGGGAGTGTGGCGATGTTGGAAGGGGATAGTTGCTCGTTGTTGCCG
CTCCACCAGGGAGTTCTCTGGTCATAAGTGGAGCATTATATAGCGTCTTA
TTCCAGCCAATCTTGGATCGAGAAGCCGCAGGTTCTCATGGTTTTCATGA
AAAACAGTTCTCACTGTCCCGAAATGGAGAGCGAATGAGAAACAAGAGGA
CGGCTTCAGTTGCTTCCGGCATCGAATTCGATTTATTTCTGTGGTTCATG
CTACCGAGAGGTAAAAGGCCGGCGGGCAGTGCAGAGGTGATATGACACGA
AGAATACAAAAGAATTATCGCAACAAGGCAACGCAACGGGCCCCCTTTCC
GTGGTTGCTCACGCTCACTCGCCTGCCTTCAATGCCCCCCCCCCGTGTCG
CCCTCCCCTTGTGGTCTCGTCGCTGTCTGTTGTATATCTTTCGTCGTATG
TCGTTTACCCATCACATGTGCAGAGCTTTGCAACCACGGAAACGCTTGAA
GAAAAGGGCGTCTGCTCCGAATCCGCTGTCGACGAAAAAAAGCAGTCGCG
GCGGTAAAGGCGGCTCCAGCGGGAAAAGCGCAAGCGGTGGCAAGGTAAAG
GCTGCTTCCGCGTCCGCTGCAGGAGAGGGCAAACGCGTGCGGAGGAAGCG
AAAAAAATCCTTGCAGTCGTCGGGCGGAGGAACGGGGGGGAGCGCGGACA
ACGTGTAGTTGTCGACCCCTTGGCGTGTTCATGAATGTGTGTCCATGTGT
CCTCGGAGGAGGCGATCGTCGGGTCGGGGTGTGCGGGACGGGGAACGCGC
GGTCTTTATTCGTAACGGACTTTGTGTCTCGACCGAGGCTGCCTTAATTT
TGTCGCTTTGGCTCCCGTTCCTGAGAAACACCTTTTGTGAGCGAGGCTCA
TTTCTTGTTTTGTTCCTACCTCCTGAGTGCTGAGCCGCAGCTGAGCCCAA
TTTCCTTCGGGGGGGTTGTTATTTTTTCACAAATCTGAGCCTCGATTTCT
TTCCAACATGTTATATATACATATCTTACGAGCGGGCCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:2842446..2847834+

>mRNA_P-fluviatile_contig11.1238.1 ID=mRNA_P-fluviatile_contig11.1238.1|Name=mRNA_P-fluviatile_contig11.1238.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1746bp|location=Sequence derived from alignment at P-fluviatile_contig11:2842446..2847834+ (Porterinema fluviatile SAG_2381)
ATGAGGGTAACACGAGCGAAGCAATATCGGAGACATCTTCGGTTCTTTCG
AATCGTTTACGGGATTTCTGCTCCGTACAAGATGAGGGTAACACGAGCGA
AGCAATATCGGAGACATCTTCGGTTCTTTCGAATCGTTTACGGGATTTCT
GCTCCGTACAAGGTCATCCTCGATGGTAACTTCATCCACGGCTGCCTGTC
GTCGAAGGTCGACATCGAACAGCGGCTGGCCAGCGTCCTGCAGGTCATCC
TCGATGGTAACTTCATCCACGGCTGCCTGTCGTCGAAGGTCGACATCGAA
CAGCGGCTGGCCAGCGTCCTGCAGGGAGCGCCGATGAGCCTTTTTGTCCC
ACGGAGCGCGAGAGAGGAGCTCAAGGCGCTCGGGCCTGCATTCGAAAAGG
CGTACAAAGGAGCGCCGATGAGCCTTTTTGTCCCACGGAGCGCGAGAGAG
GAGCTCAAGGCGCTCGGGCCTGCATTCGAAAAGGCGTACAAATTCGCGAT
GGGGCACTGCAGAGGGCTCCCCGCACTCTCGAACCACCCTCCCGCAGCAG
CAGCAGGAAGGCCGGACGAGAAGGCGGATGGGGCAGAGGAGGGGGAAGAG
GAAGGTCCGGCGAAGGAGATCCTTGCGACGATAGGGGCTGACAACGACGG
GAAATACTTAGTGGCGTCTCAGTTCGCGATGGGGCACTGCAGAGGGCTCC
CCGCACTCTCGAACCACCCTCCCGCAGCAGCAGCAGGAAGGCCGGACGAG
AAGGCGGATGGGGCAGAGGAGGGGGAAGAGGAAGGTCCGGCGAAGGAGAT
CCTTGCGACGATAGGGGCTGACAACGACGGGAAATACTTAGTGGCGTCTC
AGGATGAGAACCTCCGAGTTAGATTAAGGCGCGTCCCCGGATGTCCTCTG
ATATTCGTGTCGCGGACGGTGCTGCTCATGGAGCAGCCGTCGGGCAAGAG
CAAGGCCGAGTTCGAGAAAGCCGAGGATGAGAACCTCCGAGTTAGATTAA
GGCGCGTCCCCGGATGTCCTCTGATATTCGTGTCGCGGACGGTGCTGCTC
ATGGAGCAGCCGTCGGGCAAGAGCAAGGCCGAGTTCGAGAAAGCCGAGCG
AAAGAAAACGGTGGGCATTACTGAGGAAGAGGAACGGGTGCTTAGCATTC
TCAAGAAGAGGGAGAGAGAGGAGCGCGCGCGAGAGAGCGAAAGAAAACGG
TGGGCATTACTGAGGAAGAGGAACGGGTGCTTAGCATTCTCAAGAAGAGG
GAGAGAGAGGAGCGCGCGCGAGAGAGAGCTTTGCAACCACGGAAACGCTT
GAAGAAAAGGGCGTCTGCTCCGAATCCGCTGTCGACGAAAAAAAGCAGTC
GCGGCGGTAAAGGCGGCTCCAGCGGGAAAAGCGCAAGCGGTGGCAAGGTA
AAGGCTGCTTCCGCGTCCGCTGCAGGAGAGGGCAAACGCGTGCGGAGGAA
GCGAAAAAAATCCTTGCAGTCGTCGGGCGGAGGAACGGGGGGGAGCGCGG
ACAACGTGTAGAGCTTTGCAACCACGGAAACGCTTGAAGAAAAGGGCGTC
TGCTCCGAATCCGCTGTCGACGAAAAAAAGCAGTCGCGGCGGTAAAGGCG
GCTCCAGCGGGAAAAGCGCAAGCGGTGGCAAGGTAAAGGCTGCTTCCGCG
TCCGCTGCAGGAGAGGGCAAACGCGTGCGGAGGAAGCGAAAAAAATCCTT
GCAGTCGTCGGGCGGAGGAACGGGGGGGAGCGCGGACAACGTGTAG
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