prot_P-fluviatile_contig11.1237.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1237.1
Unique Nameprot_P-fluviatile_contig11.1237.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length70
Homology
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BLAST of mRNA_P-fluviatile_contig11.1237.1 vs. uniprot
Match: D8LKG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG3_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.770e-25
Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0 
Query:    2 PAVRAVLYVVLAVVCFWSSSLNIVLGVLLLLTAILYVFAQIVGAALTDGTSVPSDA-PADGQTPFGTFT 69
            PAVRAVLY+ LA+V F S+ LNIVLGVLLLLTAILY FAQIVG+A+TD T+VPSDA PADGQTPFGTFT
Sbjct:   83 PAVRAVLYLCLAIVAFTSNLLNIVLGVLLLLTAILYAFAQIVGSAITDTTTVPSDAAPADGQTPFGTFT 151
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKG3_ECTSI1.770e-2581.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..39
NoneNo IPR availableTMHMMTMhelixcoord: 7..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2839046..2839921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1237.1mRNA_P-fluviatile_contig11.1237.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2837799..2840597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1237.1 ID=prot_P-fluviatile_contig11.1237.1|Name=mRNA_P-fluviatile_contig11.1237.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=70bp
MPAVRAVLYVVLAVVCFWSSSLNIVLGVLLLLTAILYVFAQIVGAALTDG
TSVPSDAPADGQTPFGTFT*
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