prot_P-fluviatile_contig11.1235.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig11.1235.1
Unique Nameprot_P-fluviatile_contig11.1235.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length1861
Homology
BLAST of mRNA_P-fluviatile_contig11.1235.1 vs. uniprot
Match: D8LKF5_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF5_ECTSI)

HSP 1 Score: 842 bits (2176), Expect = 3.840e-283
Identity = 524/796 (65.83%), Postives = 580/796 (72.86%), Query Frame = 0
Query:   12 SSDEDFWAAVAAQAAQEGSSTTPAWRQVGVALPSSSAAVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEATGVCCALCEDKKEGRWVTRCKGPGXXXXXXXXXXXXXXXXXXXXXXXXXXACSIWVHPACAWQASWXXXXXXXXXXXXXXXXXNRERRLPIVFFACPQHDKPATYCSCKREEGEDEDGAEDYIECESCSEWYHFSCEGLDEENPPDIYSCKRCRQLAAKGQKVPAQERRRNKAKTNAYLSEMLANRVMQIQQWVKEVKVLAATDATTAAHASDVEGXXXXXXXXQARYASLKELLARREELEAPLEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSD--------AGDEDDNKVVHGMEGVYSEASALLEAVADESDKAEVAVDAWFDDHPEAYYQKSDDGARLGYWKTSKAPLEAEVGRLEALVARARSARAGXXXXXXXXXXXXXXXRWALKAVGLLFTGGGGSXXXXXXXXXXAVGVGGRKPAFAEVSALLDNAEEAMTTSADRRGRANSAWQHVNDIRNMARQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAIPVDMSEYHELDKVASQWEAWEARALRCAASLEAIPLEELAETVTACPASSPNSXXXXXXXXXXXXXXEEAAALLREAESFPYGIKTSAKDALTRGLGRRGWAQRASAVLSFGAVGIARPSVALTQSLMTEAGKLGLLRASAGAAGDAAATSPLVDKIRRLAEGEGPAQRARELLKAASDGGLSETSTDSELCEAEGVLDSLRSTPVVYPEEEAL 799
            SSDEDFWAAVAAQ A+EGSSTTPAWRQVGVA P+S ++  S                                    EA GVCCALCEDK EGRWVTRCKG G                           C+IWVHPACAWQ                      +RRLP VFFACP HDKPATYCSCKREEGEDEDG EDYIECESC+EWYHFSCEGLDE+NPP+ YSCKRCRQLAAKGQKVPAQERRRNKAKTN YLSEMLAN+VMQIQQWVKEVKVLAAT+  TA        XXXXXXXX ARYAS+K+LLARREELEAPLE  XXXXXXXXXXXXXXXXXXXXXXXXXXXX            AGDE+D KVVHGM GVY+EASALLE+VA+ESD+AE AVD WFD+HPE YY+KSD GARLGYWKTS +PLEAEVG+LE LVA ARSARAG               RW LKAV +L TGG G           A G+    PAF+EVSALLDNA EAM TSADRRGRAN+AWQHVNDIR+MA QWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDA+PVDM EYHEL++VA++WEAWE+RALRCAA+LEA+PLE+LA T+T C  + P                E+A+ LL+EA +F +GIKTSAKDALTR LGR+GWAQRA AV+S  AVGIARPSVALTQSLMTEAGKLGLLRA+ GA       SPLV K++ LAEGEGPA RAR+LLK   +GGLSE S+D+ELC AEGVL +LR+TPVVYPEEE++
Sbjct:    4 SSDEDFWAAVAAQVAKEGSSTTPAWRQVGVAPPTSPSSGDSGHGRAGTRGKAKGPAAAASAAEV-------------EAAGVCCALCEDKSEGRWVTRCKGSGGGTGTRQQQ-----------------TCNIWVHPACAWQNE--GYAMRSIAGSSRLTADGEKRRLPTVFFACPLHDKPATYCSCKREEGEDEDGEEDYIECESCNEWYHFSCEGLDEDNPPERYSCKRCRQLAAKGQKVPAQERRRNKAKTNEYLSEMLANKVMQIQQWVKEVKVLAATN--TAXXXXXXXXXXXXXXXXXARYASVKDLLARREELEAPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVSPLEAEVGQLEQLVASARSARAGPPAAVAAAEDALAAARWVLKAV-VLLTGGAGXAG--------AAGL----PAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVATEWEAWESRALRCAATLEAVPLEDLAGTLTVCSPTPPGENGKAD---------EDASGLLQEAAAFSHGIKTSAKDALTRALGRKGWAQRAVAVISCEAVGIARPSVALTQSLMTEAGKLGLLRAAGGA------VSPLVTKVKALAEGEGPATRARDLLKPVEEGGLSEASSDAELCGAEGVLGNLRATPVVYPEEESV 737          
BLAST of mRNA_P-fluviatile_contig11.1235.1 vs. uniprot
Match: D8LKF7_ECTSI (TFIIS central domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF7_ECTSI)

HSP 1 Score: 696 bits (1797), Expect = 7.850e-215
Identity = 516/920 (56.09%), Postives = 590/920 (64.13%), Query Frame = 0
Query:  960 LVEALRLRAACMQAXXXXXXXXXXXXXXXXXXXXXXXX------GNALTAWSKNAD----DLPAXXXXXXXXXXXXXXXXATRELVAQIVAAGVRALGWHSWRAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSEGRALLNAVFLPGGG--GDGVSGIPALEGAARETAVASPELAALRAAVAAKDAAXXXAWRXXXXX------GGWDRAFPAPPDTAWNSAFAGKSNDASEQERRRVASEWEAWRKSVSGLMGDMDGVLAALAAAAPSLRSALEDHVEARIKAGRWLLAAGGTISGSAPPAEGTKLLPTFESVEGLVQTPPPSS--SPSPYTPGDDSLSPSLVDSHEDXXXXXXXXXXXXXXXXXXAVEA-VLALLKELHAEAASWLQQAKAVLAGVGARAGGEGAASSPAIATAVAADGSAGVIEALLAREVLRAVRQFPEVELLRKALKSQGQWNPQVLAVLAVPLSQPLTAAGVGGGNTWLASARALLAKAPPTLPTGSSHLSLLQWAIAVGETADLMRAATSGGAISFNESRPSLADMEPLSERGKTLLLGGIRVATLLSAVGIAPPSGVAPL-AAPPPVPVSLRLADGPLAALSAIETVTRGVDACRQWIAGATALVSGXXXXXXXLDGASTVRLVQELQANRQLPFAVDGGDSSGAGGGLRSRLAHELSLKAPEHPELAHHLGS-VGGFG-VANGL--DEDD--GMAGVIDINDTGWASNSDLDSGAALTSMDV-----GTVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS---RNGGTLSAKAARMQTGSVARAVPPPLFTGNAAPTTRGSRNQRTSPFNLKACSSCKKGRTSAIKCRVDLRHWEDHDWTDPPSRPWIMPDGFVEWIARVDCGPDGETPGSPRNMATAAAAASVRDAA 1843
            L EALR RAAC+QAXXXXXXXXXXXXXXXXXXXXXXXX      G+ L+AWSK+ D    +      XXXXXXXXXXXX + RELVAQIVAAGVR+LGWHSWR                                    TL++G ALL+AV  PG G  G G   +  LEGAA  TA AS E AALR AVAAKDAA   AW+           GGW RAFPAPP T W  A A  +      +RR V +EWE WRKS SGL+  M+GVLA +  AAPSLRSALE  ++ARI+AGRWL+A+GG +     P  G   +PT +S E LVQTPPP S  + +PY PGDD+L        +D                  AV A VLA L+EL  EA+SWL +A+ +LAG G      G       A     DGSA  +EALLAR+V+RA+ Q PE +LLR AL+S GQW+P+VLA+L VP++      GV  G  WLA AR LLA+AP TLP GSSHL+LL+W IAVGETA +M AAT+GGA+SFNESRP+  DMEPL+ERGKTLLLGG  VATLLSAVGIAPP+GV PL AA PP P+SLRL DGPL ALS +E VTRGVDACRQW+AGATAL S   XXXXXLDGAS+ RLVQELQANRQLP+AVDG   +G GGGLR+ LAHELSLKAPEHPELAHHLGS VG FG VANG+  DEDD  GMAG ID++D GWAS+SDLDS  A+ ++DV      T AP                            XX     RNGGT+SA+AA +QT SVARAVPPPLFT  AAPTTRGSRNQRTSPFNLKACS+CKKGR S                                    VDCGPDGE PGSP N  TAAAAA+VRDAA
Sbjct:    2 LTEALRWRAACLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNLSAWSKSGDTTGQEKKGMPTXXXXXXXXXXXXGSGRELVAQIVAAGVRSLGWHSWRV--------------LAARAAFNALPGSNPSPPAKPTLADGHALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAWKWRDAATSGSGGGGWGRAFPAPPSTTWKEAVAVAAGGG---QRRHVVAEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALEVQLQARIEAGRWLVASGGVLF----PTGGR--IPTLDSTETLVQTPPPPSFSATAPYKPGDDALPVG-----DDPASDGASVAAAANQRQSAAVFADVLAGLQELRGEASSWLTEARGLLAGAG------GXXXXXXXAAVAMTDGSAKAVEALLARDVVRAM-QLPEEKLLRDALQSHGQWDPKVLAILTVPVA---AGGGVDSGG-WLAPARTLLAQAPTTLPPGSSHLALLRWTIAVGETAQVMLAATTGGAMSFNESRPAFTDMEPLAERGKTLLLGGTGVATLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDACRQWVAGATALASPGGXXXXXLDGASSARLVQELQANRQLPYAVDG---AGFGGGLRATLAHELSLKAPEHPELAHHLGSSVGSFGGVANGIVDDEDDAEGMAGAIDMSDVGWASSSDLDS--AMAAIDVVGAATTTEAPPPAPAPAVYPLAREQHRHSGATPAGSRGXXXXXXXRNGGTISARAAGLQTASVARAVPPPLFTNPAAPTTRGSRNQRTSPFNLKACSACKKGRIS------------------------------------VDCGPDGERPGSPHNARTAAAAAAVRDAA 841          
BLAST of mRNA_P-fluviatile_contig11.1235.1 vs. uniprot
Match: A0A6H5KV96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV96_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 4.430e-67
Identity = 196/277 (70.76%), Postives = 208/277 (75.09%), Query Frame = 0
Query:  278 MQIQQWVKEVKVLAATDATTAAHASDVEGXXXXXXXXQARYASLKELLARREELEAPLEDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGSD-------AGDEDDNKVVHGMEGVYSEASALLEAVADESDKAEVAVDAWFDDHPEAYYQKSDDGARLGYWKTSKAPLEAEVGRLEALVARARSARAGXXXXXXXXXXXXXXXRWALKAVGLLFTGGGGSXXXXXXXXXXAVGVGGRKPAFAEVSALLDNAEEAMTTSADRRGRANSAWQHVNDIR 547
            MQIQQWVKEVKVLAAT+  TA        XXXXXXXX   YASLKELLARREELEAPL   XXXXXXXXXXXXXXXXXXXXXXXXXXXX           AGDE+D KVVHGM GVY+EASALLE+VA+ESD+AE AVD WFD+HPE YY+KSD GARLGYWKTS   LEAEVG+LE LVA ARSARAG               RW LKAV LL  G GG   XXXXXXXX  G+    PAF+EVSALLDNA EAM TSADRRGRAN+AWQHVNDIR
Sbjct:    1 MQIQQWVKEVKVLAATN--TAGAXXXXXXXXXXXXXXXXXYASLKELLARREELEAPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVGTLEAEVGQLEKLVATARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGGGAPXXXXXXXXXXGL----PAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIR 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKF5_ECTSI3.840e-28365.83PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LKF7_ECTSI7.850e-21556.09TFIIS central domain-containing protein (Fragment)... [more]
A0A6H5KV96_9PHAE4.430e-6770.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 311..341
NoneNo IPR availableGENE3D2.60.120.650coord: 190..332
e-value: 7.9E-12
score: 46.9
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 620..1855
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 195..244
e-value: 2.3E-9
score: 47.1
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 196..243
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 193..246
score: 8.965
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 188..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2804264..2825566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1235.1mRNA_P-fluviatile_contig11.1235.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig11 2804264..2825567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig11.1235.1 ID=prot_P-fluviatile_contig11.1235.1|Name=mRNA_P-fluviatile_contig11.1235.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1861bp
AADTALQQQAPSSDEDFWAAVAAQAAQEGSSTTPAWRQVGVALPSSSAAV
GSSSSPSCSGSGGGGARTGTRGKAKGAAAAAAAAAAAEEATGVCCALCED
KKEGRWVTRCKGPGGGGGGGGGGGGGGGGSGSRTTQQQQQACSIWVHPAC
AWQASWWWWSRLRGGGGPRKKQRNRERRLPIVFFACPQHDKPATYCSCKR
EEGEDEDGAEDYIECESCSEWYHFSCEGLDEENPPDIYSCKRCRQLAAKG
QKVPAQERRRNKAKTNAYLSEMLANRVMQIQQWVKEVKVLAATDATTAAH
ASDVEGAAASAAAAQARYASLKELLARREELEAPLEDEEEEEGGGHGRGK
GGKGKGGGGGGGGSSSGGSDAGDEDDNKVVHGMEGVYSEASALLEAVADE
SDKAEVAVDAWFDDHPEAYYQKSDDGARLGYWKTSKAPLEAEVGRLEALV
ARARSARAGPPAAVAAAEDALAAARWALKAVGLLFTGGGGSGGGAGGGEG
GAVGVGGRKPAFAEVSALLDNAEEAMTTSADRRGRANSAWQHVNDIRNMA
RQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAIPVDMSEYHELDKVAS
QWEAWEARALRCAASLEAIPLEELAETVTACPASSPNSSGGGGGDQGQRQ
ADEEAAALLREAESFPYGIKTSAKDALTRGLGRRGWAQRASAVLSFGAVG
IARPSVALTQSLMTEAGKLGLLRASAGAAGDAAATSPLVDKIRRLAEGEG
PAQRARELLKAASDGGLSETSTDSELCEAEGVLDSLRSTPVVYPEEEALA
LRLDALRWNEAASKGLKGVITHQQLLSLHEQITGSEQLESMLEGFKSCMP
MYTKVSKVKRWQQRAQKLLKAARSKRTAGAAATGEGQAGLRLRIEEALAE
IEGELQVSGVPESVELSGYVQEAVAWENEVRRAGPASPTLKEELLSLAER
GDGVVSPPQLVEALRLRAACMQAAATTASATTPPEEAAGKAATLLAAGNA
LTAWSKNADDLPAGGGGNGGGVASISAAAATRELVAQIVAAGVRALGWHS
WRAQAARAAFTAPAPPAAAATAAAATTGDAPPPKPPKPTLSEGRALLNAV
FLPGGGGDGVSGIPALEGAARETAVASPELAALRAAVAAKDAAVAAAWRR
RKGGGGWDRAFPAPPDTAWNSAFAGKSNDASEQERRRVASEWEAWRKSVS
GLMGDMDGVLAALAAAAPSLRSALEDHVEARIKAGRWLLAAGGTISGSAP
PAEGTKLLPTFESVEGLVQTPPPSSSPSPYTPGDDSLSPSLVDSHEDDED
TVVAAAAAVQQQSSAAVEAVLALLKELHAEAASWLQQAKAVLAGVGARAG
GEGAASSPAIATAVAADGSAGVIEALLAREVLRAVRQFPEVELLRKALKS
QGQWNPQVLAVLAVPLSQPLTAAGVGGGNTWLASARALLAKAPPTLPTGS
SHLSLLQWAIAVGETADLMRAATSGGAISFNESRPSLADMEPLSERGKTL
LLGGIRVATLLSAVGIAPPSGVAPLAAPPPVPVSLRLADGPLAALSAIET
VTRGVDACRQWIAGATALVSGGGGGGGGLDGASTVRLVQELQANRQLPFA
VDGGDSSGAGGGLRSRLAHELSLKAPEHPELAHHLGSVGGFGVANGLDED
DGMAGVIDINDTGWASNSDLDSGAALTSMDVGTVAPPPPVLASPAAAASA
AKLERQGSGGGGGGGGVSRNGGTLSAKAARMQTGSVARAVPPPLFTGNAA
PTTRGSRNQRTSPFNLKACSSCKKGRTSAIKCRVDLRHWEDHDWTDPPSR
PWIMPDGFVEWIARVDCGPDGETPGSPRNMATAAAAASVRDAALAHRAAA
AAAGAEPGRAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD