prot_P-fluviatile_contig6.12362.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12362.1
Unique Nameprot_P-fluviatile_contig6.12362.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length234
Homology
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: D7G3A4_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3A4_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 4.670e-128
Identity = 188/235 (80.00%), Postives = 209/235 (88.94%), Query Frame = 0
Query:    1 MRTTLASFAALWAGAAAFV-PVPTNTARPSSLG-MAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPYVG 233
            M+TTLAS AAL  GA AF  P+P + A  S  G ++ A SKAIPFMPQPENLDG+ PGDIGFDPLGLS IDIDFSEFIVPGAAVMR EGVP KSPVDTLYWMRE+ELKHGR+AQLAVVGWILVDQG+RFPG++YAAI+QSV AHDPMV+SGNMT++LL VFLLEM+GGAA+FGAASGSGRQPG+FGLDP NLTSNP KKARYEL+E+QHCRLAM AIGGIATQ+VLNGG FPY G
Sbjct:    1 MKTTLASLAALVGGACAFTAPMPMHRAARSPAGALSMANSKAIPFMPQPENLDGTMPGDIGFDPLGLSKIDIDFSEFIVPGAAVMREEGVPSKSPVDTLYWMREAELKHGRVAQLAVVGWILVDQGVRFPGDQYAAISQSVGAHDPMVASGNMTLLLLVVFLLEMVGGAAIFGAASGSGRQPGDFGLDPLNLTSNPAKKARYELNEIQHCRLAMSAIGGIATQAVLNGGDFPYTG 235          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A836CGA6_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA6_9STRA)

HSP 1 Score: 236 bits (603), Expect = 2.270e-75
Identity = 131/223 (58.74%), Postives = 159/223 (71.30%), Query Frame = 0
Query:   13 AGAAAFV---PVPTNTARPSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPYV 232
            AGA+AF    P+       SS+ M A KSK+IPF PQP  LDGS PGD+GFDPLGL+SID D++++IVP  A MR    P    VDTLYWMRE+ELKH R+A LAVVGW+ VD GLR PG KY  ++ ++ AHD MVS GNM VML    LLE+I GAA+F AA GSGR+PG+F LDP  L  +  K ARY+LSEV++ RLAM A  GIATQ+VL G +FPY+
Sbjct:   12 AGASAFQAASPLKGAVRSSSSMSMMA-KSKSIPFAPQPAALDGSLPGDVGFDPLGLTSIDFDWAKWIVPARASMRKGDEP--LVVDTLYWMREAELKHCRVAMLAVVGWLAVDMGLRLPGTKYMGLS-AISAHDAMVSGGNMVVMLHFALLLELINGAAIFAAAQGSGRKPGDFCLDPLGLAKDSAKSARYQLSEVKNGRLAMLAFSGIATQAVLTGHSFPYL 230          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A7S2RV11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV11_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.460e-64
Identity = 119/221 (53.85%), Postives = 143/221 (64.71%), Query Frame = 0
Query:   15 AAAFVPVPTNTARPSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSID-IDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKA-RYELSEVQHCRLAMFAIGGIATQSVLNGGAFPYVG 233
            A AF P     AR ++  MAA KS A+PFMP+P  LDGS PGD+GFDPLG SSID +   + I P A++  +E      P+ TLYWMRE+ELKHGRI  LAV G+  VD G RFPG KYA +  SV AHD MV+SGNM  + LAV L+E+I   A+  AA GSGR PG+F LDP   T   EK+  R  L+EV H RLAM A  G+ TQ+V  G  FPY G
Sbjct:   14 AVAFAPAARRAARLTTT-MAAEKSAALPFMPKPSALDGSMPGDVGFDPLGFSSIDPVKLPQIIPPAASMATSE------PLPTLYWMREAELKHGRICMLAVTGFAAVDMGFRFPGAKYADLT-SVTAHDAMVASGNMGFLFLAVALIELISSVALVEAAQGSGRVPGDFALDPMKFTQKNEKETERLRLAEVTHARLAMLAFSGMVTQAVAVGDKFPYQG 226          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: W7UAI7_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAI7_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.130e-58
Identity = 101/197 (51.27%), Postives = 131/197 (66.50%), Query Frame = 0
Query:   35 AAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPY 231
            AAKSKA+PF+  P+ LDGS P D+GFDPL LS ID DF+  +VP       +    ++ +  L W RE+E+KHGR A LAV+GW+ VD GLR P  KYA    +V AHD  V SG+MTV LLA+  LE++ GA ++  + GS R  G+F  DP  L  +P K ARY++SE+++ RLAM A GGIATQ+VL  G FPY
Sbjct:   32 AAKSKAVPFLEAPKALDGSLPADVGFDPLNLSDIDFDFTYLMVP------TKWDESRTGLSALKWFREAEIKHGRFAMLAVLGWVAVDMGLRLPVAKYAGY-NAVQAHDVFVKSGDMTVGLLAIGFLEVVMGAGIYEMSKGSDRAAGDFSFDPLGLGKDPAKYARYQVSEIKNGRLAMLAFGGIATQAVLTNGGFPY 221          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A6V1NRI4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRI4_HETAK)

HSP 1 Score: 189 bits (481), Expect = 1.460e-56
Identity = 102/207 (49.28%), Postives = 140/207 (67.63%), Query Frame = 0
Query:   28 PSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTS-NPEKKARYELSEVQHCRLAMFAIGGIATQSVLNG-GAFPYV 232
            PS+L +   KSK++PF+  P +LDGS  GDIGFDPL LS I  DFS+ +VP     +  G P  + + TLYWMRE+E+KHGR+A LAV+G + VD G R PG  +A +  ++ AHD MV+ G M ++LLA    E++GGAAV+ AA GSGR+PG+F LDPF+L   +P +K  ++  E+++ RLAM  I GI TQ+ L G   FPY+
Sbjct:   35 PSALHL---KSKSLPFLDAPGSLDGSFAGDIGFDPLRLSEIPFDFSQLVVP----RQFSGRPSSATLATLYWMREAEVKHGRVAMLAVLGCVAVDLGARLPGAAFAGVRDALGAHDVMVARGPMALLLLAAGAAEVLGGAAVYEAAKGSGREPGDFQLDPFSLVKGDPVRKKDFQTKEIKNGRLAMIGISGILTQAGLEGQSVFPYL 234          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: D7FWB9_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB9_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.440e-52
Identity = 114/239 (47.70%), Postives = 137/239 (57.32%), Query Frame = 0
Query:    1 MRTTLASFAALWAGAAAFVP---VPTNTARPSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPE---KKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPYVG 233
            M  TLA   A+ A A+AFVP   +P   +  S + M A KSK++PFMPQP  LDG+  GD GFDPLG       FS FI                P+D   ++RE+ELKHGRI QLAVVG+   D G R PG ++A    S+ AHD  V++G M  +LL V   E I   AV     GSGR PG+FG DP NL S PE   KKA  EL E+ HCRLAM A GG+ TQ+VL    FPY G
Sbjct:    1 MMNTLACSLAVLASASAFVPPAQLPRVASSNSGMSMQATKSKSLPFMPQPAKLDGTMAGDAGFDPLG-------FSNFI----------------PLD---FLREAELKHGRICQLAVVGFAATDLGFRLPGAEHAVA--SIAAHDAAVATGAMPQILLWVSAFEAISTVAVIQMLEGSGRIPGDFGFDPSNLYSRPELAKKKADMELKEITHCRLAMCAFGGMVTQAVLTNSGFPYTG 211          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: F0YCE3_AURAN (Uncharacterized protein LHC26 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCE3_AURAN)

HSP 1 Score: 177 bits (448), Expect = 4.280e-52
Identity = 94/203 (46.31%), Postives = 130/203 (64.04%), Query Frame = 0
Query:   29 SSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPY 231
            +SL    AKSK++PF+  P  LDG+ PGD+GFDPL  + +D + +E I+P  ++   E +P       +YWMRE+ELKHGR+  LA+VG++ VD G+ FPG +Y  ++ S+ AHD MV+SGNM  MLLAV +LE++    V  AA GSGR+ G+F  DP   T   +    +E +E+QH RLAM A  G+ TQS L    FPY
Sbjct:   23 TSLTRCDAKSKSMPFLECPAALDGTLPGDVGFDPLRFTDLDWNMAEVIIPAKSISATESLP------MVYWMREAELKHGRLCMLAIVGYLTVDAGIHFPGARYEGLS-SLQAHDAMVASGNMGFMLLAVGVLELLSMVGVVQAAKGSGRKAGDFSWDPLYFTQGAKADFFFE-AEIQHARLAMLAFSGLVTQSALLEKGFPY 217          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A6U4L863_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L863_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.570e-50
Identity = 108/259 (41.70%), Postives = 142/259 (54.83%), Query Frame = 0
Query:    5 LASFAALWAGAAAFVPVPTNTAR-PSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSI-DIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNL-TSNPEKKARYELSEVQHCR-----------------------------LAMFAIGGIATQSVLNGGAFPY 231
            LA  A   AGAAAF   P    R P  +      SK++PF+   +NLDG+  GD  FDP+G S+I D D+S  +VP       EG+       TLYWMRE+ELKHGRI  LA +GW+  D G RFPGE Y+ I+ ++ AHD MV +GNM  +L  +F++E++ GAA++ AA GSGR PG++G DP  L   N  KKA Y L E+++ R                             LAM    GI TQ+ L G +FPY
Sbjct:   24 LACLALAIAGAAAF-QAPRKAGRTPVRMQAREGMSKSVPFLKTNKNLDGTMVGDADFDPMGWSNIEDFDWSGIVVPAWFNKEREGI------STLYWMREAELKHGRICMLATLGWVATDLGFRFPGEAYSGIS-TLAAHDAMVKNGNMGFLLTVIFVIEILSGAAIYEAAKGSGRAPGDYGFDPLGLGRGNDAKKADYALKEIKNARCVPSTILDPNACKSSSHPPTSPSPPSFSSLAMLGFSGIVTQAALTGHSFPY 274          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A7S2S869_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S869_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.790e-47
Identity = 100/230 (43.48%), Postives = 129/230 (56.09%), Query Frame = 0
Query:    2 RTTLASFAALWAGAAAFVPVPTNTARPSSLGMAAAKSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGGAFPY 231
            RT LA   AL A  A     P       ++ M AAKS AIPF+P+P  LDGS  GD+GFDPLG+S                       +  P+D   ++RESELKHGRI  LAV G+   D G + PGE++     S DAH+  VS+G MTVM  A+F LE I G A+  + +GSGR  G++GLDP  L+  P+K A  ++ E+ H RLAM A  G+ TQ+VL    FPY
Sbjct:   12 RTVLALALALLAAPAVAFQGPVRATHRGAMKMMAAKSAAIPFLPKPAELDGSLIGDVGFDPLGVS-----------------------DWMPLD---YLRESELKHGRICMLAVTGFAATDLGFKLPGEQFNVA--SADAHNMAVSAGYMTVMGCAIFALECISGLAIQESLAGSGRAAGDYGLDPLKLSDKPDKMADMQMKEITHARLAMLAFSGMVTQAVLFDKGFPY 213          
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Match: A0A6J4B0A4_9STRA (Fucoxanthin chlorophyll a/c protein 8 n=2 Tax=Chaetoceros gracilis TaxID=184592 RepID=A0A6J4B0A4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.910e-45
Identity = 98/206 (47.57%), Postives = 127/206 (61.65%), Query Frame = 0
Query:   37 KSKAIPFMPQPENLDGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWMRESELKHGRIAQLAVVGWILVDQG----LRFPGEKYAA--IAQSVDAHDPMVSSGNMTVMLLAVFLLEMIGGAAVFGAASG-SGRQPGEFGLDPFNLTS--NPEKKARYELSEVQHCRLAMFAIGGIATQSVLNGG--AFPY 231
            +SKA+PF+P+  NLDGS PGD+GFDP  LSSI  DFS FI P       +G+P      TLYWMRE+ELKH R+A LA  GW+  D      LRFPGE Y+   I  + +AH+ +VS G+M  +LLAV  +E   GA +   A G S R+ G+F LDP +     + E+  R +  E+ + RLAM A GG+ATQ+ L GG  AFPY
Sbjct:   47 RSKAVPFLPRAVNLDGSLPGDVGFDPFYLSSIPKDFSGFIQPPQ--WEEKGIP------TLYWMREAELKHCRVAMLAWFGWLATDGAFGVTLRFPGEIYSVENIPTAYEAHNALVSQGSMGFLLLAVGFIEFCTGAVLVEVAKGASDREAGDFKLDPLSFLKGKSEEEIKRMKTREIANGRLAMLAFGGVATQTALEGGNHAFPY 244          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3A4_ECTSI4.670e-12880.00Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A836CGA6_9STRA2.270e-7558.74Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7S2RV11_9STRA4.460e-6453.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7UAI7_9STRA1.130e-5851.27Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A6V1NRI4_HETAK1.460e-5649.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FWB9_ECTSI2.440e-5247.70Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
F0YCE3_AURAN4.280e-5246.31Uncharacterized protein LHC26 n=1 Tax=Aureococcus ... [more]
A0A6U4L863_9STRA2.570e-5041.70Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2S869_9STRA1.790e-4743.48Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A6J4B0A4_9STRA7.910e-4547.57Fucoxanthin chlorophyll a/c protein 8 n=2 Tax=Chae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 47..222
e-value: 1.9E-33
score: 116.3
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10coord: 41..231
e-value: 3.4E-35
score: 123.5
NoneNo IPR availablePANTHERPTHR21649:SF7CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTICcoord: 34..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..233
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.768
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 34..226
NoneNo IPR availableTMHMMTMhelixcoord: 210..232
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
IPR001344Chlorophyll A-B binding protein, plantPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 34..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:393560..398036 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12362.1mRNA_P-fluviatile_contig6.12362.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 393560..398861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12362.1 ID=prot_P-fluviatile_contig6.12362.1|Name=mRNA_P-fluviatile_contig6.12362.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=234bp
MRTTLASFAALWAGAAAFVPVPTNTARPSSLGMAAAKSKAIPFMPQPENL
DGSSPGDIGFDPLGLSSIDIDFSEFIVPGAAVMRAEGVPEKSPVDTLYWM
RESELKHGRIAQLAVVGWILVDQGLRFPGEKYAAIAQSVDAHDPMVSSGN
MTVMLLAVFLLEMIGGAAVFGAASGSGRQPGEFGLDPFNLTSNPEKKARY
ELSEVQHCRLAMFAIGGIATQSVLNGGAFPYVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR023329Chlorophyll_a/b-bd_dom_sf
IPR001344Chloro_AB-bd_pln