prot_P-fluviatile_contig6.12361.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12361.1
Unique Nameprot_P-fluviatile_contig6.12361.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length371
Homology
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: D8LFC3_ECTSI (Diaminohydroxyphosphoribosylaminopyrimidine deaminase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFC3_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 2.560e-86
Identity = 198/394 (50.25%), Postives = 221/394 (56.09%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLHCPLDGSSTGS----ESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPPMTLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISED-----AAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRALVRRRPRRGEIGGADTSAEGXXXXXXXXXXXXXXXXXXXXXXXXPSLEEEEK-------------------EALRVIRRLSGREGVRVRRSGRGIPSEAGARSFIEVLLPAPEVDTPA 366
            MVDPDPRTAGSGLRRLADAGIDVSVGVEGAAC ALNS FVHRVSHKSCYGVLHC LDG+ + S     S   V       RE D L VPP   ++ EYDAIVVEG  GV KL AC SALPP  LRVVIVG             GL+ EL GVLES L  +SPERT+VF+PA A Q       G  RA+L +RG+++VD+  P     P           +S+ E+      AAA   AAA AVSREL+RRGML  AWEVGP MAAV    GH+QRAL+RRR   G  GGAD  AEG                          +    K                     LRV+RRLSGREGVRVRR G   P    A S IEVLLP   +  PA
Sbjct:  168 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACHALNSAFVHRVSHKSCYGVLHCCLDGACSRSIPQSGSRAGVGGLQDTAREND-LAVPPGGRNFEEYDAIVVEGRSGVAKLEACNSALPPTALRVVIVGAGSDE--------GLEIELAGVLESRLLEESPERTVVFMPATAGQDGDGSLTGSVRASLMSRGIAVVDFRTPDTPTPP----------ASSLDEERPETATAAATMAAAAGAVSRELFRRGMLSAAWEVGPAMAAVVLRAGHVQRALIRRRRIPGG-GGAD--AEGTFANAPAAEAAVAAARVGAHVGPNELVSGSGKGVAGGSVKEXXXXXXXXXXXVLRVMRRLSGREGVRVRRGGGIFPWGPDAESCIEVLLPTTPLKPPA 539          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A836CAQ1_9STRA (CMP/dCMP-type deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.630e-30
Identity = 97/213 (45.54%), Postives = 121/213 (56.81%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRV---SHKSCYGVLHCPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLA--ACLSALPPMTLRVVIVG-------GSPSXXXXXXXXXGLDAELGGVLESPLWTDSPE-RTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPA 200
            MVDPDPRTAG GLRRLA AG+DV+VG EG AC+ LN+PFVHR+   +     GVLH     S  G+ +         +L  +D L +P D   Y   DA+VVEG +GV +LA  A  +ALPP  +RVV+V        G P XXXXXXXXX      GG  +S  W  +P   T V V   +     + +    RAALEARGV++VD   PPA
Sbjct:  135 MVDPDPRTAGGGLRRLAQAGVDVAVGAEGGACRRLNAPFVHRIVRGARAGALGVLHAVAQRSGDGTGA--------RLLAPSDTLAIPADHEVYAMCDALVVEGRRGVAQLAGAAAAAALPPTCMRVVLVAQVTAAADGEPXXXXXXXXXXXXXXXXGGTEDSAAWGQAPPGMTAVLVVGASSDTAEDTA---VRAALEARGVTVVDVPLPPA 336          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: UPI001745ECF9 (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001745ECF9)

HSP 1 Score: 78.2 bits (191), Expect = 2.180e-12
Identity = 89/290 (30.69%), Postives = 119/290 (41.03%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEY-----DAIVVEGPQGVRKLAACLSALPPM--TLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRALVRRRPRRGEIGGA 281
            MVDP+P+ +G+G+ RL  AGI+V+VGVE AACQ+LN  FV+R+ H+   G+L     LDG    +    A                 PD  S+V       DA+V+ G   VR+    L++       LRVV                 +   L   LE+ LW  +   T+VF        R        R AL  +GV ++         A PR SPA                       V + L  RG L   WE G  +AAVA   G IQ+ L    P+   IGGA
Sbjct:   95 MVDPNPKVSGAGIARLRQAGIEVTVGVEEAACQSLNEAFVYRILHQRPLGILKYAMTLDGKIAATTGHSA-------------WVTSPDSRSFVHRLRAGCDAVVIGG-NTVRRDNPLLTSHGNSHDPLRVV-----------------MSRTLNLPLEAQLWQTAVAPTVVFTEQATSPER--------RQALIRQGVEVI---------ALPRLSPA----------------------EVMQNLGDRGFLSVLWECGGTLAAVAIAEGAIQKVLAFIAPK--IIGGA 312          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: UPI001A0E5AFA (Bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Leptolyngbyaceae cyanobacterium JSC-12 TaxID=864702 RepID=UPI001A0E5AFA)

HSP 1 Score: 77.8 bits (190), Expect = 3.140e-12
Identity = 84/289 (29.07%), Postives = 113/289 (39.10%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPPMT-LRVVIVGGSPSXXXXXXXXXGLDAELGGVLESP----LWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRALVRRRPRRGEIGGAD 282
            M+DP+P+ AGSG+ +L  AGI+V++GVE AACQ LN  FVHR+  +  +G+L     LDG         A   + A   E  +L            DAI+V G    +      S  P  T LRVV+                        LE P    LW  S   T+VF    A            +A L + GV +++  P          +P                      T V + LY RG L   WE G  +AA A   G +Q+      P+   IGGAD
Sbjct:  103 MIDPNPKVAGSGIAKLQKAGIEVTLGVEEAACQELNEAFVHRIEQRQPFGMLKYAMTLDGKIAARTGHSAWVSSDAARAEVHKLRA--------GCDAIIVGGNTVRQDNPLLTSRRPDRTPLRVVMTRS---------------------LELPSNANLWNTSMAPTLVFTQPDA--------NSALQAKLRSLGVEVIEVKP---------LTP----------------------TIVMKHLYDRGCLSVLWECGGTLAARAIVEGAVQKVFAFIAPK--IIGGAD 321          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A0H3K936_SYNP6 (Riboflavin biosynthesis protein RibD n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=A0A0H3K936_SYNP6)

HSP 1 Score: 75.5 bits (184), Expect = 1.950e-11
Identity = 80/273 (29.30%), Postives = 107/273 (39.19%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVR---KLAACLSALPPMTLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRAL 268
            MVDPDPR  G G+ RL  AGI+V+VGVE AAC+ +N  FV RV+ +  +G+L     LDG    S    A   +    R+   L          + DA++V G   VR       C        LRVV                 +   L   LE+ LW      T+VF    A + R  +        LE +GV +V   P          +P                      + VS EL+ RG+    WE G  +AA A   G IQ+ L
Sbjct:  102 MVDPDPRVTGGGIARLQQAGIEVTVGVEQAACEQMNEAFVWRVTQRRPFGILKYAMTLDGRIAASTGHSAWVSSPESRRQVHSLRS--------QVDAVIVGG-NTVRLDNPRLTCHDISDRHPLRVV-----------------MSRRLDLPLEANLWQTDIAPTLVFTEETADRDRWRK--------LEDQGVEVVVRSP---------LTP----------------------SEVSAELFNRGLSTLLWECGGTLAAAALREGLIQKLL 309          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A8J7ER97_9CYAN (Riboflavin biosynthesis protein RibD n=1 Tax=Oculatella sp. LEGE 06141 TaxID=1828648 RepID=A0A8J7ER97_9CYAN)

HSP 1 Score: 75.1 bits (183), Expect = 2.550e-11
Identity = 86/287 (29.97%), Postives = 117/287 (40.77%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPPMTLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRALVRRRPRRGEIGGADTSA 285
            M+DP+PR AGSG+ RL  AGIDV VGVE AACQ LN  FV R+ ++  +G+L     LDG    +    A   ++A      +L            DA+VV G   VR+    L++          VG  P           +   L   L + LW      T+VF            +    + AL  +GV +++          P  SPA                      AV   LY+RGML   WE G  +AA A   G +Q+ L    P+   IGGA  S+
Sbjct:  104 MIDPNPRVAGSGVERLRQAGIDVVVGVEEAACQELNEAFVFRILYQRPFGILKYAMTLDGKIATTTGHSAWVTSAAARSLVHQLRA--------GCDAVVVGG-NTVRRDNPLLTSHQ--------VGHDPLRVV-------MSRTLDIPLTAQLWHAQTAPTLVFT--------ETGTQPDTQLALVQQGVEVIEL---------PVLSPA----------------------AVMAHLYQRGMLSVLWECGGTLAAKAIADGAVQKILAFVAPKL--IGGAIASS 325          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A845WY50_9CYAN (Riboflavin biosynthesis protein RibD n=1 Tax=Spirulina sp. SIO3F2 TaxID=2607816 RepID=A0A845WY50_9CYAN)

HSP 1 Score: 74.3 bits (181), Expect = 4.480e-11
Identity = 77/275 (28.00%), Postives = 111/275 (40.36%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPPMTLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFV-----PAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRAL 268
            M+DPDPR +G+G++RL DAGI+V VGVE AAC+ LN  F+HRV+H+   G+L     LDG    +    A     A      +L          E DA++V G   VR+             R+   G S            LD       ++ LW  S   T+V+      PAV             +  L+ +GV +++          P  +P                       AV  +LY+RG+    WE G  +AA A   G IQ+ +
Sbjct:   94 MIDPDPRVSGTGIQRLRDAGIEVRVGVEQAACEQLNEAFIHRVTHQRPLGILKYAMTLDGKIATTTGHSAWVSGPASRHLVHQLRA--------ESDAVLVGG-NTVRR----------DNPRLTSHGVSDHNPLRVVMTRSLDLPT----QANLWDVSIAPTVVYTLLNINPAV-------------QTTLQQQGVEVINL---------PELTP----------------------QAVMHDLYQRGLSQIFWECGGTLAAAALKAGVIQKVM 301          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A2V3IHN7_9FLOR (Riboflavin biosynthesis protein RibD n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN7_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 8.000e-11
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLHCPL---------DGSSTGSESPEAVECTSAVLREADELTV 84
            M+DPDPRTAG+G++ L  AG+ V VGV+ + C  LN  FVHRV HK  +G+L   +         DG+S     P + +C   + R  D + V
Sbjct:  145 MIDPDPRTAGNGVKTLRQAGVSVHVGVQSSLCTQLNEGFVHRVRHKRPFGILKYAMTLDGKIAATDGTSKWVTGPASRQCVQHIRRSVDAIIV 237          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: UPI001F022A81 (bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F022A81)

HSP 1 Score: 73.2 bits (178), Expect = 1.090e-10
Identity = 75/273 (27.47%), Postives = 110/273 (40.29%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPP--MTLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFV-PAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRAL 268
            M+DP+P+ AG+G+ RL +AGI+V+VGVE AACQ LN  FVHR+ ++  +G+L     LDG         A   +     E  +L            DAI+V G   +R+    L++  P    LRV+                 +   L    ++ +W      T+VF  P V  + +           L  +GV +V+  P          +PA                       V   LY RG L   WE G  +AA A   G +Q+ L
Sbjct:  101 MIDPNPQVAGTGIARLREAGIEVTVGVEAAACQELNEAFVHRILYRRPFGILKYAMTLDGKIAAVTRHSAWVTSEPARTEVHKLRA--------ACDAIIVGG-NTLRQDDPLLTSRQPNRTPLRVI-----------------MSRSLDLPQQANVWNTVVASTLVFTRPGVRPEFQQQ---------LRQQGVEVVEREP---------LTPA----------------------TVMANLYDRGFLTVLWECGGTLAARAIADGAVQKVL 307          
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Match: A0A6P0YW10_9CYAN (Riboflavin biosynthesis protein RibD n=1 Tax=Merismopedia sp. SIO2A8 TaxID=2607779 RepID=A0A6P0YW10_9CYAN)

HSP 1 Score: 72.8 bits (177), Expect = 1.530e-10
Identity = 79/273 (28.94%), Postives = 107/273 (39.19%), Query Frame = 0
Query:    1 MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYGVLH--CPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVEGPQGVRKLAACLSALPPM---TLRVVIVGGSPSXXXXXXXXXGLDAELGGVLESPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPAVAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEVGPVMAAVAAGRGHIQRAL 268
            MVDPDPR AGSG+ RL +AGI+V+VGV+ A CQ LN  FVHR++H   +G+L     LDG    +    A   + A   +   L            DA++V G   VRK    LS         LRVV                 +   L    ++ LW  +   T +F      Q  H       + +L+A+GV +V           P  +P                        V   LY RG     WE G  +AA A   G +Q+ L
Sbjct:  107 MVDPDPRVAGSGIARLREAGIEVTVGVKEADCQRLNEAFVHRITHHRPFGILKYAMTLDGKIATTSGHSAWVTSPAARHQVHHLRA--------ACDAVIVGG-NTVRKDNPLLSTHGVSHHNPLRVV-----------------MSRTLNLSEQAQLWDTTAIPTTIFTE----QEGHPEQ----QRSLQAQGVEVVKI---------PNLTP----------------------DKVMANLYDRGCSSVLWECGGTLAAQAIADGAVQKVL 314          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFC3_ECTSI2.560e-8650.25Diaminohydroxyphosphoribosylaminopyrimidine deamin... [more]
A0A836CAQ1_9STRA6.630e-3045.54CMP/dCMP-type deaminase domain-containing protein ... [more]
UPI001745ECF92.180e-1230.69bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
UPI001A0E5AFA3.140e-1229.07Bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A0H3K936_SYNP61.950e-1129.30Riboflavin biosynthesis protein RibD n=4 Tax=Synec... [more]
A0A8J7ER97_9CYAN2.550e-1129.97Riboflavin biosynthesis protein RibD n=1 Tax=Ocula... [more]
A0A845WY50_9CYAN4.480e-1128.00Riboflavin biosynthesis protein RibD n=1 Tax=Spiru... [more]
A0A2V3IHN7_9FLOR8.000e-1139.78Riboflavin biosynthesis protein RibD n=1 Tax=Graci... [more]
UPI001F022A811.090e-1027.47bifunctional diaminohydroxyphosphoribosylaminopyri... [more]
A0A6P0YW10_9CYAN1.530e-1028.94Riboflavin biosynthesis protein RibD n=1 Tax=Meris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:389001..392265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12361.1mRNA_P-fluviatile_contig6.12361.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 386107..392265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12361.1 ID=prot_P-fluviatile_contig6.12361.1|Name=mRNA_P-fluviatile_contig6.12361.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=371bp
MVDPDPRTAGSGLRRLADAGIDVSVGVEGAACQALNSPFVHRVSHKSCYG
VLHCPLDGSSTGSESPEAVECTSAVLREADELTVPPDVLSYVEYDAIVVE
GPQGVRKLAACLSALPPMTLRVVIVGGSPSGSGGGGGGGGLDAELGGVLE
SPLWTDSPERTIVFVPAVAVQVRHNRSGGLARAALEARGVSIVDYYPPPA
VAAPPRFSPAGHEAGASISEDAAAAMAGAAATAVSRELYRRGMLCTAWEV
GPVMAAVAAGRGHIQRALVRRRPRRGEIGGADTSAEGGGGVGSSGGGRDQ
AEVVGAAGGGVPSLEEEEKEALRVIRRLSGREGVRVRRSGRGIPSEAGAR
SFIEVLLPAPEVDTPAAFAS*
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