prot_P-fluviatile_contig6.12445.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12445.1
Unique Nameprot_P-fluviatile_contig6.12445.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length254
Homology
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BLAST of mRNA_P-fluviatile_contig6.12445.1 vs. uniprot
Match: A0A6H5KG66_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG66_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.500e-20
Identity = 55/86 (63.95%), Postives = 61/86 (70.93%), Query Frame = 0 
Query:  165 GVVIRVLIAGAHASFLHMRVFPSTTARQVCRKIGEKMRQSPSEQREHVLIAIYPRPAAGDSGXXXXXN-----HIAKAMDEGDAAG 245
            GVVIR+LI+GAHASFLHMRVFPSTTA QVCRKIGEK+RQ P+EQ E+VLIAIY RP+   S      N     H A   D G A G
Sbjct:  153 GVVIRILISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPSRNVSDTGGGSNGPGHRHSAGVADRGAAVG 238
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BLAST of mRNA_P-fluviatile_contig6.12445.1 vs. uniprot
Match: D8LCW3_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW3_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.020e-19
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:  165 GVVIRVLIAGAHASFLHMRVFPSTTARQVCRKIGEKMRQSPSEQREHVLIAIYPRPA 221
            GVVIRVLI+GAHASFLHMRVFPSTTA QVCRKIGEK+RQ P+EQ E+VLIAIY RPA
Sbjct:  181 GVVIRVLISGAHASFLHMRVFPSTTAGQVCRKIGEKLRQLPAEQNEYVLIAIYARPA 237
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG66_9PHAE5.500e-2063.95PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCW3_ECTSI1.020e-1985.96PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1158768..1161997 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12445.1mRNA_P-fluviatile_contig6.12445.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 1158768..1161997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12445.1 ID=prot_P-fluviatile_contig6.12445.1|Name=mRNA_P-fluviatile_contig6.12445.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=254bp
CESRSPPRQHVDAMHELDKEDSTDFKTTAASTSRAGGSSACLTNSTEAES
FDQRKQLGRPPSLEGRGQQPRQQQQEEKQQQQQRQQDQLLSRHCGGSNGP
SNFGGSGSNHGPQSGFSKSSVGEVAAARSLQRANQGEAGGVEADGARSPS
AEAAAAAFAPAAATGVVIRVLIAGAHASFLHMRVFPSTTARQVCRKIGEK
MRQSPSEQREHVLIAIYPRPAAGDSGGGGGGNHIAKAMDEGDAAGGGDGG
SMSG
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