prot_P-fluviatile_contig6.12354.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig6.12354.1
Unique Nameprot_P-fluviatile_contig6.12354.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length138
Homology
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A1S3V0Q1_VIGRR (RING-H2 finger protein ATL70-like n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3V0Q1_VIGRR)

HSP 1 Score: 68.2 bits (165), Expect = 4.250e-11
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   15 STDVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFIS 68
            S+  +C ICL  Y D  +LRVL  C  FFH+ CVD WL+   TCPVCRTPI +S
Sbjct:  188 SSSSSCSICLMDYKDRDSLRVLPACGHFFHVKCVDPWLRINMTCPVCRTPITLS 241          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A2P5XC29_GOSBA (RING-type domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A2P5XC29_GOSBA)

HSP 1 Score: 65.9 bits (159), Expect = 5.820e-11
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   14 RSTDVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFIS 68
            +S + AC ICL  Y +   LR++  C   FHLSC+D WL++  TCPVCRTP+  S
Sbjct:   80 KSMEDACSICLGEYKEKEVLRIMPKCAHNFHLSCIDVWLRKHSTCPVCRTPLLDS 134          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A6N2AMA8_SOLCI (RING-type domain-containing protein n=5 Tax=Solanum TaxID=4107 RepID=A0A6N2AMA8_SOLCI)

HSP 1 Score: 67.8 bits (164), Expect = 6.740e-11
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    4 VHGKGNGGGGRSTDVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFISP 69
            ++ K NGG G   DV C ICL  Y D   LR++  C+ +FH+ C+D WLK   +CPVCR     +P
Sbjct:  173 IYSKRNGGSGNGNDVVCPICLCEYKDGEMLRMMPDCKHYFHVMCLDAWLKLNASCPVCRNSPLPTP 238          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: UPI000A2B1FDF (RING-H2 finger protein ATL5 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI000A2B1FDF)

HSP 1 Score: 65.5 bits (158), Expect = 8.190e-11
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFISPAA 71
            D  CVICL+ Y +   LR++  C   FHLSC+D WL+++ TCPVCR P+  S  A
Sbjct:   40 DTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEA 94          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A0D2QW73_GOSRA (RING-type domain-containing protein n=16 Tax=Gossypium TaxID=3633 RepID=A0A0D2QW73_GOSRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.360e-11
Identity = 26/52 (50.00%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFIS 68
            D  C ICL  Y++   LR++  C   FHLSC+D WL++  TCPVCRTP+  S
Sbjct:   84 DAQCSICLGEYVEKEVLRIMPKCAHNFHLSCIDVWLRKHSTCPVCRTPLLDS 135          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: V7BEG0_PHAVU (RING-type domain-containing protein n=2 Tax=Phaseoleae TaxID=163735 RepID=V7BEG0_PHAVU)

HSP 1 Score: 65.1 bits (157), Expect = 1.100e-10
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   15 STDVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFIS 68
            S+  +C ICL  Y +  +LRVL  C  FFH+ CVD WL+   TCPVCRTPI +S
Sbjct:   83 SSSSSCSICLMDYKECDSLRVLPACGHFFHVKCVDPWLRINLTCPVCRTPITLS 136          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: B7FIK5_MEDTR (RING-type domain-containing protein (Fragment) n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FIK5_MEDTR)

HSP 1 Score: 65.9 bits (159), Expect = 1.330e-10
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPI 65
            D  CVICL+ Y +   LR++  C   FHLSC+D WLK++ TCPVCR P+
Sbjct:   87 DTQCVICLADYKEREILRIMPKCGHTFHLSCIDIWLKKQSTCPVCRLPL 135          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A2K3LQX6_TRIPR (RING-H2 finger protein ATL54-like n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LQX6_TRIPR)

HSP 1 Score: 64.7 bits (156), Expect = 1.390e-10
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPI 65
            D  CVICL+ Y +   LR++  C   FHLSC+D WL+++ TCPVCR P+
Sbjct:   34 DTQCVICLADYKEREILRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPL 82          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A445ADP6_ARAHY (RING-type domain-containing protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445ADP6_ARAHY)

HSP 1 Score: 64.7 bits (156), Expect = 1.420e-10
Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFISPAA 71
            D  CVICL+ + +   LR++  C   FHLSC+D WL+++ TCPVCR P+  S  A
Sbjct:   70 DTQCVICLADFREREVLRIMPKCNHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEA 124          
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Match: A0A445DDJ8_ARAHY (RING-type domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445DDJ8_ARAHY)

HSP 1 Score: 65.5 bits (158), Expect = 1.990e-10
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
Query:   17 DVACVICLSGYMDHCALRVLVPCELFFHLSCVDEWLKRRGTCPVCRTPIFISPAA 71
            D  CVICL+ Y +   LR++  C   FHLSC+D WL+++ TCPVCR P+  S  A
Sbjct:   87 DTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1S3V0Q1_VIGRR4.250e-1155.56RING-H2 finger protein ATL70-like n=1 Tax=Vigna ra... [more]
A0A2P5XC29_GOSBA5.820e-1149.09RING-type domain-containing protein n=2 Tax=Gossyp... [more]
A0A6N2AMA8_SOLCI6.740e-1143.94RING-type domain-containing protein n=5 Tax=Solanu... [more]
UPI000A2B1FDF8.190e-1149.09RING-H2 finger protein ATL5 n=1 Tax=Arachis ipaens... [more]
A0A0D2QW73_GOSRA8.360e-1150.00RING-type domain-containing protein n=16 Tax=Gossy... [more]
V7BEG0_PHAVU1.100e-1053.70RING-type domain-containing protein n=2 Tax=Phaseo... [more]
B7FIK5_MEDTR1.330e-1053.06RING-type domain-containing protein (Fragment) n=1... [more]
A0A2K3LQX6_TRIPR1.390e-1051.02RING-H2 finger protein ATL54-like n=1 Tax=Trifoliu... [more]
A0A445ADP6_ARAHY1.420e-1047.27RING-type domain-containing protein n=1 Tax=Arachi... [more]
A0A445DDJ8_ARAHY1.990e-1049.09RING-type domain-containing protein n=3 Tax=Arachi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 20..62
e-value: 1.5E-10
score: 41.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 20..62
score: 10.925
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 7..68
e-value: 9.1E-16
score: 58.8
NoneNo IPR availablePANTHERPTHR45676FAMILY NOT NAMEDcoord: 9..73
NoneNo IPR availablePANTHERPTHR45676:SF33RING-H2 FINGER PROTEIN ATL54coord: 9..73
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 17..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:341538..342442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12354.1mRNA_P-fluviatile_contig6.12354.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig6 341536..342442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig6.12354.1 ID=prot_P-fluviatile_contig6.12354.1|Name=mRNA_P-fluviatile_contig6.12354.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=138bp
GGQVHGKGNGGGGRSTDVACVICLSGYMDHCALRVLVPCELFFHLSCVDE
WLKRRGTCPVCRTPIFISPAAAAGGGGYAAQTEDDSAADVPAGHPDAPTG
PAAPVSDRTGVILRGIRPWLALEELGAAAGSRARSAAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD