mRNA_P-fluviatile_contig11.1203.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig11.1203.1
Unique NamemRNA_P-fluviatile_contig11.1203.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S0Q5J9_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5J9_9EUKA)

HSP 1 Score: 237 bits (605), Expect = 3.470e-67
Identity = 147/298 (49.33%), Postives = 177/298 (59.40%), Query Frame = 1
Query:  667 VALAPKGCTRCRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICSE 1560
            + LA      C  C  GG RARNHCP RTVLGIL K+GTYA+Y+TLP RNLHVVPD+V+   A FAEPLAAA RIVEQGLV      AV+GDGKLGLL++EVL R  AAA                              L GRH  KM +     + +    E S+ NA P              A  FD+VVDATGSP+GL  + E+CRPMGTVVLKSTCA    FN AP VI+E R++GSRCGPF+ AL+LLAE    +D+   V+  F L EA  A+  A KKG +K+Q++ SE
Sbjct:  104 INLACADLATCSTCACGGARARNHCPTRTVLGILRKDGTYAQYLTLPARNLHVVPDSVTTENAAFAEPLAAAFRIVEQGLVRATDRVAVIGDGKLGLLISEVLGRHAAAAGGP------------------------RPVLFGRHDSKMRLLSSGANVDT---ELSV-NALPEN------------AAAFDLVVDATGSPAGLDLSREICRPMGTVVLKSTCAASKDFNTAPFVIDELRVMGSRCGPFKPALQLLAEG---LDLTPLVTKRFPLSEATDAIREAGKKGCMKIQLVISE 358          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S1AD40_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AD40_NOCSC)

HSP 1 Score: 237 bits (604), Expect = 4.540e-67
Identity = 141/292 (48.29%), Postives = 175/292 (59.93%), Query Frame = 1
Query:  688 CTRCRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICSEA 1563
            C  C +C  GG  ARNHC  R+VLGIL  +GTYAE++TLP  NLHVVPD +S+ AAVF EPLAAA R+VEQGLV P     V GDGKLGLLVAEVLAR+G +                               L+GRHA KM +   L        E S    +  LV        A LAG FDVVV+ATG+P GL +A+ L  PMGTVVLKSTCA+ A  + +P+V+ E ++VGSRCGPF  A+ LL    G +D+++YVS VF LE A  A+E A  +G LKVQ+  + +
Sbjct:   95 CNSCGICSRGGSLARNHCLRRSVLGILNHDGTYAEFLTLPVSNLHVVPDGISNEAAVFVEPLAAAFRVVEQGLVQPEHRVCVQGDGKLGLLVAEVLARQGLSP---------------------------KPVLLGRHADKMALLGDLVQAR----EASSPEESDSLV--------AELAGSFDVVVEATGTPLGLTSAASLVLPMGTVVLKSTCASPATIDTSPLVVRELKVVGSRCGPFPEAVTLL--NSGDLDVQKYVSAVFPLENADKALEMAGTRGCLKVQLAVASS 345          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S1Y2C0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y2C0_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.790e-66
Identity = 148/310 (47.74%), Postives = 186/310 (60.00%), Query Frame = 1
Query:  685 GCTRCRVCEGGGDR-----ARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGAD--AAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMD-------ICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEG-----RIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICS 1557
            GC  CRVC+G  D      +RNHCP RTVLGIL +NGT AEY+TLP +NLH+VPD++SD  AVF+EPLAAACRIVEQGLV   +    A+LGDGKLGL++AEV+ R   +   T+ A                        L G+H  K+        I   + D +    +DS  N       VAA  A A     +DVVVDATG+P+ L  A+ LCRPMGTVVLKSTCA G  FN AP VI+E R++GSRCGP + AL LLA  E       + +++YV+  F L +A  A+ECA K+  +KVQIICS
Sbjct:  126 GCFSCRVCQGSRDSCCSQMSRNHCPNRTVLGILNRNGTMAEYLTLPVQNLHLVPDHISDEDAVFSEPLAAACRIVEQGLVSIESSDKVAILGDGKLGLMIAEVMGREYLSVKGTAEAPE-------------------PPILFGKHDHKLKLVENSGVITKMVSDCQ----DDSAFNG------VAAAHAAA-----YDVVVDATGNPAALLLAAGLCRPMGTVVLKSTCAAGEQFNAAPFVIDELRVIGSRCGPIDKALELLALQEDDAGIPSLRVQKYVTKTFPLSQAKEAVECAAKRETMKVQIICS 401          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S2SK93_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK93_9STRA)

HSP 1 Score: 234 bits (598), Expect = 3.530e-66
Identity = 139/285 (48.77%), Postives = 171/285 (60.00%), Query Frame = 1
Query:  697 CRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGAD-AAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQI 1548
            C  C  GG RARNHCP RTVLGIL K+GTYA+Y+TLP  NLHVVP++VS A A F EPLAAACRIVEQGL+ P  D  AVLGDGKLGLL+AEV+ R      A+ST   +                   T L GRH +KM +  +         ED++                    G++DVV+DATGSP GL  A +LCRP+GT+VLKSTCA G  FN AP VI+E R++GSRCGPF  AL LL   E  +D+ + ++  F  E+   A+  A  KG LKVQ+
Sbjct:  106 CHTCGCGGVRARNHCPNRTVLGILNKDGTYAQYLTLPVTNLHVVPESVSTANAAFVEPLAAACRIVEQGLIDPTTDRVAVLGDGKLGLLIAEVVGRH-VHGGASSTEEPSSP----------------CTVLFGRHPEKMALVSQEAHVAVHSSEDALPTH----------------GGQYDVVIDATGSPQGLDLAQKLCRPLGTLVLKSTCAAGTDFNTAPFVIDELRVIGSRCGPFPEALALL---ESGLDLTKLITASFPFEQVDEALRKAASKGCLKVQL 354          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A1E7FAK7_9STRA (GroES-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAK7_9STRA)

HSP 1 Score: 233 bits (593), Expect = 2.210e-65
Identity = 151/325 (46.46%), Postives = 184/325 (56.62%), Query Frame = 1
Query:  685 GCTRCRVCEG-GGDR---------ARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLV---PPGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAET-EGRID------------------IERYVSGVFTLEEAAAAMECANKKGALKVQIICSEA 1563
            GC+ C VC     DR         +RNHCP R+VLGIL +NGT AEY+TLP  NLH VP +VSD  AVFAEPLAAACRIVEQGLV   PP    A+LGDGKLGL++AEVL R  +     S                          L G+H  K+D+       +     D         V        A  AG+FDVVVDATGSP+GL+ AS LCRPMGT+VLKSTCA G  FN AP VI+E R+VGSRCGP + AL LLA T + +ID                  + +Y++  F L EA AA++CA +K  +KVQIIC+E+
Sbjct:   70 GCSSCNVCLNFPHDRNVKGNCPMMSRNHCPTRSVLGILNRNGTIAEYLTLPVSNLHEVPSHVSDEVAVFAEPLAAACRIVEQGLVRVIPPD-KVAILGDGKLGLMIAEVLGREHSTRLGCSK--------------------YPKPILFGKHKHKLDLVRESAGVDCRSVSDCKDEKAFNGV-------SAEYAGQFDVVVDATGSPAGLSLASGLCRPMGTLVLKSTCAAGEKFNAAPFVIDELRVVGSRCGPIDKALDLLAITNDNKIDGSGNDSSNNKKANIRPLNVVKYITRTFPLSEAVAAIKCAAEKSTMKVQIICNES 366          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A0M0JNU1_9EUKA (L-threonine 3-dehydrogenase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNU1_9EUKA)

HSP 1 Score: 229 bits (584), Expect = 2.200e-64
Identity = 140/284 (49.30%), Postives = 167/284 (58.80%), Query Frame = 1
Query:  697 CRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQI 1548
            C  C  G DRARNHCP RTVLGIL K+GTY E ITLP +NLHVVPD+VS   A FAEPLAAA RIVEQ LV P    AV+GDGKLG+L+AEVL R   AA                               +GRH +KM +                 +A   +  VA+     + A  FDVVVDATGSP+GL  A  LCRP+GT+VLKSTCA GA FN AP V++E +I+GSRCGPF  AL LLA     +D+   ++  F L EA+AA+  A  KG +KVQI
Sbjct:   93 CFTCACGWDRARNHCPVRTVLGILNKDGTYQERITLPAKNLHVVPDHVSSENAAFAEPLAAAFRIVEQKLVAPTDKVAVVGDGKLGVLIAEVLGRAQVAAGGP------------------------RVVFVGRHPEKMALV----------------SAAAAVEPVASDGVLPSGASSFDVVVDATGSPAGLDLARALCRPLGTLVLKSTCAAGANFNTAPFVVDELKIIGSRCGPFPPALELLASG---LDLTPLITATFPLTEASAAVAKAATKGTMKVQI 333          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A1Z5KM79_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM79_FISSO)

HSP 1 Score: 227 bits (578), Expect = 3.190e-63
Identity = 142/312 (45.51%), Postives = 180/312 (57.69%), Query Frame = 1
Query:  685 GCTRCRVCEGGGDR-----ARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVP---PGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQAN-----LAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAG--FNPAPVVINEQRIVGSRCGPFEAALRLLAETEG-----RIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICSE 1560
            GC  C VC+   D      +RNHCP R+VLGILG+NG+ AEY+TLP RNLH VPD++ D  AVF+EPLAAACRIVEQGLV    P    A+LGDGKLGL++AEVL R         T R              V  A+    L G+H  K+ +              S      +L++     +  N      AGKFDVVVDATGSP  LA ++ LCRPMGT+VLKSTCA+     FN AP VI+E ++VGSRCGP + AL LLA  +       +++ +Y++  F L  A  A+ CA  K  +KVQIIC+E
Sbjct:   91 GCAACGVCDKQYDHRCSQMSRNHCPNRSVLGILGRNGSMAEYLTLPVRNLHPVPDDMPDEVAVFSEPLAAACRIVEQGLVSYNDPPDKVAILGDGKLGLMIAEVLGRE-------HTER--------------VGNALDAPVLFGKHEHKLQLV-------------SDAGVITKLIKECQDSSAFNGVSPAYAGKFDVVVDATGSPDALALSAALCRPMGTLVLKSTCASTPEKPFNSAPFVIDELKVVGSRCGPIDRALALLAIPDSDPNRRSLNVAKYITKSFPLSRADEAIRCAAAKSTMKVQIICNE 368          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S1D6F2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6F2_CYCTE)

HSP 1 Score: 224 bits (572), Expect = 3.700e-62
Identity = 146/318 (45.91%), Postives = 182/318 (57.23%), Query Frame = 1
Query:  685 GCTRCRVC-------EGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGAD----AAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMD-------ICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRID--------IERYVSGVFTLEEAAAAMECANKKGALKVQIICSE 1560
            GC  C VC       E     +RNHCP RTVLGIL +NGT AEY+TLP  NLHVVPD+V D  AVFAEPLAAACRI EQ LV   A      A+LGDGKLGL++AEVL R      AT+   A+                     L G+H  K+D       +C  + + +    ++   N       VAAG A      ++DVVVDATGSP+GL+ A+ LCRPMGT+VLKSTCA G  FN AP VI+E ++VGSRCGP E AL LLA      D        + +Y++  F L +A  A+ CA +K  +KVQI+C+E
Sbjct:   98 GCADCSVCFNAERLDERCCKMSRNHCPNRTVLGILKRNGTMAEYLTLPVSNLHVVPDDVPDEEAVFAEPLAAACRIPEQNLVYYNAQRPDKVAILGDGKLGLMIAEVLGREHTKHFATAANDASPPPP-------------PRPVLFGKHQHKLDLVKDSGVVCKHVSECK----DEKAFNG------VAAGHAA-----QYDVVVDATGSPAGLSLAAGLCRPMGTLVLKSTCAAGEQFNAAPFVIDELKVVGSRCGPIEKALELLAVRNPEADHVGTEPLRVTKYITQTFPLNKADEAILCAKEKSTMKVQIVCNE 387          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S2KFL9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFL9_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.170e-61
Identity = 140/318 (44.03%), Postives = 184/318 (57.86%), Query Frame = 1
Query:  688 CTRCRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGAD-AAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDI-------CCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLA------ETEGR--------------IDIERYVSGVFTLEEAAAAMECANKKGALKVQIICS 1557
            C  C +C  G DR+RNHCP RTVLGIL K+GT AEY+TLP  NLH VP+NVSD  AVFAEPLAAACRIVEQ ++    D  A+LGDGKLGL++AEVL R           ++ G +  S          +    L+G+HA KM +       C  + D +     D  GN  P   +            +FDVV+DATG+ +GLA ++ L RPMGT+VLKSTCA+G  FN AP VI+E ++VGSRCGPF  AL+LL+      ET G               ++  +Y++  + L +A  A+  A ++  +KVQIICS
Sbjct:  130 CQSCDICSLGTDRSRNHCPNRTVLGILNKDGTMAEYLTLPINNLHEVPENVSDGDAVFAEPLAAACRIVEQNVINFDEDRVAILGDGKLGLMIAEVLGRE-FLKVQDDAEKSEGIEGKS----------IPKPLLLGKHANKMKLVEESGAQCRNISDCK-----DEEGNIRPEYTQ------------QFDVVIDATGNSAGLAISTSLTRPMGTIVLKSTCASGDLFNAAPFVIDELKVVGSRCGPFPKALQLLSISDDSDETNGDGSAGCCKASSCMKGLNATKYITRYYPLSQAEEALAFAAERSTMKVQIICS 419          
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Match: A0A7S4EC03_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EC03_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.020e-60
Identity = 136/291 (46.74%), Postives = 164/291 (56.36%), Query Frame = 1
Query:  688 CTRCRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCRNLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGADAAVLGDGKLGLLVAEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKMDICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGSPSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFEAALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICSE 1560
            C  C +CE GG RARNHCP+RTVLGIL KNGTY E +TLP RNLHVVPD V    A FAEPLAAA R+VEQ LVP     A++GDGKLGLL+ EVL R    A  T + R                       L GRH  KM    +L  +E          A P+                +DVVVDATGSP+GL  + +LCR  GT+VLKSTCA G  FN AP V++E R+ GSRCGPF  AL LL      +D+   +   F L +A  A++ A ++G LKVQI  S+
Sbjct:  108 CNTCMLCERGGPRARNHCPKRTVLGILNKNGTYQERLTLPARNLHVVPDCVKTENAAFAEPLAAAFRVVEQNLVPAKTKIAIVGDGKLGLLIGEVLGRH---AQRTGSPR---------------------PVLYGRHVSKM----KLLSSESQCDTALSDTALPKNAYA------------YDVVVDATGSPAGLDLSRQLCRTEGTLVLKSTCAAGTDFNTAPFVVDELRVQGSRCGPFGPALELLKT----LDLTPLIDSTFPLAKAPEAVKRAGERGCLKVQIRVSD 354          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1203.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0Q5J9_9EUKA3.470e-6749.33Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S1AD40_NOCSC4.540e-6748.29Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S1Y2C0_9STRA1.790e-6647.74Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2SK93_9STRA3.530e-6648.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1E7FAK7_9STRA2.210e-6546.46GroES-like protein n=1 Tax=Fragilariopsis cylindru... [more]
A0A0M0JNU1_9EUKA2.200e-6449.30L-threonine 3-dehydrogenase n=1 Tax=Chrysochromuli... [more]
A0A1Z5KM79_FISSO3.190e-6345.51Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1D6F2_CYCTE3.700e-6245.91Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2KFL9_9STRA3.170e-6144.03Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4EC03_9STRA1.020e-6046.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig11contigP-fluviatile_contig11:2487835..2491558 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue3.2e-50
Seed eggNOG ortholog35128.Thaps261172
EggNOG free text desc.L-arabinose catabolic process
EggNOG OGsCOG1063@1,KOG0024@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons5
Model size2589
Cds size1218
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815466.4618378-UTR-P-fluviatile_contig11:2487834..24888421622815466.4618378-UTR-P-fluviatile_contig11:2487834..2488842Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2487835..2488842 -
1693561925.3940718-UTR-P-fluviatile_contig11:2487834..24888421693561925.3940718-UTR-P-fluviatile_contig11:2487834..2488842Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2487835..2488842 -
1622815466.5411391-UTR-P-fluviatile_contig11:2491195..24915581622815466.5411391-UTR-P-fluviatile_contig11:2491195..2491558Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2491196..2491558 -
1693561925.4736195-UTR-P-fluviatile_contig11:2491195..24915581693561925.4736195-UTR-P-fluviatile_contig11:2491195..2491558Porterinema fluviatile SAG_2381UTRP-fluviatile_contig11 2491196..2491558 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815466.4744196-CDS-P-fluviatile_contig11:2488842..24889491622815466.4744196-CDS-P-fluviatile_contig11:2488842..2488949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2488843..2488949 -
1693561925.4159563-CDS-P-fluviatile_contig11:2488842..24889491693561925.4159563-CDS-P-fluviatile_contig11:2488842..2488949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2488843..2488949 -
1622815466.4886796-CDS-P-fluviatile_contig11:2489248..24894151622815466.4886796-CDS-P-fluviatile_contig11:2489248..2489415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2489249..2489415 -
1693561925.4277575-CDS-P-fluviatile_contig11:2489248..24894151693561925.4277575-CDS-P-fluviatile_contig11:2489248..2489415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2489249..2489415 -
1622815466.502557-CDS-P-fluviatile_contig11:2489866..24901731622815466.502557-CDS-P-fluviatile_contig11:2489866..2490173Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2489867..2490173 -
1693561925.437422-CDS-P-fluviatile_contig11:2489866..24901731693561925.437422-CDS-P-fluviatile_contig11:2489866..2490173Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2489867..2490173 -
1622815466.5144763-CDS-P-fluviatile_contig11:2490306..24904811622815466.5144763-CDS-P-fluviatile_contig11:2490306..2490481Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2490307..2490481 -
1693561925.4466414-CDS-P-fluviatile_contig11:2490306..24904811693561925.4466414-CDS-P-fluviatile_contig11:2490306..2490481Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2490307..2490481 -
1622815466.5291724-CDS-P-fluviatile_contig11:2490733..24911951622815466.5291724-CDS-P-fluviatile_contig11:2490733..2491195Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2490734..2491195 -
1693561925.4571269-CDS-P-fluviatile_contig11:2490733..24911951693561925.4571269-CDS-P-fluviatile_contig11:2490733..2491195Porterinema fluviatile SAG_2381CDSP-fluviatile_contig11 2490734..2491195 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig11.1203.1prot_P-fluviatile_contig11.1203.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig11 2488843..2491195 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig11.1203.1

>prot_P-fluviatile_contig11.1203.1 ID=prot_P-fluviatile_contig11.1203.1|Name=mRNA_P-fluviatile_contig11.1203.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=406bp
MIRPHHRKHSIRPRLNMTRTGEPLTVSPHPLLSTLKLALISKACSHWCLR
FALLGGRKTPRAVQIIARSNAMARSASMMTSNAIVTLLPETLVVLIMFST
RVALAPKGCTRCRVCEGGGDRARNHCPERTVLGILGKNGTYAEYITLPCR
NLHVVPDNVSDAAAVFAEPLAAACRIVEQGLVPPGADAAVLGDGKLGLLV
AEVLARRGAAAAATSTARAAGSDSGSAGTGGDVSGAVGTTTLIGRHAKKM
DICCRLPDTEGGGGEDSIGNATPRLVRVAAGEAQANLAGKFDVVVDATGS
PSGLAAASELCRPMGTVVLKSTCATGAGFNPAPVVINEQRIVGSRCGPFE
AALRLLAETEGRIDIERYVSGVFTLEEAAAAMECANKKGALKVQIICSEA
AGGGK*
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mRNA from alignment at P-fluviatile_contig11:2487835..2491558-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig11.1203.1 ID=mRNA_P-fluviatile_contig11.1203.1|Name=mRNA_P-fluviatile_contig11.1203.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3724bp|location=Sequence derived from alignment at P-fluviatile_contig11:2487835..2491558- (Porterinema fluviatile SAG_2381)
TCCATGTGCCGCTTAAACAGTTCTCTTCGTTCCCCTATTTCTTCCCTCAA TTCTTCGTCCCACCACTTAACCGCCTGACCACACCGGACCATCTTTTTTC CTATCACTTCCTCTGCGGTTGTGTTCACTATGTTTTCCCATCCTGCGATT ACTCTGTCACCTTTTATTTGAACGTCCTCTTCCTCTCCCGCTTTCCCCAT CAGTTCCCTTAATTGTTCTACGCTGTCTGCATTCCTTTGTTGGAATTCAG CACGTACTCTGTCGACGAAGGGAGTTGAAAAAGCAAATGTTCACCGTCGT TGCTAGGAGAGACATGTACAGCGCGTGCACGAGAAGGAGTGGGTGGGCAG AGGTGCGAGCTTGATGATTCGTCCGCATCATCGGAAGCATAGTATTCGTC CAAGACTAAATATGACCCGAACGGGTGAGCCATTGACCGTATCGCCCCAC CCTCTGCTCTCCACCTTGAAACTTGCACTGATAAGCAAAGCGTGCTCACA CTGGTGTCTTCGATTCGCGCTTTTGGGCGGAAGGAAGACCCCACGTGCCG TACAAATTATTGCCCGAAGCAACGCGATGGCACGAAGCGCGTCGATGATG ACCAGTAACGCTATCGTCACATTGCTGCCGGAAACGCTTGTTGTTCTGAT TATGTTTTCGACCCGTGTCGCGTTGGCACCCAAAGGGTGCACACGCTGTC GAGTTTGCGAGGGCGGCGGGGATCGCGCGAGGAATCACTGCCCGGAACGG ACCGTTCTCGGCATCCTGGGAAAGAATGGGACGTACGCAGAGTACATCAC GCTCCCTTGTCGGAACCTGCACGTGGTGAGCAGCGGCGGGAGGAAAGGGA GGGGCTCGGAGGAGACAGACGGGCAGTGCTCCACAAGCAGGGAGCATACC CGAACAGAAACCATGAATGCTTCCTTTGTTTTGCCGGCCACCGACGGTTC GGCAGCGAAAACGCAATGCGGGCGATGCTCACCATGATGCGTATTCCGGC ACGAAGACGTCACCTCCAGCGGCTTGTTGACAATTTCGAACGAGTTTGAT GGGAACCGCTGCACTTTCACGGGACAGGTTCCCGACAATGTCAGTGATGC CGCGGCTGTCTTCGCAGAGCCTCTCGCTGCTGCCTGCCGGATAGTGGAAC AGGGGCTGGTGCCCCCTGGCGCCGACGCCGCCGTGCTCGGGGACGGGAAA CTCGGACTCCTGGTGGCCGAGGTCCTGGCGAGGCGAGGGGCCGCCGCCGC CGGTGAGCAGCGCACACGTGAACGTTAGGTCGAAGGTTCCCATACGACAT GGCCCCCTGTGTGACCTGTTTTGCTTTGTAACCTCGTTCGCAAAACAAAC CGACGCCGCCTCCTGCAAAAAAAACGCCACGGCAGCAACATCAACGGCGA GAGCAGCAGGCTCCGATTCCGGGAGCGCGGGGACCGGAGGAGATGTATCG GGTGCGGTCGGAACTACAACTCTGATCGGCCGGCACGCGAAGAAGATGGA CATATGCTGCCGCCTGCCCGATACGGAGGGCGGCGGTGGAGAGGATTCCA TTGGAAACGCAACGCCACGCCTGGTTCGCGTTGCCGCCGGAGAGGCTCAA GCGAATCTGGCCGGGAAGTTCGATGTTGTCGTCGATGCCACGGGCAGCCC TTCCGGTTTGGCGGCCGCATCCGAGCTCTGTCGGCCGATGGGGTGAGAGG ACTGGATTAATTTTGGTGATTGTGGTGTTGATTCAAGGGGCATCGGCTCG AGGTAATTACTTTGCGGGGGCGGCGTGGCGAAACCGGGTGTATGTTATGC ACCGCAGTTTTTCGGAAACAGAATGGGGCAGTCCCACTGGTGTTTGGCTT GGCTGCGGCTGCGGCCGGCCCGGATCATCAGCAGGGAACGTCGCGTTACT TTGCAGTTGCAACATCCCAGGTGGCCACAGCTAACTCGCACTCGCGTTCT TCCGCTTGAATGCCTCTGTGCGTCCGTCTTGGAATACCAGTGAGAGAGCC GGCCCTGAAACCTCCATTTTAGACTGTTTTTGGACATCCGACGATGTTTT TTCGCGCCTGCTCGAGCTGCTACTCACCGCGTCGTCGGGTACTCTTCGAC CGTTCACCGACGCGGAACCACTTTTTGTTTTTCTACGTTCCAGGACGGTC GTACTGAAGTCTACCTGCGCAACGGGAGCCGGCTTCAACCCCGCCCCCGT TGTGATCAACGAGCAAAGAATAGTCGGCTCTAGGTGCGGCCCTTTCGAGG CCGCGCTGCGCCTGCTGGCGGAGACTGAGGGGCGCATCGACATCGAGCGC TACGTTTCAGGTAGGTTTGGTTCGCATTCGGCAGCAGCAGGTTGACCCTG GATGACGCTGCACGTGGTTACGCACAAAGTGGGTTTGGTTGTCGTCATGA TCATGATCATGATCATGATCATCATCATGTCAAAGGAAGCACCCTCGGAT CGATGTCTGTCGGGCGAAAAAGGATTCCAACTCGCGTGGACCCGGAGATG CCCCTTTTTGCACATGTGGACAAACGCCCTCCCTCGAAACCACCCGCCCG GACGACACATATTTCGACTGCGTGCGTTCTTATATTCTGGTTGGTGGGAT GGGGGCCAGGGGTATTCACCTTGGAAGAAGCCGCCGCGGCCATGGAGTGC GCTAACAAGAAGGGCGCCCTAAAGGTGCAGATAATATGCTCTGAGGCTGC TGGTGGCGGAAAGTGAGCAGGCAATTGTGCTGATATCAACAGAAGGCAGA AGAAGAGGCTTGTGTGCGGGGATGAGGTGCCGCCATGAATCATCGCGGAG CATTGCGCGGTTGGGGGTGCGGTGATCGCCTGGTGCTATGCGCGTCTCGA GCCCGCAACTTCGTGGCGAAAGTGGGCAGAAAGCCAGCTGACTGCTTTAC GTCGTCAACGGTTCAGGGACGAGCCGTTCGTGTTGATCGGCTGCCGTCGT TCTCGCCAAAATCATGCCCTGTTGTCCGTGTGGTACATCGTTGTGACTCA CTCCAGAGAAAAAAATAACGATGTTCAGATTTTTGGAGACCCGAAGATTC AGCCAGCTTGAGTCGGCGTGGGTGGAGCATGTCAGGGGTAGTGAGTGGTC ATCTTGTGTCATGTTGATGGTTGCCGTGCTTATGTGTCGGATTGCGCTGT GCGTGATGATACTAATGTGTGACAGCGGCGTAGTCGGATGTTCGAAGCTG CGGATGCGAAGAGGTTTGGTAGCACGCTGTAGGGCCGGCAATGGAGCGTT GGGACACTCCCTTCTGATAACCCACGTACGTGAGTACAAATTGTTGTGCG ACGGAATGATAAGAGAGTGATCGATGCTGACGGGGAGGGGGGCGGATCGG CGGGTGCGGGACACAAACGTCGCCGTGCAGCGATGGCCGGTTCATCGATG TACGATACTGTTTCGGCAGCCCGAGTTGAAATCTGCACTACTTGGGTTTG TCTCGTTCGCGAACAACCATGCTTGAGGAACGTGTGTCGCATCGTTAGCA GTTTCTTCGCAACCCTTGGCAGCCTTCAATGAGGCTGTGGTGTTTCTCCC CCGGCGGAAATATCAACACCGGGATAACGCGGAGACCTCTGTTGTATGTG GCGGATACTGTGTGAACCTGATTTGTCGCATGTGTACTCACAACCCCCCT AACCCTTGTGCCCCTTCCACAAAGCATCGATGTGGCTTAAACTCATCATG AGGTTACTTCGGTTCCCCCGTCGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig11:2487835..2491558-

>mRNA_P-fluviatile_contig11.1203.1 ID=mRNA_P-fluviatile_contig11.1203.1|Name=mRNA_P-fluviatile_contig11.1203.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2436bp|location=Sequence derived from alignment at P-fluviatile_contig11:2487835..2491558- (Porterinema fluviatile SAG_2381)
ATGATTCGTCCGCATCATCGGAAGCATAGTATTCGTCCAAGACTAAATAT
GACCCGAACGGGTGAGCCATTGACCGTATCGCCCCACCCTCTGCTCTCCA
CCTTGAAACTTGCACTGATAAGCAAAGCGTGCTCACACTGGTGTCTTCGA
TTCGCGCTTTTGGGCGGAAGGAAGACCCCACGTGCCGTACAAATTATTGC
CCGAAGCAACGCGATGGCACGAAGCGCGTCGATGATGACCAGTAACGCTA
TCGTCACATTGCTGCCGGAAACGCTTGTTGTTCTGATTATGTTTTCGACC
CGTGTCGCGTTGGCACCCAAAGGGTGCACACGCTGTCGAGTTTGCGAGGG
CGGCGGGGATCGCGCGAGGAATCACTGCCCGGAACGGACCGTTCTCGGCA
TCCTGGGAAAGAATGGGACGTACGCAGAGTACATCACGCTCCCTTGTCGG
AACCTGCACGTGATGATTCGTCCGCATCATCGGAAGCATAGTATTCGTCC
AAGACTAAATATGACCCGAACGGGTGAGCCATTGACCGTATCGCCCCACC
CTCTGCTCTCCACCTTGAAACTTGCACTGATAAGCAAAGCGTGCTCACAC
TGGTGTCTTCGATTCGCGCTTTTGGGCGGAAGGAAGACCCCACGTGCCGT
ACAAATTATTGCCCGAAGCAACGCGATGGCACGAAGCGCGTCGATGATGA
CCAGTAACGCTATCGTCACATTGCTGCCGGAAACGCTTGTTGTTCTGATT
ATGTTTTCGACCCGTGTCGCGTTGGCACCCAAAGGGTGCACACGCTGTCG
AGTTTGCGAGGGCGGCGGGGATCGCGCGAGGAATCACTGCCCGGAACGGA
CCGTTCTCGGCATCCTGGGAAAGAATGGGACGTACGCAGAGTACATCACG
CTCCCTTGTCGGAACCTGCACGTGGTTCCCGACAATGTCAGTGATGCCGC
GGCTGTCTTCGCAGAGCCTCTCGCTGCTGCCTGCCGGATAGTGGAACAGG
GGCTGGTGCCCCCTGGCGCCGACGCCGCCGTGCTCGGGGACGGGAAACTC
GGACTCCTGGTGGCCGAGGTCCTGGCGAGGCGAGGGGCCGCCGCCGCCGG
TTCCCGACAATGTCAGTGATGCCGCGGCTGTCTTCGCAGAGCCTCTCGCT
GCTGCCTGCCGGATAGTGGAACAGGGGCTGGTGCCCCCTGGCGCCGACGC
CGCCGTGCTCGGGGACGGGAAACTCGGACTCCTGGTGGCCGAGGTCCTGG
CGAGGCGAGGGGCCGCCGCCGCCGCAACATCAACGGCGAGAGCAGCAGGC
TCCGATTCCGGGAGCGCGGGGACCGGAGGAGATGTATCGGGTGCGGTCGG
AACTACAACTCTGATCGGCCGGCACGCGAAGAAGATGGACATATGCTGCC
GCCTGCCCGATACGGAGGGCGGCGGTGGAGAGGATTCCATTGGAAACGCA
ACGCCACGCCTGGTTCGCGTTGCCGCCGGAGAGGCTCAAGCGAATCTGGC
CGGGAAGTTCGATGTTGTCGTCGATGCCACGGGCAGCCCTTCCGGTTTGG
CGGCCGCATCCGAGCTCTGTCGGCCGATGGGCAACATCAACGGCGAGAGC
AGCAGGCTCCGATTCCGGGAGCGCGGGGACCGGAGGAGATGTATCGGGTG
CGGTCGGAACTACAACTCTGATCGGCCGGCACGCGAAGAAGATGGACATA
TGCTGCCGCCTGCCCGATACGGAGGGCGGCGGTGGAGAGGATTCCATTGG
AAACGCAACGCCACGCCTGGTTCGCGTTGCCGCCGGAGAGGCTCAAGCGA
ATCTGGCCGGGAAGTTCGATGTTGTCGTCGATGCCACGGGCAGCCCTTCC
GGTTTGGCGGCCGCATCCGAGCTCTGTCGGCCGATGGGGACGGTCGTACT
GAAGTCTACCTGCGCAACGGGAGCCGGCTTCAACCCCGCCCCCGTTGTGA
TCAACGAGCAAAGAATAGTCGGCTCTAGGTGCGGCCCTTTCGAGGCCGCG
CTGCGCCTGCTGGCGGAGACTGAGGGGCGCATCGACATCGAGCGCTACGT
TTCAGGACGGTCGTACTGAAGTCTACCTGCGCAACGGGAGCCGGCTTCAA
CCCCGCCCCCGTTGTGATCAACGAGCAAAGAATAGTCGGCTCTAGGTGCG
GCCCTTTCGAGGCCGCGCTGCGCCTGCTGGCGGAGACTGAGGGGCGCATC
GACATCGAGCGCTACGTTTCAGGGGTATTCACCTTGGAAGAAGCCGCCGC
GGCCATGGAGTGCGCTAACAAGAAGGGCGCCCTAAAGGTGCAGATAATAT
GCTCTGAGGCTGCTGGTGGCGGAAAGTGAGGGTATTCACCTTGGAAGAAG
CCGCCGCGGCCATGGAGTGCGCTAACAAGAAGGGCGCCCTAAAGGTGCAG
ATAATATGCTCTGAGGCTGCTGGTGGCGGAAAGTGA
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