mRNA_P-fluviatile_contig11.1194.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE) HSP 1 Score: 237 bits (604), Expect = 6.770e-74 Identity = 112/142 (78.87%), Postives = 122/142 (85.92%), Query Frame = 1
Query: 415 EGDWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRDPGSPTGWTIVEHHSSSMPHSPDELKHV 840
EGD +GVE+TT+RW E V LGTPD PR+TADLYA D VLWGTVSEEVRDTPEEIYDYFDYFARLP LRLSEFTP + RVYGDFAT+AGTYTF W+GE+G + KRARFSF FR DP SPT WTIVEHHSSSMP SP +LKHV
Sbjct: 101 EGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLKHV 242
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.780e-61 Identity = 102/141 (72.34%), Postives = 119/141 (84.40%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRD-PGSPTGWTIVEHHSSSMPHSPDELKHV 840
D + V +TT+ W +TV LGT D P++TA LYAPDAVLWGTVSEEVR+TPE+IYDYFD+FARLP+LRL E+TPA RVYG+FA QAGTYTFAW+G++G+T KRARFSF FRR PGSP WTIVEHHSSSMP +P ELKHV
Sbjct: 322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHV 462
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE) HSP 1 Score: 208 bits (530), Expect = 3.370e-60 Identity = 100/141 (70.92%), Postives = 117/141 (82.98%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRD-PGSPTGWTIVEHHSSSMPHSPDELKHV 840
D + V TT+ W +TV LGT D P++TA LYAPDAVLWGTVSEEVR+TPE+IYDYFD+FARLP+LR+ E+TPA RVYG+FA +AGTYTFAW+GE+G+T KRARFSF FRR PGSP WTIVEHHSSSMP +P ELK V
Sbjct: 293 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPV 433
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI) HSP 1 Score: 209 bits (531), Expect = 4.860e-59 Identity = 108/169 (63.91%), Postives = 121/169 (71.60%), Query Frame = 1
Query: 337 NCASDGMHPENAPPPSSYVPTRNTCKEGDWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRD-PGSPTGWTIVEHHSSSMPHSPDELKHV 840
N D + AP P + P +E D V TTV W +TV GT D P++TA LYA D VLWGTVSEEVRDTPE+IY YFDYFARLPELRL E+TP A RVYGDFA QAGTYTFA++G +G T KRARFSF FRRD P SPT WTIVEHHSSSMP++P LK V
Sbjct: 105 NLEEDEEYAAGAPEPEAPAPPAAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRV 273
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE) HSP 1 Score: 214 bits (545), Expect = 9.510e-59 Identity = 109/170 (64.12%), Postives = 126/170 (74.12%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRD-PGSPTGWTIVEHHSSSMPHSPDELKHVMHGGTVVF*MLLRQEGRRVCAMLWEGPSE 927
D + V +TT+ W TV LGT D P++TA LYA DAVLWGTVSEEVR+TPE+IYDYFD+FARLP+LRL E+TPA RVYG FA QAGTYTFAW+G +GET KRARFSF FRRD P SPT WTIVEHHSSSMP +PD LK V + V ++ +E V A E P E
Sbjct: 1417 DMKAVSETTIVWKNTVTLGTEDAPKKTAALYAEDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPARVYGQFAVQAGTYTFAWQGNDGETVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPSAPDGLKRVENDPAAVMDDVVVEEAPAVVAA--EEPEE 1584
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI) HSP 1 Score: 207 bits (527), Expect = 1.460e-58 Identity = 100/141 (70.92%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRD-PGSPTGWTIVEHHSSSMPHSPDELKHV 840
D + V TT+ W +TV LGT D P++TA LYA DAVLWGTVSEEVR+TPE+IYDYFD+FARLP+LRL E+TPA RVYG FA +AGTYTFAW+G++G+T KRARFSF FRRD PGSP WTIVEHHSSSMP +P ELK V
Sbjct: 287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKPV 427
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE) HSP 1 Score: 203 bits (517), Expect = 8.240e-58 Identity = 98/143 (68.53%), Postives = 108/143 (75.52%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRDPGSPTGWTIVEHHSSSMPHSPDELKHVMHG 849
D + V T V W +TV +GT D PR+TADLYA DA LWGTVSEEVRDTPE+IY YFDYFARLP LRL E+TP A RVYGDFA QAGTYTF+W+ +G T KRARFSF FRRDP P W IVEHHSSSMP +P LK M G
Sbjct: 186 DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGTTVEKRARFSFTFRRDPSKPQQWAIVEHHSSSMPTAPAGLKPAMSG 328
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI) HSP 1 Score: 204 bits (520), Expect = 4.690e-57 Identity = 98/143 (68.53%), Postives = 109/143 (76.22%), Query Frame = 1
Query: 421 DWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRRDPGSPTGWTIVEHHSSSMPHSPDELKHVMHG 849
D + V T V W +TV +GT D PR+TADLYA DA LWGTVSEEVRDTPE+IY YFDYFARLP LRL E+TP A RVYGDFA QAGTYTF+W+ +G+T KRARFSF FRRDP P W IVEHHSSSMP +P LK M G
Sbjct: 331 DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPAMSG 473
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.900e-51 Identity = 95/153 (62.09%), Postives = 111/153 (72.55%), Query Frame = 1
Query: 415 EGDWQGVEKTTVRWAETVVLGTPDGPRETADLYAPDAVLWGT------------VSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWKGENGETQTKRARFSFAFRR-DPGSPTGWTIVEHHSSSMPHSPDELK 834
E + + V +TT+ W ETV GT D P+ TA+LYAPDA+LWGT VSE VRDTPE+IY YFDYFARLPEL++ E+TPA RVYGDFA QAG+YTF+W+G +G T RARFSF FRR P SP WTIVEHHSSSMP SP EL+
Sbjct: 206 EEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 358
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Match: A0A836CEG0_9STRA (DUF4440 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG0_9STRA) HSP 1 Score: 167 bits (423), Expect = 4.090e-48 Identity = 80/134 (59.70%), Postives = 98/134 (73.13%), Query Frame = 1
Query: 439 KTTVRWAETVVLGTPDGPRETADLYAPDAVLWGTVSEEVRDTPEEIYDYFDYFARLPELRLSEFTPAAERVYGDFATQAGTYTFAWK-GENGETQTKRARFSFAFRRDPGSPTGWTIVEHHSSSMPHSPDELKH 837
+TT W TV GT + R+TA LYAPD VLWGT+SEEVRDTP EI+DYFDYFA P LR+S + P RV GD A G YTF W G +G T +KRAR+SF +RRDP +PTGWTI++HHSS+MP +P +L+H
Sbjct: 4 RTTDLWLRTVTSGTANAARDTAQLYAPDGVLWGTLSEEVRDTPAEIFDYFDYFANKPHLRVSGYRPLI-RVDGDVALNTGYYTFTWDDGSSGGTASKRARYSFVYRRDPLAPTGWTIIDHHSSAMPDAPAKLRH 136 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig11.1194.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig11.1194.1 >prot_P-fluviatile_contig11.1194.1 ID=prot_P-fluviatile_contig11.1194.1|Name=mRNA_P-fluviatile_contig11.1194.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=223bp MGLSSDAGPGVKAAMILGAGAAAAAAAAAGAAVSLRWMQQRPSKSCNCASback to top mRNA from alignment at P-fluviatile_contig11:2416146..2419692- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig11.1194.1 ID=mRNA_P-fluviatile_contig11.1194.1|Name=mRNA_P-fluviatile_contig11.1194.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3547bp|location=Sequence derived from alignment at P-fluviatile_contig11:2416146..2419692- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig11:2416146..2419692- >mRNA_P-fluviatile_contig11.1194.1 ID=mRNA_P-fluviatile_contig11.1194.1|Name=mRNA_P-fluviatile_contig11.1194.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1338bp|location=Sequence derived from alignment at P-fluviatile_contig11:2416146..2419692- (Porterinema fluviatile SAG_2381)back to top |