prot_P-fluviatile_contig56.12036.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig56.12036.1
Unique Nameprot_P-fluviatile_contig56.12036.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length640
Homology
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 678 bits (1749), Expect = 5.360e-233
Identity = 334/478 (69.87%), Postives = 383/478 (80.13%), Query Frame = 0
Query:  165 VMTIPTSCSSSTARPTFRYAATTGNGGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSM-FHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGGCVEGSPKF--TSGSDSIPKC 639
            +M I +SC     RP+FRYAA++G  GRLYAEG+GCFTMTDLY +RGT + G   S KGP+YMLD    KL   S +T  WLL AEL+ITGG +FYCKG+ AGGDC++LRI+STGS  FHEVRGHGGS+YFE TIVTSWDTPNK+PQ  Y  GRSFLNCVSEKLTG+ CEG AKN MGECRMD+INSEI YLGYFDSESYG+TWKVRG+CKD SN +VF+ TNVYGD+ G DIHH YYGHY+YGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIA NEVYNNVNHGIIASKRCNN KI+ N +RDGGA AAGIFLHRSSD A V+ N ITNMQDAGIAMLE+F+A+I+ N I+GAKYGIR+SLGS +N++Y NSF  I+    GLYTY+GSD PDVS+GRPS N    N +V D  +GVKI +GD N F  N FI    FEFP+ST+T W GND+G GC+E   +F   SGSDSIP C
Sbjct:  414 LMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG---SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQ--YGLYTYEGSDEPDVSDGRPSGNVLALN-LVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDGCIEEDDEFDAASGSDSIPIC 885          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 575 bits (1481), Expect = 9.530e-198
Identity = 308/545 (56.51%), Postives = 365/545 (66.97%), Query Frame = 0
Query:   87 GVQKDEYCCPAGCGTCGGSGCGSRGPGLGVEDCCTSRIRDSGVICGK---APCILSGGSPTPTPXXXXXXXXXXXXXXXTPVMTIPTSCSSSTARPTFRYAATTGNGGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSM-FHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPD--VSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGG-CVE 624
            GVQ +  CC   CGTCGGS C  RG GLG  DCC + I  +G +C +   APCI+                                                TGN     AEG+GCFT+TDLY +R  + S G  S KGPI+ LD S+N +     ++ KWLL AEL ITGGA+FYC+GS  GGDCDELRI+STG   FHEVR HGGSMYFESTIVTSWDTPNK PQ+ Y GGRSFLNCVSEKLTGE C G A+N MGECRMD+INSEIGYLGYFDSESYG+TWKVRG+CKD SN DVFD TNVYG++ G DIHHNYYG Y+YGHQGGVW NN+MHDN QYGFDPHDDSDYLT             IIASKRCNN +IYNN + DGG  AAGIFLHRSSDYA V+ N + +MQDAG+AMLE+ NA I++N+    K+GIRLSLGS+ N +++N F+ +++  QGLYTY+GSD P   VS+GRPS N FE+N I+ +   GVKI +GD      N F      EF D+ +T WKGN +  G C++
Sbjct:   18 GVQSENICCHVDCGTCGGSECRRRGKGLGAADCCRNYISKNGALCSENLSAPCIMDD---------------------------------------------VTGN--TPDAEGEGCFTITDLYNFR--LESDG--SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVST--QGLYTYQGSDEPTDGVSDGRPSDNLFENNRIL-NVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIK 496          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 568 bits (1463), Expect = 6.550e-196
Identity = 282/441 (63.95%), Postives = 334/441 (75.74%), Query Frame = 0
Query:  195 AEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTG-SMFHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVR---------GYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGG-CVE 624
            AE +GCFT+TDLY +RGT + G   S KGP+YMLD S +K+T  ++VTKKWLLEAEL++T GAIFYC GS+ GGDCDELRI+STG   ++EVRGHGGSMYF  T+VTSWDTPNK+PQ  Y GGRSFLNCVSEKLTGE C+G AKN+MGECRMD+INSE+GY+G+FDSESYG+TWKVR         G+CKD SN DVF+ TNVYGDIK  DIHH YYGHY+YGHQGGVWTNN+MHDN QY            +ANN+VYNN NHGIIASKRCNN KIY+N + DGG  A GIFLHRSSD AEVYGNKI NM DAGIA+LE+FNA IHDN+IDG ++GIR+SLGS  N +YDN F   +    GLYTY GSD PDVSNGRP+ N+F +N++  + A GVK    D      N+F      EF D+ +TTW GN +  G C++
Sbjct:   17 AESEGCFTLTDLYNFRGTENDG---SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSD--WGLYTYMGSDEPDVSNGRPNGNTFNNNKVT-NSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCID 439          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 520 bits (1339), Expect = 2.020e-177
Identity = 259/424 (61.08%), Postives = 309/424 (72.88%), Query Frame = 0
Query:  196 EGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIEST-GSMFHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDV 618
            +G GCFT++DLY W+G  ++G   + KGP+++LDS+     T +  T KWLL A+LF+TGGA  YC+G   GG+C ELRI ST GS F E+RGHGG++YFE TIVTSWD   +KPQ  Y  GRSF+ CVSE LTGE  +  A NNMGECRMD+I+SE+GYLGY  SE+YGITWKVRG+C D SN DVFD  NVYGD+KG DIHH YYG Y++GHQGGVWTNN MHDN QYGFDPHDDSDYL IA N+VYNNVNHGIIASKRCNN KIY+N + DGGA AAGIFLHRS D +EVYGN ITNM DAGIAMLE     IHDNQ+DG ++GIR+ LGS++NK++DN FK I +   G++TY GSD P V  GRP  N F +N I      GVKI + D  S   N F      EF ++    W GN +
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNG---NSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGE--DTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWN--VGMFTYVGSDEPWVGGGRPCDNEFYNNTIQAT-ETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSI 422          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 2.360e-170
Identity = 245/349 (70.20%), Postives = 275/349 (78.80%), Query Frame = 0
Query:  203 MTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSM-FHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWK--------VRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGIT 542
            MTDLY +RGT   G   S KGP+YMLD    KL   S +T  WLL AEL+ITGG +FYCKG+ AGGDC++LRI+STGS  FHEVRGHGGS+YFE TIVTSWDTPNK+PQ  Y GGRSFLNCVSEKLTG+ CEG AKN MGECRMD+INSEI YLGYFDSESYG+TWK        VRG+CKD SN +VFD TNVYGD+ G DIHH YYGHY+YGHQGGVWTNNKMHDNWQYGFDPHDDSDYLT             IIASKRCNN KI+ N +RDGGA A GIFLHRSSD A V+ N ITNMQDAGIA+LEAF+A+I+ N I+GAKYGIR+SLGS +N +Y NSF  I+
Sbjct:    1 MTDLYNFRGTEKDG---SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDIS 334          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 481 bits (1237), Expect = 1.390e-156
Identity = 308/627 (49.12%), Postives = 378/627 (60.29%), Query Frame = 0
Query:   22 CTRAGCKTCGGTGCSSRNG-LTAADCCTSTITAAAKPCGSAPCLLTGG-SPSXXXXXXXXXXSGVCNGVQKDEYCCPAGCGTCGGSGCGSRGPGLGVEDCCTSRIRDSGVICGKAPCILSGGSPTPTPXXXXXXXXXXXXXXXTPVMTIPTSCSSSTARPTFRYAATTGNGGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTT---DSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSMFHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGE--KCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVS--NGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGGCVEGSPKFTSGSDSIPKC 639
            C  AGC  CGG+GCS R G LT ADCCTS I+      G+APC++ G  SP+XXXXXXXX  S  C+GV K +YCC AGCG CGG        GL   DCCTS I +   + G APCI+ G S  PTP  XXXXXXXXXXXXX        S S+S+   +F               G GC T+TD+Y  +         S  GP+Y+LDSS+N ++     ++ T  WLL + L I  G   Y  G+ AGGD D LRI+ST   F E+RG GGS+ F  T VTSWDT   + +++Y GGRSF+NCV++    +   C G +    GECRMD+I+S +G +G+FD+ESYG+TWKVRG C D SN ++ D  NVYGDIKG +I+  YYG Y+YGHQGGVWT+N M DN  YGFDPHDDSD LTIA N VY N NHGIIASKRCNN +IY                                      A++E+F A+I+DN I+  KYGIRLSLGSA N I+DN+F   +S   GLYTYKGSD PDVS  +GR   NSF+ N I  +  + +KI +GD NSF  N F     FEF DST T W  ND+GGGC++ S  F SGS  IP C
Sbjct:  249 CCSAGCVECGGSGCSDRGGGLTGADCCTSDISNLCSVTGAAPCIVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCGECGGXXXXXXXXGLTGADCCTSDISNLCSVTGAAPCIVDGDSTGPTPTPXXXXXXXXXXXXXXXXXGTIASISTSSDSSSF--------------SGGGCATLTDMYNTQ---------SGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQSTDDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFD--SSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTI-SNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIGGGCLDESTDFASGS--IPSC 845          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 1.110e-142
Identity = 224/400 (56.00%), Postives = 262/400 (65.50%), Query Frame = 0
Query:  227 MLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTG-SMFHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGG-CVE 624
            MLD S NK+T+ ++VTKKWLLE+EL++T GAIFYC GS+ GGDCDELRI+STG   ++EVRGHGGSMYF  T+VTSWDTPNKKPQ  Y GGRSFLNCVSEKLTGE C+G AKN+ GECRMD+INSE+GY+G+FD+ESYG+TWKVRG+CKD SN DVF+ TNVYGDIK  +IHH YYG Y+YGHQGGVWTNN+MHDN QYGFDPHDDSDYLTIA             ASKRCNN +IYNN + DGG +A GIFLHRSSD AEVYG                                                         G       DAPDVSNGRP+ N+F +N+I  + A GVKI   D      N F      EF D+ +TTW  N +  G C++
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG---------------------------------------------------------GXXXXXXXDAPDVSNGRPNGNTFNNNKIT-NTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCID 342          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 6.900e-141
Identity = 245/489 (50.10%), Postives = 310/489 (63.39%), Query Frame = 0
Query:  163 TPVMTIPTSC-SSSTARPTFRYAATTGNGGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSMFHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTGE--KCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCK-DGSNG-----DVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDV--SNGRPSKNSFEDNEIVCDGA-LGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGGCVEGSPKFTSGSDSIPKC 639
            TP  +  TSC S++T R T   A         Y EG GC T+T +Y+              GP+Y+LD +++        T  WLL+  L +  G+     G+ A GD D LR+ ST   F EVRG+GG+++F+ST VTSWDT N + +     GRSF+NCV++        C+G +    GECRMD+I+S +G +G+FD+ESYG+TWKVRG C+ D   G     ++F+  NVYGDI   +I+  YYGHY+YGHQGGVW +N M DN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCNN KI+NN + DGG  A GIFLHRSSD AEV+ N + NMQDAG+AM+E+++A I+DN     +YGIRLSLGS  N I +N F GIT    GLYTY GSD PDV  SNGRPS N F+ N I  DG  +GV I +GD N F+ N F     +EF DS+ TTW  N  GGGC++GS  F  G   I +C
Sbjct:  169 TPTPSATTSCDSAATVRFTDDIA---------YFEGGGCGTLTQMYE---------AQEGDGPLYVLDENND--VVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQ--YGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN-TGGGCLDGSTDFAEGG--ITEC 632          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 1.120e-139
Identity = 282/670 (42.09%), Postives = 346/670 (51.64%), Query Frame = 0
Query:   21 ACTRAGCKTCGGTGCSSR-NGLTAADCCTSTITAAAKPC---GSAPCLLTGGSP---SXXXXXXXXXXSGVCNGVQKD---------------EYCC---------------PAGCGTCGGSGCGSRGPGLGVEDCCTSRIRDSGVIC---GKAPCILSGGS-------PTPTPXXXXXXXXXXXXXXXTPVMTIPTSCSSSTARPTFRYAATTGNGGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTK---KWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSMFHEVRGHGGSMYFESTIVTSWDTPN-KKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCGRFEFPDSTSTTWKGNDVGGGCVEGSPKFTSGSDSIPKC 639
            AC  + C TCGG+GCSSR +GLT  DCCT  I     PC   G APC L G S    S           G  N   +                E C                 AGCGTCGG+GC  R PGL   DCC  +I +SG +C   GKAPC + G S       P P+P    XXXXXX     TP   +P+ C +       +  A        Y +  GC T+TDLY               GP+++LDS+ NK+       K   +WLL + + I   A  + +G   GGDCD LRIESTGS + E+ GHGG+MYFE T VTSWDT   K+ + K + GRSF+ C+++      C G +  +MG CRMD+I+S +G +GY  SESYG+TWKVRG CK+ SN  +FDK NVYGDIK  DI+  YYG Y+YGH+GGVWTNNKMHDN QYGFDPHDDSD L IA+N                                                            A LE+F+A I+DN+I   KYGIRLSLGS  N I +N+F  I+    GLYTYKGSD+PDVSNGRP  N FE N  V +  +GV   +GD N F  N F     FEF  S  T W GN +GGGC++    FT GSD+IP C
Sbjct:   33 ACCVSDCGTCGGSGCSSRESGLTGDDCCTKNILKQGAPCSATGHAPCFLDGDSTPSKSTPTESDGFVYEGCFNDKPEPDRLFSYVTTMDDMTTELCANECKGYAFFGLQWGREAGCGTCGGTGCSQR-PGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTA--------YFKSGGCATLTDLYN---------AQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSKYWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDDNYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISK--YGLYTYKGSDSPDVSNGRPKGNKFEGN-TVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLGGGCLDRGKDFTKGSDTIPDC 679          
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 7.570e-127
Identity = 221/460 (48.04%), Postives = 292/460 (63.48%), Query Frame = 0
Query:  190 GGRLYAEGKGCFTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAELFITGGAIFYCKGSKAGGDCDELRIESTGSM-FHEVRGHGGSMYFESTIVTSWDTPNKKPQSKYSGGRSFLNCVSEKLTG--EKCEGAAKNNMGECRMDMINSEIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNYYGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGIAMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYTYKGSDAPDVS---NGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKCG---RFEFPDSTSTTWKGNDVGGG-CVEGSPK--FTSGSDSIP 637
            GG+ Y  G GC T+TD+Y      + GG  +  GP+++LDS+ N      + T  WLL  ++ +  G++    G  AGGD   LRI+STGS  ++E+RGHGGS+ F  T VTSWDT  KK  + Y   RSF+ CVSE+L    + C+G A N+MGECRMD+I SE+G +GY  +ESYGI+WKVRGYC +  N +VF++T V GDI   DI+  YYGHY++GH GG+WT NKMHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNN KI++N + DGG  A GIFLHRSSD  EV+GN + +M+DAG+A++E+  A IHDN     KYGIRLS+G+A N + +NSF  +  D  G+YTY+G+D P+ S   +G    N+F  N +      GVKI + +G  F  N F +      + F D     W  N V    C++G     +    DS+P
Sbjct:  397 GGKNYIRGGGCATLTDIY-----TAQGG-HNDDGPLFVLDSNDN--VVGGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSF--LECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG----GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLP 842          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.12036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI5.360e-23369.87Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI9.530e-19856.51Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE6.550e-19663.95MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI2.020e-17761.08Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE2.360e-17070.20MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FWE8_ECTSI1.390e-15649.12Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FIU4_ECTSI1.110e-14256.00Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI6.900e-14150.10Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LRN0_ECTSI1.120e-13942.09Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE7.570e-12748.04MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 456..480
e-value: 7.0
score: 15.6
coord: 587..620
e-value: 6900.0
score: 1.2
coord: 564..586
e-value: 4300.0
score: 2.7
coord: 386..416
e-value: 1700.0
score: 5.6
coord: 482..504
e-value: 640.0
score: 8.6
coord: 432..454
e-value: 5.9
score: 15.9
coord: 528..552
e-value: 6700.0
score: 1.3
coord: 505..526
e-value: 100.0
score: 11.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 218..562
e-value: 9.5E-87
score: 293.4
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 390..540
e-value: 6.3E-16
score: 58.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..639
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.652
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 376..601

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig56contigP-fluviatile_contig56:739893..746572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig56.12036.1mRNA_P-fluviatile_contig56.12036.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig56 739501..747828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig56.12036.1 ID=prot_P-fluviatile_contig56.12036.1|Name=mRNA_P-fluviatile_contig56.12036.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=640bp
MLVCNFSVVFFVLNVVTNTPACTRAGCKTCGGTGCSSRNGLTAADCCTST
ITAAAKPCGSAPCLLTGGSPSPSPPTPTPTPSGVCNGVQKDEYCCPAGCG
TCGGSGCGSRGPGLGVEDCCTSRIRDSGVICGKAPCILSGGSPTPTPPTP
SPPSPSPPSSSPTPVMTIPTSCSSSTARPTFRYAATTGNGGRLYAEGKGC
FTMTDLYKWRGTVSSGGVTSPKGPIYMLDSSHNKLTTDSAVTKKWLLEAE
LFITGGAIFYCKGSKAGGDCDELRIESTGSMFHEVRGHGGSMYFESTIVT
SWDTPNKKPQSKYSGGRSFLNCVSEKLTGEKCEGAAKNNMGECRMDMINS
EIGYLGYFDSESYGITWKVRGYCKDGSNGDVFDKTNVYGDIKGCDIHHNY
YGHYTYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIANNEVYNNVNHGI
IASKRCNNAKIYNNVIRDGGAQAAGIFLHRSSDYAEVYGNKITNMQDAGI
AMLEAFNAKIHDNQIDGAKYGIRLSLGSASNKIYDNSFKGITSDGQGLYT
YKGSDAPDVSNGRPSKNSFEDNEIVCDGALGVKINQGDGNSFLGNKFIKC
GRFEFPDSTSTTWKGNDVGGGCVEGSPKFTSGSDSIPKC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR007742NosD_dom
IPR011050Pectin_lyase_fold/virulence